Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0690
         (338 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   2.6  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   2.6  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    20   6.0  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    20   8.0  

>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 172 SYSFVTNPLTYCYYNMNK 119
           SY+F+    TY YY  N+
Sbjct: 23  SYNFLQEKTTYEYYENNQ 40


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 172 SYSFVTNPLTYCYYNMNK 119
           SY+F+    TY YY  N+
Sbjct: 14  SYNFLQEKTTYEYYENNQ 31


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -1

Query: 113 FIIYTFPRNVVNSL 72
           F++  +PR VVN++
Sbjct: 172 FVVQVYPRLVVNTI 185


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 6/19 (31%), Positives = 10/19 (52%)
 Frame = -2

Query: 184 GPVASYSFVTNPLTYCYYN 128
           G +  ++ +     YCYYN
Sbjct: 260 GCLIQFNTIVFSFCYCYYN 278


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,368
Number of Sequences: 336
Number of extensions: 698
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6558670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)