Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0687
         (588 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032631-11|CAB63341.1|  975|Caenorhabditis elegans Hypothetical...    31   0.46 
Z68215-2|CAA92451.2|  452|Caenorhabditis elegans Hypothetical pr...    28   4.3  
AF016427-10|AAB65348.1|  301|Caenorhabditis elegans Hypothetical...    28   4.3  
U55857-2|AAA98027.2|  397|Caenorhabditis elegans Hypothetical pr...    28   5.7  
AC024785-5|AAF60596.1|  577|Caenorhabditis elegans C-type lectin...    27   7.5  
Z70203-2|CAA94105.1|  685|Caenorhabditis elegans Hypothetical pr...    27   9.9  
U64840-6|AAB04964.1|  574|Caenorhabditis elegans Hypothetical pr...    27   9.9  
AL034543-2|CAA22515.1| 1696|Caenorhabditis elegans Hypothetical ...    27   9.9  

>AL032631-11|CAB63341.1|  975|Caenorhabditis elegans Hypothetical
           protein Y106G6H.12 protein.
          Length = 975

 Score = 31.5 bits (68), Expect = 0.46
 Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +2

Query: 233 NAKSVIRKNRTKPDKVE-IESPGNS*RRGISWFL 331
           N KSV+ K   +P +V+ IES GN   R ISW L
Sbjct: 700 NEKSVVMKKFDRPGRVKGIESDGNCFYRAISWCL 733


>Z68215-2|CAA92451.2|  452|Caenorhabditis elegans Hypothetical
           protein C53B4.2 protein.
          Length = 452

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +1

Query: 343 IAALSPLDARVKLFHSYLGLIPNLSQFTTSE 435
           I A SPLD + K+F   +   P LS++TT E
Sbjct: 189 IKATSPLDDKSKMFMDRIVKKPYLSKYTTKE 219


>AF016427-10|AAB65348.1|  301|Caenorhabditis elegans Hypothetical
           protein F32D1.7 protein.
          Length = 301

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -3

Query: 418 GKGSGSDQDMNGIASPSRPAEIMPLSQRTQKPRYSP 311
           G GSGS  D +G + P+R +  +P +     PR  P
Sbjct: 159 GSGSGSGNDSSGSSGPTRMSGQVPSTSGPPPPRPPP 194


>U55857-2|AAA98027.2|  397|Caenorhabditis elegans Hypothetical
           protein K08D10.9 protein.
          Length = 397

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 21/72 (29%), Positives = 27/72 (37%)
 Frame = +1

Query: 292 PREFLTEGNIVVFGFVGIAALSPLDARVKLFHSYLGLIPNLSQFTTSESAQAGVPQAPGK 471
           P  F T+ N   F  V  A        +  F S+      LS +  S S   G    PG 
Sbjct: 288 PSLFHTKPNGTFFAGVDFAVTVQNHGPIDTFQSFY-----LSWYNASSSTNGGFYGYPGS 342

Query: 472 SKMERNSILRTG 507
              E+NS +R G
Sbjct: 343 PSNEKNSTIRAG 354


>AC024785-5|AAF60596.1|  577|Caenorhabditis elegans C-type lectin
           protein 73 protein.
          Length = 577

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +2

Query: 194 SDPMYEVMIGGWGNAKSVIRKNRTK 268
           S+P YEV++GG   A  V+ +N+ K
Sbjct: 334 SNPHYEVVLGGKKTANFVVEENKIK 358


>Z70203-2|CAA94105.1|  685|Caenorhabditis elegans Hypothetical
           protein C05G5.2 protein.
          Length = 685

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 19/70 (27%), Positives = 28/70 (40%)
 Frame = -2

Query: 506 PVRSIEFRSIFDFPGACGTPACADSDVVNWERFGIRPRYEWNSFTLASSGDNAAIPTNPK 327
           P+  +      D P    TP    + V+    F  +P  +       S  D  ++PT PK
Sbjct: 513 PIEPVVVPKAVDIPAPKPTPVTNTTAVIPKVEFK-KPAAKSLFDDSDSDSDLFSLPTKPK 571

Query: 326 TTIFPSVKNS 297
           T I P  +NS
Sbjct: 572 TPIAPKNRNS 581


>U64840-6|AAB04964.1|  574|Caenorhabditis elegans Hypothetical
           protein ZC317.7 protein.
          Length = 574

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
 Frame = -3

Query: 370 SRPAEIMPLSQRTQKPRYSPPL--RI----PGAFNFNLIGLGSIFPDDALSVSPASNH 215
           +RPA I P+S    KP  SP +  RI    PG+   +++GL  + P + +S  P+ +H
Sbjct: 72  ARPAPIAPVSSDASKPSNSPSVASRILTIPPGS---HVLGLPGVDPRE-ISTMPSQSH 125


>AL034543-2|CAA22515.1| 1696|Caenorhabditis elegans Hypothetical
           protein Y81G3A.3 protein.
          Length = 1696

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +1

Query: 400 LIPNLSQFTTSESAQAGVPQAPGKSKMERNSILRTG*SI 516
           LIP + + +  +S+   VP  PGK K+ +   L+TG S+
Sbjct: 561 LIPIVEETSDDDSSLGAVP-IPGKEKIGKKGKLKTGKSL 598


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,172,203
Number of Sequences: 27780
Number of extensions: 324875
Number of successful extensions: 952
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 952
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)