Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0685
         (496 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   2.6  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   8.1  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    21   8.1  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   8.1  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = +1

Query: 154 VTIFKRNEENRSLALRTTPGGEMSVMQKR 240
           VT+  +N ++      ++ GG  +V Q R
Sbjct: 141 VTVVSKNNDDEQYVWESSAGGSFTVTQDR 169


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +1

Query: 391 GFQEGRGPSHAKGAHRTPLEAH 456
           GFQ G+G          P+EAH
Sbjct: 171 GFQPGKGLGKDLQGISAPVEAH 192


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = +3

Query: 390 WFPRRSWS 413
           W PRR WS
Sbjct: 119 WCPRREWS 126


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = +3

Query: 390 WFPRRSWS 413
           W PRR WS
Sbjct: 275 WCPRREWS 282


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,337
Number of Sequences: 336
Number of extensions: 2035
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11630247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)