Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0697
         (477 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4J5P2 Cluster: Putative uncharacterized protein; n=1; ...    33   2.5  
UniRef50_Q3JTS1 Cluster: Putative uncharacterized protein; n=1; ...    32   5.7  
UniRef50_Q1DFH1 Cluster: Collagen triple helix repeat protein; n...    32   7.5  
UniRef50_Q67TR5 Cluster: Putative uncharacterized protein B1342C...    32   7.5  
UniRef50_Q9VQV6 Cluster: CG3964-PB, isoform B; n=4; Sophophora|R...    32   7.5  
UniRef50_A0VGV1 Cluster: Putative uncharacterized protein; n=1; ...    31   10.0 

>UniRef50_Q4J5P2 Cluster: Putative uncharacterized protein; n=1;
           Azotobacter vinelandii AvOP|Rep: Putative
           uncharacterized protein - Azotobacter vinelandii AvOP
          Length = 829

 Score = 33.5 bits (73), Expect = 2.5
 Identities = 22/45 (48%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +2

Query: 128 SMTCRASPGAAHVQRSAGG--GRAACRSHGWWCGRRCVALPTPSS 256
           S TCR + G    +RS  G  GR A RS G WCG R  A   PSS
Sbjct: 771 STTCRTA-GRPPRRRSPCGRPGRCAPRSSGSWCGPRSSANARPSS 814


>UniRef50_Q3JTS1 Cluster: Putative uncharacterized protein; n=1;
           Burkholderia pseudomallei 1710b|Rep: Putative
           uncharacterized protein - Burkholderia pseudomallei
           (strain 1710b)
          Length = 475

 Score = 32.3 bits (70), Expect = 5.7
 Identities = 18/41 (43%), Positives = 21/41 (51%)
 Frame = +2

Query: 107 RLYCDQRSMTCRASPGAAHVQRSAGGGRAACRSHGWWCGRR 229
           R YC   S  CRA+  + HV  +    R   RSHGW C RR
Sbjct: 427 RSYC-AASHACRATRASRHVFATV---RPLARSHGWRCWRR 463


>UniRef50_Q1DFH1 Cluster: Collagen triple helix repeat protein; n=1;
           Myxococcus xanthus DK 1622|Rep: Collagen triple helix
           repeat protein - Myxococcus xanthus (strain DK 1622)
          Length = 667

 Score = 31.9 bits (69), Expect = 7.5
 Identities = 18/43 (41%), Positives = 22/43 (51%)
 Frame = +2

Query: 143 ASPGAAHVQRSAGGGRAACRSHGWWCGRRCVALPTPSSFMASG 271
           A+P  A    SAGGG  AC  +G   G   +A P PS   A+G
Sbjct: 610 ANPTGASQAISAGGGGGACGGNGGSGGGGTLAAPQPSEAGAAG 652


>UniRef50_Q67TR5 Cluster: Putative uncharacterized protein
           B1342C04.11; n=3; cellular organisms|Rep: Putative
           uncharacterized protein B1342C04.11 - Oryza sativa
           subsp. japonica (Rice)
          Length = 286

 Score = 31.9 bits (69), Expect = 7.5
 Identities = 17/33 (51%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
 Frame = +2

Query: 140 RASPGAAHVQRSAGGGRAAC--RSHGWW-CGRR 229
           R S GA+   RSA GG   C  R  GWW C RR
Sbjct: 148 RRSRGASPPARSAAGGGGGCRRRRRGWWGCRRR 180


>UniRef50_Q9VQV6 Cluster: CG3964-PB, isoform B; n=4; Sophophora|Rep:
           CG3964-PB, isoform B - Drosophila melanogaster (Fruit
           fly)
          Length = 989

 Score = 31.9 bits (69), Expect = 7.5
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = -3

Query: 364 PYMSQEDFREAR*MISGPEHVGTLIGSIAHRPAGHKRTRRGQSD 233
           P  SQ  F   R  ISG +HV + +G   ++ AGH   R+ + D
Sbjct: 314 PQNSQPQFHSPR--ISGGDHVASYVGVSLNKGAGHDNDRKHEDD 355


>UniRef50_A0VGV1 Cluster: Putative uncharacterized protein; n=1;
           Delftia acidovorans SPH-1|Rep: Putative uncharacterized
           protein - Delftia acidovorans SPH-1
          Length = 232

 Score = 31.5 bits (68), Expect = 10.0
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
 Frame = +2

Query: 176 AGGGRAACRSHGWWCGRRCVAL----PTPSSFMASG 271
           AGG  AA     WWC R+CVA+    P  S+ + SG
Sbjct: 42  AGGMAAADPQRAWWCVRQCVAVLNRRPWRSAHLPSG 77


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 466,809,126
Number of Sequences: 1657284
Number of extensions: 8842694
Number of successful extensions: 25207
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 24491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25194
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26870548160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)