Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0691
(453 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0056 + 12089404-12090300,12090429-12090581,12090999-120911... 88 6e-22
05_03_0511 + 14907475-14907933,14907948-14908178,14908520-149088... 46 1e-05
01_06_1711 - 39351056-39351063,39351161-39351350,39351509-393516... 46 1e-05
02_05_1221 - 35023734-35023868,35024002-35024217,35024349-350246... 39 0.002
02_04_0333 + 22096960-22097445,22098508-22098643,22099159-220993... 33 0.11
12_01_0588 + 4795620-4796093,4796124-4797476,4797575-4797827,479... 29 2.3
11_01_0332 + 2483743-2484131,2486062-2486182,2486307-2486426,248... 28 4.0
12_01_0356 - 2707820-2708395,2708475-2708705,2709071-2709190,270... 27 5.3
11_01_0647 - 5247217-5247467,5247593-5247842,5247943-5249793 27 7.1
11_01_0643 - 5174154-5174254,5174296-5174346,5174611-5174739,517... 27 7.1
06_01_0841 - 6379999-6380040,6380641-6380760,6380863-6380964,638... 27 7.1
02_05_0769 + 31616644-31616875,31616980-31617203,31617308-316174... 27 7.1
02_05_0455 - 29154374-29155136,29155257-29156455,29156904-291570... 27 7.1
12_01_0015 - 111666-111747,112043-112368,112500-112635,112772-11... 27 9.3
11_01_0015 - 115965-116076,116432-116757,116889-117024,117161-11... 27 9.3
08_02_1472 + 27357001-27357277,27357362-27357369 27 9.3
06_03_0204 + 17869426-17869554,17870105-17870338 27 9.3
02_04_0622 - 24508508-24508666,24509533-24509634,24510108-245101... 27 9.3
01_01_0131 - 1186129-1186242,1186640-1186720,1186843-1186993,118... 27 9.3
>01_03_0056 +
12089404-12090300,12090429-12090581,12090999-12091157,
12091575-12091734,12092185-12092201,12092682-12092798,
12092914-12093303
Length = 630
Score = 87.8 bits (208), Expect(2) = 6e-22
Identities = 40/91 (43%), Positives = 62/91 (68%)
Frame = +1
Query: 22 AKGINSDIDNLVGVMKVWNMFPKGMFIDNVVEVAKKELAWEVDYIREAECTRKFKTLLAQ 201
A I SDI+N+ ++ N+ PKG+F+D ++VAK ELA E DY+ EA +++K LL+
Sbjct: 372 ADSIESDIENVRLLLSYTNLIPKGLFLDRAMKVAKLELARECDYVLEATNQKRYKELLSD 431
Query: 202 YPEYFVPDVIDELCAQEVITTELIDGVPLDK 294
Y+VP VIDEL +++V+ +E + G P+DK
Sbjct: 432 SEGYYVPKVIDELSSKKVLMSEFVPGFPIDK 462
Score = 33.1 bits (72), Expect(2) = 6e-22
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +1
Query: 385 QTDPNWANFFYNTNTKQVILLDF 453
+TDPNW+NF ++ T++ L+DF
Sbjct: 462 KTDPNWSNFLFDEPTRKFNLIDF 484
>05_03_0511 +
14907475-14907933,14907948-14908178,14908520-14908855,
14909571-14910126,14910217-14910424,14910519-14910885,
14910988-14911110
Length = 759
Score = 46.0 bits (104), Expect = 1e-05
Identities = 30/108 (27%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Frame = +1
Query: 142 EVDYIREAECTRKFKTLLAQYPEYFVPDVIDELCAQEVITTELIDGVPLDKLFDASYETR 321
E++Y++E + R+FK L A + VPD+ + + +V+T E I+GV L++ A+ E +
Sbjct: 337 ELNYVQEGQNARRFKKLYADKQDVLVPDIFWDYTSAKVLTMEWIEGVKLNQ--QAAIEKQ 394
Query: 322 ----VDIASKIMKLCLREMFVLRCMQTDPNWANFFYNTNTKQVILLDF 453
+D+ + ++ LR++ DP+ N K + LDF
Sbjct: 395 GLKVLDLVNIGIQCSLRQLLEYGYFHADPHPGNILATPEGK-LAFLDF 441
>01_06_1711 -
39351056-39351063,39351161-39351350,39351509-39351662,
39352288-39352406,39352449-39352593,39353050-39353160,
39353966-39354093,39354646-39354774,39354868-39354915,
39355084-39355278,39355406-39355408,39355540-39355668,
39355755-39355913
Length = 505
Score = 46.0 bits (104), Expect = 1e-05
Identities = 23/85 (27%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Frame = +1
Query: 124 KKELAWEVDYIREAECTRKFKTLL----AQYPEYFVPDVIDELCAQEVITTELIDGVPLD 291
+K++ +E D++REA+ + + L + P VP VI E+ ++EV+ E I+G P+
Sbjct: 219 EKQICYEFDFVREAKAMERIREFLRVTNKKKPPVIVPRVIPEMVSREVLVMEFIEGTPIM 278
Query: 292 KLFDASYETRVDIASKIMKLCLREM 366
L + + +D KI + +++
Sbjct: 279 NLGNEMAKRGIDPGGKIATMAKQKI 303
>02_05_1221 -
35023734-35023868,35024002-35024217,35024349-35024675,
35024845-35025218,35025560-35025647,35025767-35025910,
35026053-35026178,35026264-35026412,35026539-35026644,
35026757-35026900,35027018-35027194,35027304-35027453,
35027570-35027788
Length = 784
Score = 38.7 bits (86), Expect = 0.002
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Frame = +1
Query: 142 EVDYIREAECTRKFKTLLAQ-YPEYFVPDVIDELCAQEVITTELIDGVPLDKLFDASYET 318
E+DY+ E E +F ++ + P+ VP + +++V+TT+ IDG L + S E
Sbjct: 334 ELDYVNEGENGNRFAEMMKKDLPQVVVPKTYQKYTSRKVLTTQWIDGEKLSQ----STED 389
Query: 319 RVDIASKIMKLC-LREMFVLRCMQTDPNWANFFYNTNTKQVILLDF 453
V + +C L+++ DP+ N T ++ +LDF
Sbjct: 390 DVGSLVSVGVICYLKQLLDTGFFHADPHPGNMI-RTPDGKLAILDF 434
>02_04_0333 +
22096960-22097445,22098508-22098643,22099159-22099325,
22099447-22099567,22099660-22099760,22099908-22100006,
22100512-22100622,22100709-22100788,22100880-22100949,
22101880-22101965,22102097-22102166,22102250-22102338,
22102448-22102572,22102686-22102766,22102848-22102908,
22103002-22103060,22103134-22103273,22103391-22103480,
22103917-22103976,22104072-22104188
Length = 782
Score = 33.1 bits (72), Expect = 0.11
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 142 EVDYIREAECTRKFKTLLAQYPEYFVPDVIDELCAQEVITTELIDGVPLDKL 297
E+DY +EA KF VP+++ E +V+T E + G+ ++++
Sbjct: 371 EIDYTKEAFNAEKFSENFKNMDYVKVPEILWEYTTPQVLTMEYVPGIKINRI 422
>12_01_0588 +
4795620-4796093,4796124-4797476,4797575-4797827,
4797989-4798108,4798542-4798564,4798734-4798841
Length = 776
Score = 28.7 bits (61), Expect = 2.3
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = +1
Query: 184 KTLLAQYPEYFVPDVIDELCAQEVITT 264
+T+ AQYP + + ++D+L E++TT
Sbjct: 218 QTMTAQYPSHLLSPIMDKLRGSELLTT 244
>11_01_0332 +
2483743-2484131,2486062-2486182,2486307-2486426,
2486897-2487127,2487205-2487783
Length = 479
Score = 27.9 bits (59), Expect = 4.0
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +1
Query: 40 DIDNLVGVMKVW-NMFPKGMFIDNVVEVAKKELAWEVDYIREAECTRKFKTLLAQYPEYF 216
DI L G++K W P G+ +D++ + E D R A+C + L ++
Sbjct: 201 DIHCLSGLIKAWFRELPSGV-LDSIPPEQVMQCQSEEDCARVAKCLPPAEAALLEWAVNL 259
Query: 217 VPDVIDE 237
+ DV+ E
Sbjct: 260 MADVVQE 266
>12_01_0356 -
2707820-2708395,2708475-2708705,2709071-2709190,
2709281-2709401,2711588-2712027
Length = 495
Score = 27.5 bits (58), Expect = 5.3
Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +1
Query: 40 DIDNLVGVMKVW-NMFPKGMFIDNVVEVAKKELAWEVDYIREAECTRKFKTLLAQYPEYF 216
D+ L G++K W P G+ +D++ + E D R A+C + L +
Sbjct: 218 DVHCLAGLIKAWFRELPSGV-LDSIPPEQVMQCQSEEDCARVAKCLPPTEAALLDWAVNL 276
Query: 217 VPDVIDE 237
+ DV+ E
Sbjct: 277 MADVVQE 283
>11_01_0647 - 5247217-5247467,5247593-5247842,5247943-5249793
Length = 783
Score = 27.1 bits (57), Expect = 7.1
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = +1
Query: 184 KTLLAQYPEYFVPDVIDELCAQEVITTELIDGVPLDKLFDA 306
+T+ AQYP + + ++ +L +++TT + + D L +A
Sbjct: 229 RTMTAQYPSHLLSPIVHKLQGSDLLTTHDVQSIK-DLLLNA 268
>11_01_0643 -
5174154-5174254,5174296-5174346,5174611-5174739,
5174869-5175118,5175220-5177157
Length = 822
Score = 27.1 bits (57), Expect = 7.1
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = +1
Query: 184 KTLLAQYPEYFVPDVIDELCAQEVITTELIDGVPLDKLFDA 306
+T+ AQYP + + ++ +L +++TT + + D L +A
Sbjct: 232 RTMTAQYPSHLLSPIVHKLQGSDLLTTHDVQSIK-DLLLNA 271
>06_01_0841 -
6379999-6380040,6380641-6380760,6380863-6380964,
6381146-6381302,6381480-6381511
Length = 150
Score = 27.1 bits (57), Expect = 7.1
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 229 IDELCAQEVITTELIDGVPLDKLF 300
+D+L +QEVI+ EL G+P+ +F
Sbjct: 90 LDKLTSQEVISLELSTGIPMLYIF 113
>02_05_0769 +
31616644-31616875,31616980-31617203,31617308-31617426,
31617528-31617684,31617928-31618029,31618111-31618230,
31618761-31618855,31619900-31619984,31620090-31620180,
31620534-31620618,31620702-31620806,31621019-31621894,
31622016-31622124,31622266-31622414,31622518-31622737
Length = 922
Score = 27.1 bits (57), Expect = 7.1
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 229 IDELCAQEVITTELIDGVPLDKLF 300
+D+L +QEVI+ EL G+P+ +F
Sbjct: 271 LDKLTSQEVISLELSTGIPMLYIF 294
>02_05_0455 -
29154374-29155136,29155257-29156455,29156904-29157011,
29157129-29157314,29157761-29157859,29159613-29159773,
29160856-29160913
Length = 857
Score = 27.1 bits (57), Expect = 7.1
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 145 VDYIREAE-CTRKFKTLLAQYPEYFVPDVIDELCAQEVITTELIDGVP 285
V+ I EA+ C+ K LL D ++ C+QEV+ T++++G P
Sbjct: 781 VNGIDEAKGCSMKLLHLLRDLRR---TDQLNNSCSQEVVVTDVVEGPP 825
>12_01_0015 -
111666-111747,112043-112368,112500-112635,112772-112955,
113067-113135,113703-113829,115810-116051,116125-116279,
116751-116822,116908-116976,117058-117129,117217-117349,
117439-117944,118033-118567,118753-118819
Length = 924
Score = 26.6 bits (56), Expect = 9.3
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
Frame = +1
Query: 136 AWEVDYIREAEC-----TRKFKTLLAQYPEYFVPDVIDELCAQ 249
AW V Y E E TRKFK ++ PE+ P V E AQ
Sbjct: 275 AWGVSYFAEIEDLTPNQTRKFKLVIPGKPEFSKPTVDVEENAQ 317
>11_01_0015 -
115965-116076,116432-116757,116889-117024,117161-117344,
117455-117523,118091-118217,120028-120269,120343-120497,
120969-121040,121126-121194,121276-121347,121435-121567,
121661-122166,122255-122789,122943-123018
Length = 937
Score = 26.6 bits (56), Expect = 9.3
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
Frame = +1
Query: 136 AWEVDYIREAEC-----TRKFKTLLAQYPEYFVPDVIDELCAQ 249
AW V Y E E TRKFK ++ PE+ P V E AQ
Sbjct: 278 AWGVSYFAEIEDLAPNQTRKFKLVIPGKPEFSKPTVDVEENAQ 320
>08_02_1472 + 27357001-27357277,27357362-27357369
Length = 94
Score = 26.6 bits (56), Expect = 9.3
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -3
Query: 85 ETCSIPS*LLQGCQCHC*SLSRLVPNSC 2
E CS S + QGC C S+ +P+ C
Sbjct: 58 ECCSALSSISQGCACSAISIMNSLPSRC 85
>06_03_0204 + 17869426-17869554,17870105-17870338
Length = 120
Score = 26.6 bits (56), Expect = 9.3
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = -3
Query: 163 LHVYNRLPRLVLFSPLPQR 107
L V+N+L L++FSPLP++
Sbjct: 37 LSVFNQLAHLLVFSPLPRQ 55
>02_04_0622 -
24508508-24508666,24509533-24509634,24510108-24510176,
24510294-24510362,24510428-24510502,24510584-24510688,
24511309-24511407,24511521-24513230,24513489-24513788,
24514748-24514846,24514962-24515079,24515166-24515251,
24515334-24515402,24515746-24515843,24516373-24516534,
24516779-24516787,24516970-24516991,24517620-24517712,
24517872-24517940,24518720-24518782,24518882-24519037,
24520895-24521230
Length = 1355
Score = 26.6 bits (56), Expect = 9.3
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = -2
Query: 356 RHSFMILDAISTRVS*DASNSLSRGTPSIS-SVVITSCAHNSSMTSGTKYSGYCANRVL 183
R FM D R+ D L + PS S +H SS SGT +GY + ++
Sbjct: 448 RRLFMSFDPAVQRIINDEDGGLQKRYPSPSLREKGVQLSHASSHASGTHLAGYSTSAIV 506
>01_01_0131 -
1186129-1186242,1186640-1186720,1186843-1186993,
1187100-1187167,1187323-1187438,1188108-1188366
Length = 262
Score = 26.6 bits (56), Expect = 9.3
Identities = 12/47 (25%), Positives = 26/47 (55%)
Frame = +1
Query: 235 ELCAQEVITTELIDGVPLDKLFDASYETRVDIASKIMKLCLREMFVL 375
E+ Q++ +++I VP ++ F YE + I ++ LC R + ++
Sbjct: 152 EIARQDLHDSQIITMVPSERDFMDGYEDYLPIRTRSSTLCCRTVAII 198
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,017,180
Number of Sequences: 37544
Number of extensions: 204523
Number of successful extensions: 484
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 484
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 883560296
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -