Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0690
         (338 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF099915-1|AAC68771.1|  460|Caenorhabditis elegans Hypothetical ...    29   0.64 
AF003389-1|AAC71138.2|  865|Caenorhabditis elegans Hypothetical ...    29   0.85 

>AF099915-1|AAC68771.1|  460|Caenorhabditis elegans Hypothetical
           protein E02H9.6 protein.
          Length = 460

 Score = 29.5 bits (63), Expect = 0.64
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = -1

Query: 185 RAGRVVQFCNQSINLLLL*YEQNIFIIYTFPRNVVNSL*RYHKLIYFI 42
           R GR    C  S+ L  L     I +I+ FPR++++   R+H + Y +
Sbjct: 302 RNGRTATVCPSSLTLTKL-----IDVIFIFPRSIISIFFRHHTIRYLL 344


>AF003389-1|AAC71138.2|  865|Caenorhabditis elegans Hypothetical
           protein F23H11.2 protein.
          Length = 865

 Score = 29.1 bits (62), Expect = 0.85
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +1

Query: 142 KLMDWLQNCTTRPARVEGPISGASDFY 222
           K  DW+QNCT R      P++G   FY
Sbjct: 673 KRPDWIQNCTARQTHF-NPVTGPIRFY 698


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,293,761
Number of Sequences: 27780
Number of extensions: 60878
Number of successful extensions: 162
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 162
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 429601520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)