Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0691
(453 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC2D10.18 |abc1|coq8|ABC1 kinase family protein|Schizosaccharo... 120 8e-29
SPAC10F6.14c |||ABC1 kinase family protein|Schizosaccharomyces p... 36 0.002
SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pomb... 29 0.33
SPAC2G11.14 |taf111|taf1, taf1, taf130|transcription factor TFII... 28 0.77
SPBC18H10.02 |lcf1||long-chain-fatty-acid-CoA ligase Lcf1 |Schiz... 27 1.8
SPAC23C4.18c |rad4|cut5, dre3|BRCT domain protein Rad4|Schizosac... 26 3.1
SPBC13G1.03c |pex14||peroxisomal membrane anchor protein|Schizos... 25 4.1
SPAC144.06 |apl5||AP-3 adaptor complex subunit Apl5 |Schizosacch... 25 4.1
SPCC576.05 |||nucear export factor|Schizosaccharomyces pombe|chr... 25 5.4
SPCC613.07 |||zf-HIT|Schizosaccharomyces pombe|chr 3|||Manual 25 5.4
SPBC25B2.09c |||arginine-tRNA ligase|Schizosaccharomyces pombe|c... 25 7.2
SPAC959.09c |apc5|SPAP32A8.01c|anaphase-promoting complex subuni... 24 9.5
SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|c... 24 9.5
>SPBC2D10.18 |abc1|coq8|ABC1 kinase family
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 610
Score = 120 bits (290), Expect = 8e-29
Identities = 62/141 (43%), Positives = 84/141 (59%)
Frame = +1
Query: 31 INSDIDNLVGVMKVWNMFPKGMFIDNVVEVAKKELAWEVDYIREAECTRKFKTLLAQYPE 210
I+SD++NL ++K + PKG+F++N + A+KEL WE DY REA +F +LL +
Sbjct: 335 IDSDLNNLAYLLKASRILPKGLFLENSLAAARKELKWECDYEREAAFAERFGSLLKNDSD 394
Query: 211 YFVPDVIDELCAQEVITTELIDGVPLDKLFDASYETRVDIASKIMKLCLREMFVLRCMQT 390
+ VP V E VIT E + G+ L K S TR I + K CLRE+ MQT
Sbjct: 395 FKVPMVFREASGPSVITLEYLHGIALGKQ-KYSQATRNHIGYLLTKQCLREISEYHFMQT 453
Query: 391 DPNWANFFYNTNTKQVILLDF 453
DPNW+NF YN TK++ LLDF
Sbjct: 454 DPNWSNFLYNGKTKKIELLDF 474
>SPAC10F6.14c |||ABC1 kinase family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 535
Score = 36.3 bits (80), Expect = 0.002
Identities = 27/122 (22%), Positives = 54/122 (44%), Gaps = 9/122 (7%)
Frame = +1
Query: 112 VEVAKKELAWEVDYIREAECTRKFKTLLAQYP----EYFVPDVIDELCAQEVITTELIDG 279
V+ + L EVD+ EA + + + + + ++P V E+ + V+ TE DG
Sbjct: 244 VDYVSERLRSEVDFTTEANNSEHAREGVEETDYLRDKIYIPKVYKEISGKRVMVTEWADG 303
Query: 280 VPL--DKLFDASYETRVDIASKIMKLCLREMFVLRCMQTDPNWANFFYNTNTK---QVIL 444
+PL + ++ +I + + + +MF + + DP+ N N Q ++
Sbjct: 304 IPLYDQTALSEAGMSKKEILTNLFRFLAFQMFHSKQVHCDPHPGNILVRKNQAGLCQTVI 363
Query: 445 LD 450
LD
Sbjct: 364 LD 365
>SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 29.1 bits (62), Expect = 0.33
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -2
Query: 305 ASNSLSRGTPSISSVVITSCAHNSSMTSGTKYSGYCANRVLNFLV 171
+SNS G + ++ +S A NSS +S T YSG +N V V
Sbjct: 205 SSNSTISGFSTSTTSASSSAAGNSSSSSYTSYSGAVSNGVAQLSV 249
>SPAC2G11.14 |taf111|taf1, taf1, taf130|transcription factor TFIID
complex subunit Taf111|Schizosaccharomyces pombe|chr
1|||Manual
Length = 979
Score = 27.9 bits (59), Expect = 0.77
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +1
Query: 61 VMKVWNMFPKGMFIDNVVEVAKKELAWEV--DYIREAECTRKFKT 189
+ ++WN +G+ I+N+ E+AKK + DY+ E T + +T
Sbjct: 796 INRIWNAQKRGLSINNLEELAKKYGINSIHDDYVESNEETTREET 840
>SPBC18H10.02 |lcf1||long-chain-fatty-acid-CoA ligase Lcf1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 676
Score = 26.6 bits (56), Expect = 1.8
Identities = 16/54 (29%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
Frame = +1
Query: 1 CRNSARGAKGINSDIDNLVGVMKVWNMFPKGMFID-NVVEVAKKELAWEVDYIR 159
CRN I +VGV VW M KG+ N K+ + W Y +
Sbjct: 322 CRNCKGDINTFRPTI--MVGVPAVWEMVRKGIMSKLNAASAVKRSVFWTAYYTK 373
>SPAC23C4.18c |rad4|cut5, dre3|BRCT domain protein
Rad4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 648
Score = 25.8 bits (54), Expect = 3.1
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 52 LVGVMKVWNMFPKGMFIDNV 111
+VGV +WN+ G FID V
Sbjct: 463 VVGVAWLWNIIQSGKFIDQV 482
>SPBC13G1.03c |pex14||peroxisomal membrane anchor
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 286
Score = 25.4 bits (53), Expect = 4.1
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 358 REMFVLRCMQTDPNWANFFYNTNTKQVILLD 450
RE+ LRC+QTD + F T+ + +L+
Sbjct: 205 REISSLRCLQTDSKKDDTFATTSNSSIPVLE 235
>SPAC144.06 |apl5||AP-3 adaptor complex subunit Apl5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 834
Score = 25.4 bits (53), Expect = 4.1
Identities = 9/39 (23%), Positives = 22/39 (56%)
Frame = +1
Query: 286 LDKLFDASYETRVDIASKIMKLCLREMFVLRCMQTDPNW 402
LD L S++ ++A +++ + ++F C++ +P W
Sbjct: 496 LDALTRPSFKKCSNLAHRLLLQAITKIFCQWCLEEEPTW 534
>SPCC576.05 |||nucear export factor|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1024
Score = 25.0 bits (52), Expect = 5.4
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = -1
Query: 333 RDIDACLIGCVE*LIERYAVYQFCCYHFLCAQFVYDVRNEV 211
RD+DA + C E R A Y C H LC + + + EV
Sbjct: 210 RDLDA--VACHE----RIARYHILCIHQLCEKKQFSAQQEV 244
>SPCC613.07 |||zf-HIT|Schizosaccharomyces pombe|chr 3|||Manual
Length = 345
Score = 25.0 bits (52), Expect = 5.4
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +1
Query: 223 DVIDELCAQEVITTELIDGVPLDKLFDASYETRVDIASKIMK 348
D+ DE +IT + PL+K+F E ++ S++ K
Sbjct: 148 DLTDEASENTIITHSHPESEPLEKIFRKLVEENSEMNSQVSK 189
>SPBC25B2.09c |||arginine-tRNA ligase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 618
Score = 24.6 bits (51), Expect = 7.2
Identities = 8/16 (50%), Positives = 15/16 (93%)
Frame = +1
Query: 88 KGMFIDNVVEVAKKEL 135
K +F+D+++EVAK+E+
Sbjct: 426 KAVFLDDIMEVAKEEM 441
>SPAC959.09c |apc5|SPAP32A8.01c|anaphase-promoting complex subunit
Apc5 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 737
Score = 24.2 bits (50), Expect = 9.5
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -2
Query: 83 NMFHTFITPTRLSMSLLI 30
N + TF+TP +L++ LLI
Sbjct: 18 NFYTTFLTPHKLTLCLLI 35
>SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|chr
3|||Manual
Length = 625
Score = 24.2 bits (50), Expect = 9.5
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -2
Query: 290 SRGTPSISSVVITSCAHNSSMTSGTKYS 207
S + S SSV +TS A++SS +S + S
Sbjct: 573 SGSSTSTSSVAVTSTAYSSSSSSSSSSS 600
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,778,264
Number of Sequences: 5004
Number of extensions: 34812
Number of successful extensions: 181
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 180
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 168258430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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