Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0694
(579 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_13211| Best HMM Match : Extensin_2 (HMM E-Value=0.0053) 38 0.006
SB_42043| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.014
SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18) 33 0.17
SB_7865| Best HMM Match : Mucin (HMM E-Value=1.2) 33 0.17
SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13) 32 0.39
SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.51
SB_19195| Best HMM Match : LEA_4 (HMM E-Value=0.00053) 31 0.51
SB_58463| Best HMM Match : DUF1168 (HMM E-Value=0.44) 30 1.6
SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) 30 1.6
SB_37330| Best HMM Match : S-antigen (HMM E-Value=4.1e-09) 29 2.7
SB_36280| Best HMM Match : Dehydrin (HMM E-Value=4.4) 29 2.7
SB_29502| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_15878| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_55378| Best HMM Match : Connexin50 (HMM E-Value=1.8) 29 3.6
SB_38975| Best HMM Match : Serpin (HMM E-Value=0) 29 3.6
SB_25851| Best HMM Match : Laminin_G_2 (HMM E-Value=0) 29 3.6
SB_3353| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_35110| Best HMM Match : LRR_1 (HMM E-Value=3.9e-09) 28 4.8
SB_4548| Best HMM Match : WD40 (HMM E-Value=6.7e-35) 28 4.8
SB_52960| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_16504| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_9147| Best HMM Match : Sushi (HMM E-Value=0) 28 6.3
SB_910| Best HMM Match : Cation_efflux (HMM E-Value=0.056) 28 6.3
SB_48709| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.4
SB_40929| Best HMM Match : Attractin (HMM E-Value=5.1) 27 8.4
SB_34458| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.4
SB_10690| Best HMM Match : Pkinase (HMM E-Value=6.4e-08) 27 8.4
SB_46989| Best HMM Match : Pox_A32 (HMM E-Value=0.023) 27 8.4
SB_31903| Best HMM Match : Amino_oxidase (HMM E-Value=3.36312e-44) 27 8.4
SB_23835| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.4
SB_9925| Best HMM Match : Kinesin (HMM E-Value=0.00094) 27 8.4
>SB_13211| Best HMM Match : Extensin_2 (HMM E-Value=0.0053)
Length = 545
Score = 37.9 bits (84), Expect = 0.006
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = +1
Query: 274 GTMARHPIPHEELFQTRTREDHEKHRDRSEIRNERNKCHRHRQADECETKIPAQHKTVVR 453
G+ R IPHE+ + EDHE++ + + ++ + Q DE E K P Q K +R
Sbjct: 310 GSWKRAMIPHEDEEEEEDAEDHEENNENEDTPSDEQEKAEEIQEDEPEDK-PTQRKITLR 368
Query: 454 S 456
S
Sbjct: 369 S 369
>SB_42043| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 36.7 bits (81), Expect = 0.014
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +1
Query: 235 DRALRGRQRTDSEGTMARHPIPHEELFQTRTREDHE--KHRDRSEIRNERNKCHRHRQAD 408
DR+ R R R E R P P E + R+ H+ +HR++S R E ++ HR R+ D
Sbjct: 202 DRSYRDRDRRSRE---EREPRPERESDRDSNRQKHQRDRHREKSTHRRESSRDHRDRRKD 258
>SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18)
Length = 765
Score = 33.1 bits (72), Expect = 0.17
Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 1/139 (0%)
Frame = +1
Query: 112 PQNDSVTKTTNLRLFDRNPPKSRRGDE*QFRVFASLQLAAADRALRGRQRTDSEGTMARH 291
P D + R R+ KSR+ E + R + + +A R+ R Q++ S +R
Sbjct: 205 PSTDKRKSRSRSRSRSRSHRKSRKRSESRSRSRSPKKSRSARRS-RSPQKSRSP-QRSRS 262
Query: 292 PIPHEELFQTRTREDHEKHRDRSEIRNERNKCHRH-RQADECETKIPAQHKTVVRS*SCT 468
P + R+ H KHR S R+ R+K R R+ +++ P +++ S SC
Sbjct: 263 PRSSKRY---RSSRSHRKHRSHSRSRSPRSKRSRSPRKRRRSKSRSPRRYRD---SSSCR 316
Query: 469 IRFQQSREVGDQSQQNDRA 525
R +SR +S+ R+
Sbjct: 317 RRRSRSRSRSPKSRLRSRS 335
>SB_7865| Best HMM Match : Mucin (HMM E-Value=1.2)
Length = 2527
Score = 33.1 bits (72), Expect = 0.17
Identities = 29/123 (23%), Positives = 51/123 (41%), Gaps = 6/123 (4%)
Frame = +1
Query: 205 VFASLQLAAADRALRGRQRTDSEGTMARHPIPHEELFQTRTREDHEKH--RDRSEIRNER 378
++AS++ + R D E T HP + R R+D E + R+R++ R +
Sbjct: 1344 LYASVKALSCVLRSNPAARRDMERTRDYHPDDDGDRDNNRDRDDFEPYHTRERADNREDD 1403
Query: 379 NKCHRHRQADECETKIPAQHKTVVRS----*SCTIRFQQSREVGDQSQQNDRAGHEREDI 546
+R D+C+ A KT V + IR + D+ DR + +DI
Sbjct: 1404 RDRDDNRDRDDCDPDDIATVKTTVTMTATVTTTVIRADNREDDRDRDDNRDRDDCDPDDI 1463
Query: 547 RSL 555
++
Sbjct: 1464 ATV 1466
>SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13)
Length = 1463
Score = 31.9 bits (69), Expect = 0.39
Identities = 24/97 (24%), Positives = 40/97 (41%)
Frame = +1
Query: 247 RGRQRTDSEGTMARHPIPHEELFQTRTREDHEKHRDRSEIRNERNKCHRHRQADECETKI 426
R +R E + R + + +R R D E+ RDRS R+ R R D ++
Sbjct: 1075 RDSKRGSRESSRDRDRLRERDRESSRDRHDRERDRDRSRDRDRVRDRDRDRDRDRDRERV 1134
Query: 427 PAQHKTVVRS*SCTIRFQQSREVGDQSQQNDRAGHER 537
P + + R + R ++SQ +D +G R
Sbjct: 1135 PDRERDRDRD------RNRRRGRDNRSQSSDSSGDRR 1165
>SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2851
Score = 31.5 bits (68), Expect = 0.51
Identities = 19/82 (23%), Positives = 34/82 (41%), Gaps = 3/82 (3%)
Frame = +1
Query: 205 VFASLQLAAADRALRGRQRTDSEGTMARH---PIPHEELFQTRTREDHEKHRDRSEIRNE 375
V AS+Q + + + + D M + P EE T DH KHR ++ +E
Sbjct: 1736 VMASMQNSLMESSFEDKSAEDELKEMTKEIESMAPTEEHEDTTQHHDHHKHRGKNAKDSE 1795
Query: 376 RNKCHRHRQADECETKIPAQHK 441
+H+ D+ + P + +
Sbjct: 1796 SKGTSKHKDGDKKQQPKPQRER 1817
>SB_19195| Best HMM Match : LEA_4 (HMM E-Value=0.00053)
Length = 1152
Score = 31.5 bits (68), Expect = 0.51
Identities = 23/106 (21%), Positives = 46/106 (43%), Gaps = 3/106 (2%)
Frame = +1
Query: 247 RGRQRTDSEGTMARHPIPHEELFQTRTREDHEKHRD-RSEIRNERNKCHRHRQADECETK 423
+G Q+ S P + + + TR D R ++++ K + E +
Sbjct: 527 KGAQQRSSTLRRKIVPTANTRVSRRTTRNSDSATNDFRHSLKDDSEKTLIRVLRSDLEEE 586
Query: 424 IPAQHKTVVRS*SCTIRFQQSREVGDQSQQN--DRAGHEREDIRSL 555
PA+HK V + S +FQ+ R ++ Q+ D G + +++ +L
Sbjct: 587 EPARHKRVHKKRSSDEKFQRKRRAAEEEQKRSYDDKGADNKELENL 632
>SB_58463| Best HMM Match : DUF1168 (HMM E-Value=0.44)
Length = 603
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/111 (17%), Positives = 52/111 (46%)
Frame = +1
Query: 244 LRGRQRTDSEGTMARHPIPHEELFQTRTREDHEKHRDRSEIRNERNKCHRHRQADECETK 423
L G+ + + +AR H ++ + + H++ + N + + R +Q + + +
Sbjct: 185 LEGQNMSPFDSAVARMQPSHADMGRGNGQISHQEGSGKQGDCNTQQRQQRLQQQLQKQHQ 244
Query: 424 IPAQHKTVVRS*SCTIRFQQSREVGDQSQQNDRAGHEREDIRSLLLRRLPE 576
P+QHKT ++ +Q ++ + QQ + +++ ++ + +RL +
Sbjct: 245 RPSQHKTQTQNKQSRASKKQQQQQEMKIQQQQQQYIQQQQVQHMQQQRLQQ 295
>SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35)
Length = 2049
Score = 29.9 bits (64), Expect = 1.6
Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Frame = +1
Query: 322 RTREDHEKHRDRSEIRNERNKCHRHRQADECETKIPAQHKTVVRS*SCTIRFQQS--REV 495
R E+ +H+ + ER K HR Q D+ T++ K R + T +Q R+V
Sbjct: 865 RKVEERARHKGGNRATQEREKKHRRNQPDKRRTQMRIPRKGTPRKRNQTNPREQRRVRKV 924
Query: 496 GDQSQQNDRAGHEREDIRSLLLRRLPE 576
+ ++ +D +E S+L + E
Sbjct: 925 KETTKDDDNKENESLADESMLTQEEEE 951
>SB_37330| Best HMM Match : S-antigen (HMM E-Value=4.1e-09)
Length = 818
Score = 29.1 bits (62), Expect = 2.7
Identities = 32/146 (21%), Positives = 61/146 (41%)
Frame = +1
Query: 106 HKPQNDSVTKTTNLRLFDRNPPKSRRGDE*QFRVFASLQLAAADRALRGRQRTDSEGTMA 285
HKP + + +++ + + R+P R V SL ++A R+ D T +
Sbjct: 332 HKPSSRNTSRSRS-PVRSRSPIHPRSWSR---SVSHSLSHSSASRSPTPED-WDRSRTPS 386
Query: 286 RHPIPHEELFQTRTREDHEKHRDRSEIRNERNKCHRHRQADECETKIPAQHKTVVRS*SC 465
R P P + QT + KHR +R K H+H+ A + +T+ + S
Sbjct: 387 RSPTP-DSRSQTSNGDKSRKHR-------KRKKTHKHKHAKKSKTEEQTDDGKTDKKKSK 438
Query: 466 TIRFQQSREVGDQSQQNDRAGHERED 543
+S+ G++S+ + +E+
Sbjct: 439 KKSKDKSKNKGEKSKNKEEESKNKEE 464
>SB_36280| Best HMM Match : Dehydrin (HMM E-Value=4.4)
Length = 426
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/80 (25%), Positives = 35/80 (43%)
Frame = +1
Query: 160 RNPPKSRRGDE*QFRVFASLQLAAADRALRGRQRTDSEGTMARHPIPHEELFQTRTREDH 339
R+PP R R + + ++ DR+ R R D + +R P + + R R+
Sbjct: 73 RSPPHRRDSSR---RSHSPSRRSSDDRSTDARDRRDRRRSSSRERRPPRDRDRDRDRDRD 129
Query: 340 EKHRDRSEIRNERNKCHRHR 399
RDR ++R++ R R
Sbjct: 130 RYDRDRGRRDSDRDRYDRDR 149
>SB_29502| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/80 (25%), Positives = 35/80 (43%)
Frame = +1
Query: 160 RNPPKSRRGDE*QFRVFASLQLAAADRALRGRQRTDSEGTMARHPIPHEELFQTRTREDH 339
R+PP R R + + ++ DR+ R R D + +R P + + R R+
Sbjct: 73 RSPPHRRDSSR---RSHSPSRRSSDDRSTDARDRRDRRRSSSRERRPPRDRDRDRDRDRD 129
Query: 340 EKHRDRSEIRNERNKCHRHR 399
RDR ++R++ R R
Sbjct: 130 RYDRDRGRRDSDRDRYDRDR 149
>SB_15878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1929
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +1
Query: 58 NTPRVLPSDNRPKVPVHKPQNDSVTKTTNLRLFDRNPPK 174
N P P+++ P +P+++P NDS N D P +
Sbjct: 1331 NIPINRPANDSPNIPINRPANDSPNIPINRPAQDSKPAR 1369
Score = 27.9 bits (59), Expect = 6.3
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +1
Query: 52 TANTPRVLPSDNRPKVPVHKPQNDS 126
+ N P P+++ P +P+++P NDS
Sbjct: 1305 STNIPINRPANDSPNIPINRPANDS 1329
Score = 27.5 bits (58), Expect = 8.4
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +1
Query: 58 NTPRVLPSDNRPKVPVHKPQNDS 126
N P P+++ P +P+++P NDS
Sbjct: 1319 NIPINRPANDSPNIPINRPANDS 1341
>SB_55378| Best HMM Match : Connexin50 (HMM E-Value=1.8)
Length = 455
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +1
Query: 64 PRVLPSDNRPKVPVHKPQND-SVTKTTNLRLFDRNPPKSRRG 186
PR + NRP +PVH+ +D S + + L PP+SR G
Sbjct: 54 PRKISDTNRPNIPVHETYSDESKVRQESPPL----PPRSRHG 91
>SB_38975| Best HMM Match : Serpin (HMM E-Value=0)
Length = 380
Score = 28.7 bits (61), Expect = 3.6
Identities = 26/125 (20%), Positives = 49/125 (39%), Gaps = 3/125 (2%)
Frame = +2
Query: 179 AEETNDNFVFSPLSNWLQLIALSEGAKGRTLKELWRVTRFHMRNCFKRELGKIMR--NIE 352
A++ N +SP S + L GA+G T ++ + FH + ++ N
Sbjct: 23 AQDGQTNLFYSPASIVVALAMTYLGARGNTATQMTKT--FHFPTDVPEKFHDFLQALNAS 80
Query: 353 TDLKFETKETNVIVIDKLMNVKRKFLRNIKQLYGVKAALLDFNSPEKSA-IKANKMIEQA 529
+ N + + +F + K+ + + AL+D+ A N+ +EQ
Sbjct: 81 NSDGNQILMANRLFAQMGFEILEEFKKASKESFSAEMALVDYVKNSNGARDTVNRWVEQK 140
Query: 530 TNGKI 544
T KI
Sbjct: 141 TKDKI 145
>SB_25851| Best HMM Match : Laminin_G_2 (HMM E-Value=0)
Length = 683
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +1
Query: 28 RSAQACTQTANTPRVLPSDNRPKVPVHKPQNDSVTKTTNLRLFDRNPPKSRR 183
R + + + T R S +RPK P +P+ +S R +N KSRR
Sbjct: 499 RERNSVKEISTTRRPRKSTHRPKKPTRRPRKNSPRTRKPTRRPRKNTHKSRR 550
>SB_3353| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 320
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +1
Query: 28 RSAQACTQTANTPRVLPSDNRPKVPVHKPQNDSVTKTTNLRLFDRNPPKSRR 183
R + + + T R S +RPK P +P+ +S R +N KSRR
Sbjct: 136 RERNSVKEISTTRRPRKSTHRPKKPTRRPRKNSPRTRKPTRRPRKNTHKSRR 187
>SB_35110| Best HMM Match : LRR_1 (HMM E-Value=3.9e-09)
Length = 546
Score = 28.3 bits (60), Expect = 4.8
Identities = 26/114 (22%), Positives = 41/114 (35%), Gaps = 1/114 (0%)
Frame = +1
Query: 1 RNSARGTDRRSAQACTQTANTPRVLPSDNRPKVPVHKPQNDSVTKTTNLRLFDRNPPKSR 180
R+S T R + A +++NTPR +PS + P N+ V +
Sbjct: 240 RDSEPATPRNLSTAPAKSSNTPRRVPSRSHSVTP-KSQYNEDVREDVRSSGEPTQLAGVG 298
Query: 181 RGDE*QFRVFASLQLAAADRALRGRQRTDSEGT-MARHPIPHEELFQTRTREDH 339
D Q R + + D Q + EGT P H + R + +H
Sbjct: 299 EDDSRQHRQAEAARQTQMDEGFFMTQVDEQEGTHQTEQPKEHRKRKSRRAKHEH 352
>SB_4548| Best HMM Match : WD40 (HMM E-Value=6.7e-35)
Length = 844
Score = 28.3 bits (60), Expect = 4.8
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +1
Query: 322 RTREDHEKHRDRSEIRNERNKCHRHRQADECETKIPAQHKTVV 450
R R D ++ RDR R +R++ R R D +TK P + KT V
Sbjct: 225 RDRMDRDRDRDRDRDR-DRDRGERDRDRDR-DTKPPEKSKTPV 265
>SB_52960| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 776
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/51 (27%), Positives = 29/51 (56%)
Frame = +2
Query: 281 WRVTRFHMRNCFKRELGKIMRNIETDLKFETKETNVIVIDKLMNVKRKFLR 433
WR+TR FK E+ ++RN + L + ++ +I++D +V++ + R
Sbjct: 279 WRLTR---STAFK-EIEDLLRNFKDQLDAKGQDLKMIIVDDCCSVRQSYHR 325
>SB_16504| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 252
Score = 27.9 bits (59), Expect = 6.3
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 235 DRALRGRQRTDSEGTMARHPIPHEELFQTRTREDHEKHRDRSE-IRNERNKCHRHRQAD 408
D+ ++ R DSE R E + R RE RDR E R ER++ R R+ D
Sbjct: 108 DQNVKHSGRVDSERYEDREDRERGERDRDRRRERDRGERDRGERDRGERDRGERDRRRD 166
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/61 (24%), Positives = 30/61 (49%)
Frame = +1
Query: 1 RNSARGTDRRSAQACTQTANTPRVLPSDNRPKVPVHKPQNDSVTKTTNLRLFDRNPPKSR 180
R+++ RRSA + + P D R + P H+ + ++ + + +D +PP+ R
Sbjct: 829 RDASPRRRRRSASGSDSSPHRRSESPRDRRRRSPEHRRRREASPPRRDRKRYD-SPPRRR 887
Query: 181 R 183
R
Sbjct: 888 R 888
>SB_9147| Best HMM Match : Sushi (HMM E-Value=0)
Length = 1656
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 52 TANTPRVLPSDNRPKVPVHKPQ 117
+ +T RV+PS++ P P +KPQ
Sbjct: 1547 STDTVRVMPSEHEPNFPKNKPQ 1568
>SB_910| Best HMM Match : Cation_efflux (HMM E-Value=0.056)
Length = 416
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +1
Query: 247 RGRQRTDSEGTMARHPIPHEELFQTRTREDHEKHRDRSEIRNERNKCHRHRQADECETK 423
R R+R D + + R + D ++ RD ++ R++ HR R+ +E ETK
Sbjct: 334 RDRERRDKHKSSRDRDKDRSSRDRKREKRDGDRQRDD---KDRRDRKHRKREVEEEETK 389
>SB_48709| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 931
Score = 27.5 bits (58), Expect = 8.4
Identities = 23/105 (21%), Positives = 42/105 (40%)
Frame = +1
Query: 238 RALRGRQRTDSEGTMARHPIPHEELFQTRTREDHEKHRDRSEIRNERNKCHRHRQADECE 417
R R R+R + + + RH + R R+ E+ R E + + RH+ + E
Sbjct: 831 RRERDRERRERDSSSRRHRDKDRDKGSDRDRDKREERSSRRERSKDTREKKRHKGSSEAP 890
Query: 418 TKIPAQHKTVVRS*SCTIRFQQSREVGDQSQQNDRAGHEREDIRS 552
+ + +V R ++SRE +S+ A E + S
Sbjct: 891 STDGQEEGELVSK----KRSRRSREEKKESKSEAPAEPEEGQLSS 931
>SB_40929| Best HMM Match : Attractin (HMM E-Value=5.1)
Length = 566
Score = 27.5 bits (58), Expect = 8.4
Identities = 33/154 (21%), Positives = 60/154 (38%), Gaps = 3/154 (1%)
Frame = +1
Query: 1 RNSARGTDRRSAQACTQTANTPRVLPSDNRP-KVPVHKPQN-DSVTKTTNLRLFDRNPPK 174
R ++ T + Q + A PR + K KPQ+ D + R+ P+
Sbjct: 22 RQASHKTKTSNPQDQDKQAARPRQASRKTKTSKTKTSKPQDQDKQDQDKQAASRKRSKPQ 81
Query: 175 SRRGDE*QFRVFASLQLAAADRALRGRQRTDSEGTMARHP-IPHEELFQTRTREDHEKHR 351
+ + R + + +A R RQ + + T P P E+ Q + R+ K +
Sbjct: 82 DQDKKAARPRQASRKTKTSKPQATRPRQASSKKKTSKNKPGKPQEKDKQEQARQAARKRQ 141
Query: 352 DRSEIRNERNKCHRHRQADECETKIPAQHKTVVR 453
R+ + +NK +++ + TK Q K R
Sbjct: 142 ARTSQASRKNKPSKNKPSKNKTTKPQDQDKQDAR 175
>SB_34458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1318
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 25 RRSAQACTQTANTPRVLPSDNRPKVPVHKPQNDSVTKTTNLRL 153
+RS T +++TP PS++ P P+ K + SVT T N R+
Sbjct: 55 QRSVPVST-SSSTPVSSPSNSTPSTPIRK--SSSVTVTLNRRI 94
>SB_10690| Best HMM Match : Pkinase (HMM E-Value=6.4e-08)
Length = 865
Score = 27.5 bits (58), Expect = 8.4
Identities = 20/78 (25%), Positives = 36/78 (46%)
Frame = +1
Query: 304 EELFQTRTREDHEKHRDRSEIRNERNKCHRHRQADECETKIPAQHKTVVRS*SCTIRFQQ 483
EEL + K +++S R RN HR + + + + K+ +RS S R ++
Sbjct: 251 EELSKDGKERSKSKDQEKSTPRERRNSSSHHRSSSREKDRKSSMDKS-IRS-SSRDRDKK 308
Query: 484 SREVGDQSQQNDRAGHER 537
SR +S++ D E+
Sbjct: 309 SRRSWSKSKERDSKLREK 326
>SB_46989| Best HMM Match : Pox_A32 (HMM E-Value=0.023)
Length = 719
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = -3
Query: 310 VPHVESGDAP*FLQSPSFGALGERDQLQPVGERRKHEIVIRLLGDSLEDSDR 155
V H + ++ +L PS+G LG+R L G R + L +E DR
Sbjct: 254 VTHTSAKESGRWLSEPSYGYLGKRPFLYRGGRRNVFKTYEELYLSKVEREDR 305
>SB_31903| Best HMM Match : Amino_oxidase (HMM E-Value=3.36312e-44)
Length = 1021
Score = 27.5 bits (58), Expect = 8.4
Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = +1
Query: 316 QTRTREDHEKHRDRSEIRNERN-KCHRHRQADECETKIPAQHKTVVRS*SCTIRFQQSRE 492
QTR R + + ++ + +CH +RQ C +I A + V+ E
Sbjct: 171 QTRARNLQQHDMAKGQLDPGKTLRCHSNRQLT-CNLRIKASNMQHVKK-------NMGHE 222
Query: 493 VGDQSQQNDRAGHEREDIR 549
GD + GHE+ D++
Sbjct: 223 KGDMQHEKKNMGHEKGDMQ 241
>SB_23835| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 596
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/63 (22%), Positives = 31/63 (49%)
Frame = +1
Query: 235 DRALRGRQRTDSEGTMARHPIPHEELFQTRTREDHEKHRDRSEIRNERNKCHRHRQADEC 414
DR LR ++ D+ + H + + + RE+ E+ R +S +C ++R+ ++C
Sbjct: 513 DRTLRHQEMLDTRRKLENSWAEH--VTRKKDREEEERMRAQSPGMLIHEQCEKYRRCNQC 570
Query: 415 ETK 423
+
Sbjct: 571 RRR 573
>SB_9925| Best HMM Match : Kinesin (HMM E-Value=0.00094)
Length = 1671
Score = 27.5 bits (58), Expect = 8.4
Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Frame = +1
Query: 232 ADRALRGRQ---RTDSEGTMARHPIPHEELFQTRTREDHEKHRDRSEIRNERNKCHRHRQ 402
+DR LR Q + D G + R + HE + + + RDR + R++ +R
Sbjct: 1262 SDRKLRLHQSEPQMDRYGNLKRPTLSHERISPSTPYAPQVEFRDRQKQRSQAKLIYRLSG 1321
Query: 403 ADECETKIPAQHKT 444
AD E A T
Sbjct: 1322 ADFLEAMSSAMETT 1335
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,216,491
Number of Sequences: 59808
Number of extensions: 358670
Number of successful extensions: 1383
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1372
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1385833362
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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