Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0691
(453 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g01660.1 68417.m00216 ABC1 family protein contains Pfam domai... 147 3e-36
At1g79600.1 68414.m09281 ABC1 family protein contains Pfam domai... 49 2e-06
At1g71810.1 68414.m08299 ABC1 family protein contains Pfam domai... 38 0.003
At3g24190.1 68416.m03036 ABC1 family protein contains Pfam domai... 37 0.007
At4g31390.1 68417.m04452 ABC1 family protein contains Pfam domai... 34 0.039
At4g24810.1 68417.m03554 ABC1 family protein contains Pfam domai... 34 0.052
At5g23190.1 68418.m02712 cytochrome P450 family protein contains... 29 1.1
At3g60450.1 68416.m06761 expressed protein 28 3.4
At5g49390.1 68418.m06112 hypothetical protein 27 4.5
At2g02980.1 68415.m00250 pentatricopeptide (PPR) repeat-containi... 27 4.5
At1g22170.1 68414.m02771 phosphoglycerate/bisphosphoglycerate mu... 27 4.5
At5g38565.1 68418.m04663 F-box family protein contains F-box dom... 27 5.9
At3g32910.1 68416.m04167 hypothetical protein similar to At2g152... 27 5.9
At1g78050.1 68414.m09095 phosphoglycerate/bisphosphoglycerate mu... 27 5.9
>At4g01660.1 68417.m00216 ABC1 family protein contains Pfam domain,
PF03109: ABC1 family
Length = 623
Score = 147 bits (357), Expect = 3e-36
Identities = 66/144 (45%), Positives = 100/144 (69%)
Frame = +1
Query: 22 AKGINSDIDNLVGVMKVWNMFPKGMFIDNVVEVAKKELAWEVDYIREAECTRKFKTLLAQ 201
A I SDI+N+ ++ N+ PKG+F+D ++VAK+ELA E DY EA ++F+ LL+
Sbjct: 330 ANSIESDIENVRRLLNYTNLIPKGLFLDRAIKVAKEELAQECDYEIEAVSQKRFRDLLSD 389
Query: 202 YPEYFVPDVIDELCAQEVITTELIDGVPLDKLFDASYETRVDIASKIMKLCLREMFVLRC 381
P ++VP V+DE +++++TTELI G+P+DK+ +TR + K+++L L+E+FV R
Sbjct: 390 TPGFYVPLVVDETSSKKILTTELISGIPIDKVALLDQKTRDYVGRKMLELTLKELFVFRF 449
Query: 382 MQTDPNWANFFYNTNTKQVILLDF 453
MQTDPNW NF YN TK + L+DF
Sbjct: 450 MQTDPNWGNFLYNEATKTINLIDF 473
>At1g79600.1 68414.m09281 ABC1 family protein contains Pfam domain,
PF03109: ABC1 family
Length = 711
Score = 48.8 bits (111), Expect = 2e-06
Identities = 30/106 (28%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Frame = +1
Query: 142 EVDYIREAECTRKFKTLLAQYPEYFVPDVIDELCAQEVITTELIDGVPL-DKLFDASYET 318
E++Y++EA+ R+FK L A + VPD+ + +++V+T E ++G L ++L S
Sbjct: 294 ELNYVQEAQNARRFKKLYADKADVLVPDIFWDYTSRKVLTMEWVEGTKLNEQLAIESQGL 353
Query: 319 RV-DIASKIMKLCLREMFVLRCMQTDPNWANFFYNTNTKQVILLDF 453
+V D+ + ++ LR++ DP+ N + K + LDF
Sbjct: 354 KVLDLVNTGIQCSLRQLLEYGFFHADPHPGNLLATPDGK-LAFLDF 398
>At1g71810.1 68414.m08299 ABC1 family protein contains Pfam domain,
PF03109: ABC1 family
Length = 692
Score = 37.9 bits (84), Expect = 0.003
Identities = 33/118 (27%), Positives = 53/118 (44%)
Frame = +1
Query: 100 IDNVVEVAKKELAWEVDYIREAECTRKFKTLLAQYPEYFVPDVIDELCAQEVITTELIDG 279
++ VV+ L E+DY+ EA+ KF+ L + VP + E +V+ E ++G
Sbjct: 252 LEAVVDEWATSLFKEMDYLNEAQNGIKFRKLYGGIKDVLVPKMYTEYSTSKVLVMEWVEG 311
Query: 280 VPLDKLFDASYETRVDIASKIMKLCLREMFVLRCMQTDPNWANFFYNTNTKQVILLDF 453
L+++ D Y V + +L L F DP+ NF T Q+ LDF
Sbjct: 312 QKLNEVNDL-YLVEVGVYCSFNQL-LEYGF----YHADPHPGNFL-RTYDGQLAYLDF 362
>At3g24190.1 68416.m03036 ABC1 family protein contains Pfam domain,
PF03109: ABC1 family
Length = 793
Score = 36.7 bits (81), Expect = 0.007
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Frame = +1
Query: 142 EVDYIREAECTRKFKTLLAQ-YPEYFVPDVIDELCAQEVITTELIDGVPLDKLFDASYET 318
E+DY+ E E F ++ + P+ VP + +++V+TT IDG L + S E+
Sbjct: 338 ELDYVNEGENGTYFAEMMKKDLPQVVVPKTYQKYTSRKVLTTSWIDGEKLSQ----SIES 393
Query: 319 RVDIASKIMKLC-LREMFVLRCMQTDPNWANFFYNTNTKQVILLDF 453
V + +C L+++ DP+ N T ++ +LDF
Sbjct: 394 DVGELVNVGVICYLKQLLDTGFFHADPHPGNMI-RTPDGKLAILDF 438
>At4g31390.1 68417.m04452 ABC1 family protein contains Pfam domain,
PF03109: ABC1 family
Length = 682
Score = 34.3 bits (75), Expect = 0.039
Identities = 26/105 (24%), Positives = 42/105 (40%), Gaps = 3/105 (2%)
Frame = +1
Query: 109 VVEVAKKELAWEVDYIREAECTRKFKTLLAQYPEYFVPDVIDELCAQEVITTELIDGVPL 288
+V+ ++L E+DY EA F P +P V LC V+ E IDG+
Sbjct: 304 IVDEFGEKLLEELDYTLEARNIEDFLENFKDDPTVKIPGVYKNLCGPRVLVMEWIDGIRC 363
Query: 289 DKLFDASYETRVDIASKI---MKLCLREMFVLRCMQTDPNWANFF 414
A + +D+ + + LR++ DP+ N F
Sbjct: 364 TDP-QAIKDAGIDLNGFLTVGVSAALRQLLEFGLFHGDPHPGNIF 407
>At4g24810.1 68417.m03554 ABC1 family protein contains Pfam domain,
PF03109: ABC1 family
Length = 438
Score = 33.9 bits (74), Expect = 0.052
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Frame = +1
Query: 124 KKELAWEVDYIREAECTRKFKTLLA---QYPEYFVPDVIDELCAQEVITTELIDGVPLDK 294
+K++ +E D+ REA K + L + VP V L ++V+ E ++G+P+
Sbjct: 160 EKQIGYEFDFKREANAMEKIRRFLYDNNRKSPVLVPRVFPNLVTRKVLVMEFMNGIPILS 219
Query: 295 LFD 303
L D
Sbjct: 220 LGD 222
>At5g23190.1 68418.m02712 cytochrome P450 family protein contains
Pfam profile: PF00067 cytochrome P450
Length = 559
Score = 29.5 bits (63), Expect = 1.1
Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Frame = +1
Query: 97 FIDNVVEVAKKELAWEVDYIREAECTRKFKTLLAQYPEYFVPDVIDELCAQEVITTELID 276
F D V+ KKEL+ E + + ++ F L + E F + ++C ++
Sbjct: 282 FADEVIRTRKKELSLEGETTKRSDLLTVFMGLRDEKGESFSDKFLRDICVNFILAGRDTS 341
Query: 277 GVPLDKLFDASYETRVDIASKIM-KLC 354
V L F E ++ KIM ++C
Sbjct: 342 SVALSWFF-WLLEKNPEVEEKIMVEMC 367
>At3g60450.1 68416.m06761 expressed protein
Length = 274
Score = 27.9 bits (59), Expect = 3.4
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Frame = +1
Query: 61 VMKVWNMFPKGMFIDNVVEVAKKEL-AWE--VDYIREAECTRKFKTLLAQYPE 210
V + MFP+GM +D+ V++ KEL WE V+ R+ + K L +YPE
Sbjct: 143 VSDIETMFPEGM-VDHNVDMVYKELPKWEESVEGCRD-RYVKVVKALADKYPE 193
>At5g49390.1 68418.m06112 hypothetical protein
Length = 422
Score = 27.5 bits (58), Expect = 4.5
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +1
Query: 379 CMQTDPNWANFFYNTNTKQVILL 447
C+Q DP+ NF +N+ ++V+LL
Sbjct: 95 CVQLDPSRTNFLHNSVIEKVLLL 117
>At2g02980.1 68415.m00250 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 603
Score = 27.5 bits (58), Expect = 4.5
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = -3
Query: 166 PLHVYNRLPRLVLFSPLPQRYL*TCL*ETCSIPS*LLQGCQCHC*SL 26
PL V++ ++ LP Y L + C++ L +G Q HC S+
Sbjct: 110 PLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSM 156
>At1g22170.1 68414.m02771 phosphoglycerate/bisphosphoglycerate
mutase family protein similar to SP|P31217
Phosphoglycerate mutase 1 (EC 5.4.2.1) {Escherichia coli
O157:H7}; contains Pfam profile PF00300:
phosphoglycerate mutase family
Length = 334
Score = 27.5 bits (58), Expect = 4.5
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +1
Query: 229 IDELCAQEVITTELIDGVPLDKLF 300
+D+L QEVI+ EL G+PL +F
Sbjct: 269 LDKLTCQEVISLELSTGIPLLYIF 292
>At5g38565.1 68418.m04663 F-box family protein contains F-box domain
Pfam:PF00646
Length = 415
Score = 27.1 bits (57), Expect = 5.9
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 145 VDYIREAECTRKFKTLLAQYPEYFVPDVID-ELCAQEVITTELIDGVPLDKL 297
V YI + C K T+LA PE+ VP++ + L + T +L++ L L
Sbjct: 296 VVYILKNACHLKTATILADEPEHLVPNLKELTLSPRASSTCQLMESTDLCSL 347
>At3g32910.1 68416.m04167 hypothetical protein similar to At2g15200,
At2g04970, At1g32830, At2g14140, At4g03990
Length = 377
Score = 27.1 bits (57), Expect = 5.9
Identities = 21/98 (21%), Positives = 43/98 (43%)
Frame = +1
Query: 79 MFPKGMFIDNVVEVAKKELAWEVDYIREAECTRKFKTLLAQYPEYFVPDVIDELCAQEVI 258
+F G +DN+ V+K V +REA +F TL+ + F+ +++
Sbjct: 12 LFQPGSEVDNITRVSKHSSFKIVSTVREALEPIEFNTLM----DTFLGPIVEFAEMDLAF 67
Query: 259 TTELIDGVPLDKLFDASYETRVDIASKIMKLCLREMFV 372
+T ++ + ++ + E A + M+ LRE +
Sbjct: 68 STHIVHHLLQRRILTNNDELWFVFADQPMRFSLREFII 105
>At1g78050.1 68414.m09095 phosphoglycerate/bisphosphoglycerate
mutase family protein similar to SP|P31217
Phosphoglycerate mutase 1 (EC 5.4.2.1) {Escherichia coli
O157:H7}; contains Pfam profile PF00300:
phosphoglycerate mutase family
Length = 332
Score = 27.1 bits (57), Expect = 5.9
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +1
Query: 229 IDELCAQEVITTELIDGVPLDKLF 300
+D+L +QEV T +L GVPL +F
Sbjct: 270 LDDLTSQEVTTLDLSTGVPLLYIF 293
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,048,309
Number of Sequences: 28952
Number of extensions: 172474
Number of successful extensions: 524
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 524
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 742437000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -