Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0695
(583 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 238 2e-63
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 228 2e-60
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 209 9e-55
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 209 9e-55
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 206 9e-54
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 179 2e-45
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 179 2e-45
M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein ( C.ele... 161 2e-40
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 161 2e-40
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 140 7e-34
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 77 1e-14
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 73 1e-13
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 73 1e-13
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 33 0.11
AF043702-6|AAK21497.2| 306|Caenorhabditis elegans Hypothetical ... 31 0.60
Z22179-1|CAA80169.1| 254|Caenorhabditis elegans Hypothetical pr... 29 2.4
AY125085-1|AAM94369.1| 1113|Caenorhabditis elegans regulatory cy... 28 5.6
AF024497-2|AAB70342.2| 1113|Caenorhabditis elegans Defective in ... 28 5.6
AC006834-4|AAF40012.1| 392|Caenorhabditis elegans Hypothetical ... 27 7.4
Z50874-4|CAD91698.1| 150|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z30317-5|CAA82971.4| 1890|Caenorhabditis elegans Hypothetical pr... 27 9.7
U29097-9|AAA68416.2| 343|Caenorhabditis elegans Hypothetical pr... 27 9.7
AF125450-4|AAD12818.1| 343|Caenorhabditis elegans Hypothetical ... 27 9.7
AF016682-7|AAB66191.2| 343|Caenorhabditis elegans Hypothetical ... 27 9.7
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 238 bits (582), Expect = 2e-63
Identities = 120/168 (71%), Positives = 126/168 (75%)
Frame = +1
Query: 79 PRVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGI 258
P+VQKLL D F+GKELNKSINPDE IL GDKSE VQD GI
Sbjct: 345 PKVQKLLSDLFSGKELNKSINPDEAVAYGAAVQAAILSGDKSEAVQDLLLLDVAPLSLGI 404
Query: 259 ETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTG 438
ETAGGVMT LIKRN YSDNQPGVLIQV+EGERAMTKDNNLLGKFEL+G
Sbjct: 405 ETAGGVMTALIKRNTTIPTKTAQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELSG 464
Query: 439 IPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLS 582
IPPAPRGVPQIEVTFDIDANGILNVSA +KST K+NKITITNDKGRLS
Sbjct: 465 IPPAPRGVPQIEVTFDIDANGILNVSATDKSTGKQNKITITNDKGRLS 512
Score = 47.6 bits (108), Expect = 6e-06
Identities = 20/23 (86%), Positives = 23/23 (100%)
Frame = +3
Query: 15 EAKMDKAQIHDIVLVGGSTRIPK 83
+AKMDK+Q+HDIVLVGGSTRIPK
Sbjct: 324 DAKMDKSQVHDIVLVGGSTRIPK 346
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 228 bits (558), Expect = 2e-60
Identities = 116/168 (69%), Positives = 122/168 (72%)
Frame = +1
Query: 79 PRVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGI 258
P+VQKLL D F+GKELNKSINPDE IL GDKSE VQD GI
Sbjct: 345 PKVQKLLSDLFSGKELNKSINPDEALAYGAAVQAAILSGDKSEAVQDLLLLDVAPLSLGI 404
Query: 259 ETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTG 438
ETAGGVMT LIKRN YSDNQPGVLIQV+EGERAMTKDNNLLGKFEL+G
Sbjct: 405 ETAGGVMTALIKRNTTIPTKTAQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELSG 464
Query: 439 IPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLS 582
IPPAPRGVPQIEVTFDIDANGILNVSA +KST K +ITITNDK R S
Sbjct: 465 IPPAPRGVPQIEVTFDIDANGILNVSATDKSTGKAKQITITNDKDRFS 512
Score = 47.6 bits (108), Expect = 6e-06
Identities = 20/23 (86%), Positives = 23/23 (100%)
Frame = +3
Query: 15 EAKMDKAQIHDIVLVGGSTRIPK 83
+AKMDK+Q+HDIVLVGGSTRIPK
Sbjct: 324 DAKMDKSQVHDIVLVGGSTRIPK 346
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 209 bits (511), Expect = 9e-55
Identities = 104/168 (61%), Positives = 119/168 (70%)
Frame = +1
Query: 79 PRVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGI 258
P++QKLL+DFFNGKELN SINPDE +L G K E ++D GI
Sbjct: 345 PKIQKLLKDFFNGKELNCSINPDEAVAFGAAVQAAVLSGVKDETIKDVLLVDVAPLSLGI 404
Query: 259 ETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTG 438
ETAGGVMT LI RN Y+DNQPGV IQV+EGERAMT+DN+ LG FEL+G
Sbjct: 405 ETAGGVMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEGERAMTRDNHRLGTFELSG 464
Query: 439 IPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLS 582
IPPAPRGVPQIEVTFDIDANGILNVSA +KST K N+ITI N+KGRL+
Sbjct: 465 IPPAPRGVPQIEVTFDIDANGILNVSAEDKSTGKSNRITIQNEKGRLT 512
Score = 39.1 bits (87), Expect = 0.002
Identities = 15/23 (65%), Positives = 22/23 (95%)
Frame = +3
Query: 15 EAKMDKAQIHDIVLVGGSTRIPK 83
+AK+DK++I ++VLVGGSTR+PK
Sbjct: 324 DAKLDKSKIDEVVLVGGSTRVPK 346
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 209 bits (511), Expect = 9e-55
Identities = 104/168 (61%), Positives = 119/168 (70%)
Frame = +1
Query: 79 PRVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGI 258
P++QKLL+DFFNGKELN SINPDE +L G K E ++D GI
Sbjct: 345 PKIQKLLKDFFNGKELNCSINPDEAVAFGAAVQAAVLSGVKDETIKDVLLVDVAPLSLGI 404
Query: 259 ETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTG 438
ETAGGVMT LI RN Y+DNQPGV IQV+EGERAMT+DN+ LG FEL+G
Sbjct: 405 ETAGGVMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEGERAMTRDNHRLGTFELSG 464
Query: 439 IPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLS 582
IPPAPRGVPQIEVTFDIDANGILNVSA +KST K N+ITI N+KGRL+
Sbjct: 465 IPPAPRGVPQIEVTFDIDANGILNVSAEDKSTGKSNRITIQNEKGRLT 512
Score = 39.1 bits (87), Expect = 0.002
Identities = 15/23 (65%), Positives = 22/23 (95%)
Frame = +3
Query: 15 EAKMDKAQIHDIVLVGGSTRIPK 83
+AK+DK++I ++VLVGGSTR+PK
Sbjct: 324 DAKLDKSKIDEVVLVGGSTRVPK 346
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 206 bits (503), Expect = 9e-54
Identities = 100/168 (59%), Positives = 119/168 (70%)
Frame = +1
Query: 79 PRVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGI 258
P++QKLL++FFNGK+LN SINPDE +L G K + ++D GI
Sbjct: 345 PKIQKLLKEFFNGKDLNCSINPDEAVAFGAAVQAAVLSGVKDDTIKDVLLVDVVPLSHGI 404
Query: 259 ETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTG 438
ETAGGVMT LI RN Y+DNQPGV IQV+EGERAMT+DN+ LG FELTG
Sbjct: 405 ETAGGVMTNLIDRNTRIPAKASKTFTTYADNQPGVSIQVYEGERAMTRDNHRLGTFELTG 464
Query: 439 IPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLS 582
IPPAPRGVPQ++VTFDIDANGILNVSA +KST + N+ITI N+KGRLS
Sbjct: 465 IPPAPRGVPQVDVTFDIDANGILNVSAADKSTGRSNRITIRNEKGRLS 512
Score = 37.9 bits (84), Expect = 0.005
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = +3
Query: 15 EAKMDKAQIHDIVLVGGSTRIPK 83
+AK DK +I ++VLVGGSTRIPK
Sbjct: 324 DAKTDKGRIDEVVLVGGSTRIPK 346
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 179 bits (435), Expect = 2e-45
Identities = 90/168 (53%), Positives = 112/168 (66%)
Frame = +1
Query: 79 PRVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGI 258
P+VQ+L+++FFNGKE ++ INPDE ++ G+ E+ + GI
Sbjct: 374 PKVQQLIKEFFNGKEPSRGINPDEAVAYGAAVQGGVISGE--EDTGEIVLLDVNPLTMGI 431
Query: 259 ETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTG 438
ET GGVMT LI RN +DNQP V IQVFEGER MTKDN+ LGKF+LTG
Sbjct: 432 ETVGGVMTKLIGRNTVIPTKKSQVFSTAADNQPTVTIQVFEGERPMTKDNHQLGKFDLTG 491
Query: 439 IPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLS 582
+PPAPRGVPQIEVTF+ID NGIL+V+A +K T +NKITITND+ RLS
Sbjct: 492 LPPAPRGVPQIEVTFEIDVNGILHVTAEDKGTGNKNKITITNDQNRLS 539
Score = 35.5 bits (78), Expect = 0.028
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +3
Query: 6 IRHEAKMDKAQIHDIVLVGGSTRIPK 83
+ ++ + K +H+IVLVGGSTRIPK
Sbjct: 350 VLEDSDLKKDDVHEIVLVGGSTRIPK 375
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 179 bits (435), Expect = 2e-45
Identities = 90/168 (53%), Positives = 112/168 (66%)
Frame = +1
Query: 79 PRVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGI 258
P+VQ+L+++FFNGKE ++ INPDE ++ G+ E+ + GI
Sbjct: 374 PKVQQLIKEFFNGKEPSRGINPDEAVAYGAAVQGGVISGE--EDTGEIVLLDVNPLTMGI 431
Query: 259 ETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTG 438
ET GGVMT LI RN +DNQP V IQVFEGER MTKDN+ LGKF+LTG
Sbjct: 432 ETVGGVMTKLIGRNTVIPTKKSQVFSTAADNQPTVTIQVFEGERPMTKDNHQLGKFDLTG 491
Query: 439 IPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLS 582
+PPAPRGVPQIEVTF+ID NGIL+V+A +K T +NKITITND+ RLS
Sbjct: 492 LPPAPRGVPQIEVTFEIDVNGILHVTAEDKGTGNKNKITITNDQNRLS 539
Score = 35.5 bits (78), Expect = 0.028
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +3
Query: 6 IRHEAKMDKAQIHDIVLVGGSTRIPK 83
+ ++ + K +H+IVLVGGSTRIPK
Sbjct: 350 VLEDSDLKKDDVHEIVLVGGSTRIPK 375
>M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein (
C.elegans heat shockprotein 4 gene, 3' end. ).
Length = 288
Score = 161 bits (392), Expect = 2e-40
Identities = 83/168 (49%), Positives = 104/168 (61%)
Frame = +1
Query: 79 PRVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGI 258
P+VQ+L++D+FNGKE ++ INPDE ++ G E D GI
Sbjct: 2 PKVQQLIKDYFNGKEPSRGINPDEAVAYGAAVQAGVIGG--VENTGDVVLLDVNPLTLGI 59
Query: 259 ETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTG 438
ET GGVMT LI RN +D+Q V I ++EGER M DN+ LG F++TG
Sbjct: 60 ETVGGVMTKLIGRNTVIPTKKSQVFPTAADSQSAVSIVIYEGERPMVMDNHKLGNFDVTG 119
Query: 439 IPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLS 582
IPPAPRGVPQIEVTF+ID NGIL+VSA +K T +NK+TITND RLS
Sbjct: 120 IPPAPRGVPQIEVTFEIDVNGILHVSAEDKGTGNKNKLTITNDHNRLS 167
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 161 bits (392), Expect = 2e-40
Identities = 83/168 (49%), Positives = 104/168 (61%)
Frame = +1
Query: 79 PRVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGI 258
P+VQ+L++D+FNGKE ++ INPDE ++ G E D GI
Sbjct: 371 PKVQQLIKDYFNGKEPSRGINPDEAVAYGAAVQAGVIGG--VENTGDVVLLDVNPLTLGI 428
Query: 259 ETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTG 438
ET GGVMT LI RN +D+Q V I ++EGER M DN+ LG F++TG
Sbjct: 429 ETVGGVMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEGERPMVMDNHKLGNFDVTG 488
Query: 439 IPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLS 582
IPPAPRGVPQIEVTF+ID NGIL+VSA +K T +NK+TITND RLS
Sbjct: 489 IPPAPRGVPQIEVTFEIDVNGILHVSAEDKGTGNKNKLTITNDHNRLS 536
Score = 38.7 bits (86), Expect = 0.003
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +3
Query: 6 IRHEAKMDKAQIHDIVLVGGSTRIPK 83
+ +A M K +H+IVLVGGSTRIPK
Sbjct: 347 VLEDADMKKTDVHEIVLVGGSTRIPK 372
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 140 bits (339), Expect = 7e-34
Identities = 77/165 (46%), Positives = 95/165 (57%)
Frame = +1
Query: 79 PRVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGI 258
P+VQ +Q+ F GK +K++NPDE +L GD V D GI
Sbjct: 372 PKVQATVQEIF-GKVPSKAVNPDEAVAMGAAIQGAVLAGD----VTDVLLLDVTPLSLGI 426
Query: 259 ETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTG 438
ET GG+MT LI RN +D Q V I+VF+GER M N LLG+F L G
Sbjct: 427 ETLGGIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSNKLLGQFSLVG 486
Query: 439 IPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKG 573
IPPAPRGVPQ+EVTFDIDANGI+NVSA ++ T KE +I I + G
Sbjct: 487 IPPAPRGVPQVEVTFDIDANGIVNVSARDRGTGKEQQIVIQSSGG 531
Score = 32.7 bits (71), Expect = 0.20
Identities = 12/24 (50%), Positives = 20/24 (83%)
Frame = +3
Query: 12 HEAKMDKAQIHDIVLVGGSTRIPK 83
H+A++ +QI D++LVGG +R+PK
Sbjct: 350 HDAEVKSSQIADVLLVGGMSRMPK 373
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 76.6 bits (180), Expect = 1e-14
Identities = 47/121 (38%), Positives = 59/121 (48%)
Frame = +1
Query: 79 PRVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGI 258
P+VQ +Q+ F GK +K++NPDE +L GD V D GI
Sbjct: 372 PKVQATVQEIF-GKVPSKAVNPDEAVAMGAAIQGAVLAGD----VTDVLLLDVTPLSLGI 426
Query: 259 ETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTG 438
ET GG+MT LI RN +D Q V I+VF+GER M N LLG+F L G
Sbjct: 427 ETLGGIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSNKLLGQFSLVG 486
Query: 439 I 441
I
Sbjct: 487 I 487
Score = 33.1 bits (72), Expect = 0.15
Identities = 12/26 (46%), Positives = 21/26 (80%)
Frame = +3
Query: 6 IRHEAKMDKAQIHDIVLVGGSTRIPK 83
+ H+A++ +QI D++LVGG +R+PK
Sbjct: 348 VLHDAEVKSSQIADVLLVGGMSRMPK 373
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 72.9 bits (171), Expect = 1e-13
Identities = 46/156 (29%), Positives = 70/156 (44%)
Frame = +1
Query: 100 QDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVM 279
Q F + + +SI+PDE +L G +EEVQD G++ M
Sbjct: 349 QSFESNTRICESIHPDEAVAYGAAIMAAVLSG--AEEVQDMRLIDVIPMSIGVQCNRDYM 406
Query: 280 TTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRG 459
+ LIK+ D Q + + V+EGER + N LG+ L I P RG
Sbjct: 407 SVLIKKGTVFPCTKRKTFINSDDFQTSINVPVYEGERVLCSHNRQLGEISLP-IQPKRRG 465
Query: 460 VPQIEVTFDIDANGILNVSAIEKSTNKENKITITND 567
+++T ++D NGIL +A++ +T K TI D
Sbjct: 466 ESVVDITLEVDYNGILQATALDLNTKKAITTTILYD 501
Score = 36.7 bits (81), Expect = 0.012
Identities = 16/22 (72%), Positives = 20/22 (90%)
Frame = +3
Query: 15 EAKMDKAQIHDIVLVGGSTRIP 80
EA + K+QI++IVLVGGSTRIP
Sbjct: 320 EANLKKSQINEIVLVGGSTRIP 341
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 72.9 bits (171), Expect = 1e-13
Identities = 46/156 (29%), Positives = 70/156 (44%)
Frame = +1
Query: 100 QDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVM 279
Q F + + +SI+PDE +L G +EEVQD G++ M
Sbjct: 349 QSFESNTRICESIHPDEAVAYGAAIMAAVLSG--AEEVQDMRLIDVIPMSIGVQCNRDYM 406
Query: 280 TTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRG 459
+ LIK+ D Q + + V+EGER + N LG+ L I P RG
Sbjct: 407 SVLIKKGTVFPCTKRKTFINSDDFQTSINVPVYEGERVLCSHNRQLGEISLP-IQPKRRG 465
Query: 460 VPQIEVTFDIDANGILNVSAIEKSTNKENKITITND 567
+++T ++D NGIL +A++ +T K TI D
Sbjct: 466 ESVVDITLEVDYNGILQATALDLNTKKAITTTILYD 501
Score = 36.7 bits (81), Expect = 0.012
Identities = 16/22 (72%), Positives = 20/22 (90%)
Frame = +3
Query: 15 EAKMDKAQIHDIVLVGGSTRIP 80
EA + K+QI++IVLVGGSTRIP
Sbjct: 320 EANLKKSQINEIVLVGGSTRIP 341
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 33.5 bits (73), Expect = 0.11
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +3
Query: 15 EAKMDKAQIHDIVLVGGSTRIPKGAEAPARF 107
+A +D A + +IVLVGGST++P + RF
Sbjct: 355 DANLDTADVDEIVLVGGSTQVPAVRKIVGRF 385
>AF043702-6|AAK21497.2| 306|Caenorhabditis elegans Hypothetical
protein W03D8.2 protein.
Length = 306
Score = 31.1 bits (67), Expect = 0.60
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = -2
Query: 411 VVIFGHSTLTLKYLDEYSGLVIRVGGECLSLFSGDGSVTLDECGHDTSSS-LNTEGKGCY 235
+VI GH Y G V+R GG +SLFS L+ GH +SS L E G
Sbjct: 208 LVIRGHQLFKEMYPQ---GCVLRFGGRLISLFS-----ALNYEGHKNNSSVLKLEFVGQR 259
Query: 234 IKQQQILHLLR 202
+K +Q+L+ R
Sbjct: 260 VKVKQVLYRCR 270
>Z22179-1|CAA80169.1| 254|Caenorhabditis elegans Hypothetical
protein F58A4.1 protein.
Length = 254
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 7/54 (12%)
Frame = +2
Query: 8 SARGQDG*GSNPRYCTGGWLHSYPQG-------CRSSCKISLMERSSTNLLTLT 148
SA G G G P C G W +P+ C+ CK ++T++ T T
Sbjct: 19 SAIGYSGGGYQPHSCDGDWPEKFPEAPKGFQFRCKCPCKCPPKSPTTTSISTST 72
>AY125085-1|AAM94369.1| 1113|Caenorhabditis elegans regulatory
cytoplasmic polyA polymeraseprotein.
Length = 1113
Score = 27.9 bits (59), Expect = 5.6
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -2
Query: 117 SIKEILQELLHPWGYEWSHPPVQY-RGFEPYPS 22
S K I Q+ W + HPP Q+ RG +P P+
Sbjct: 237 SDKRIEQQQAEDWPTRFQHPPPQFRRGQDPMPA 269
>AF024497-2|AAB70342.2| 1113|Caenorhabditis elegans Defective in
germ line developmentprotein 2, isoform a protein.
Length = 1113
Score = 27.9 bits (59), Expect = 5.6
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -2
Query: 117 SIKEILQELLHPWGYEWSHPPVQY-RGFEPYPS 22
S K I Q+ W + HPP Q+ RG +P P+
Sbjct: 237 SDKRIEQQQAEDWPTRFQHPPPQFRRGQDPMPA 269
>AC006834-4|AAF40012.1| 392|Caenorhabditis elegans Hypothetical
protein ZK973.8 protein.
Length = 392
Score = 27.5 bits (58), Expect = 7.4
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Frame = -2
Query: 270 SSSLNTEGKGCYIKQQQILHLLRL--VTVQDSSLDSCTISY----GLVRVNRFVELLSIK 109
SS T C + ++ H++ + TV + SL + ++ G+ R R +E +
Sbjct: 10 SSDTITFVHSCQVPITEVNHMMPIHFATVHEYSLINWSLQISEAGGIPRFLRNLEPEPRE 69
Query: 108 EILQELLHPWGYEWSHPPV 52
+ Q LHP G S+PPV
Sbjct: 70 TVFQVTLHPVGQRDSYPPV 88
>Z50874-4|CAD91698.1| 150|Caenorhabditis elegans Hypothetical
protein R10E4.2c protein.
Length = 150
Score = 27.1 bits (57), Expect = 9.7
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 495 QRYPQRFRYREVHQQGEQDHHYQRQR 572
Q+ PQ+ + + QQG H YQ+QR
Sbjct: 13 QQQPQQGQAPQQQQQGPPQHQYQQQR 38
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 27.1 bits (57), Expect = 9.7
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 495 QRYPQRFRYREVHQQGEQDHHYQRQR 572
Q+ PQ+ + + QQG H YQ+QR
Sbjct: 13 QQQPQQGQAPQQQQQGPPQHQYQQQR 38
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 27.1 bits (57), Expect = 9.7
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 495 QRYPQRFRYREVHQQGEQDHHYQRQR 572
Q+ PQ+ + + QQG H YQ+QR
Sbjct: 13 QQQPQQGQAPQQQQQGPPQHQYQQQR 38
>Z30317-5|CAA82971.4| 1890|Caenorhabditis elegans Hypothetical
protein T16G12.1 protein.
Length = 1890
Score = 27.1 bits (57), Expect = 9.7
Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 3/29 (10%)
Frame = -2
Query: 84 PWGYEWSHP--PVQYRGFEPYPSW-PRAE 7
PW Y WS P R +PY W PR +
Sbjct: 579 PWNYTWSIPLTSANLRHADPYKQWLPRQQ 607
>U29097-9|AAA68416.2| 343|Caenorhabditis elegans Hypothetical
protein F18C5.7 protein.
Length = 343
Score = 27.1 bits (57), Expect = 9.7
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 422 LPSKLLSLVIARSPSNTW 369
+P+K+L+L I RSPS W
Sbjct: 26 IPTKMLALQIQRSPSTIW 43
>AF125450-4|AAD12818.1| 343|Caenorhabditis elegans Hypothetical
protein Y39F10A.4 protein.
Length = 343
Score = 27.1 bits (57), Expect = 9.7
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 422 LPSKLLSLVIARSPSNTW 369
+P+K+L+L I RSPS W
Sbjct: 26 IPTKMLALQIQRSPSTIW 43
>AF016682-7|AAB66191.2| 343|Caenorhabditis elegans Hypothetical
protein T07D3.8 protein.
Length = 343
Score = 27.1 bits (57), Expect = 9.7
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 422 LPSKLLSLVIARSPSNTW 369
+P+K+L+L I RSPS W
Sbjct: 26 IPTKMLALQIQRSPSTIW 43
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.315 0.136 0.396
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,699,166
Number of Sequences: 27780
Number of extensions: 257022
Number of successful extensions: 703
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 699
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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