Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0685
(496 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33597| Best HMM Match : No HMM Matches (HMM E-Value=.) 84 7e-17
SB_54654| Best HMM Match : rve (HMM E-Value=0.0035) 29 2.8
SB_31773| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_31541| Best HMM Match : EGF (HMM E-Value=0) 28 4.9
SB_11299| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_57969| Best HMM Match : zf-CCHC (HMM E-Value=0.0097) 27 6.4
SB_22716| Best HMM Match : zf-CCHC (HMM E-Value=0.0097) 27 6.4
SB_22220| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.4
SB_31230| Best HMM Match : C1_1 (HMM E-Value=0.92) 27 6.4
SB_43904| Best HMM Match : Lipase (HMM E-Value=5e-07) 27 8.5
SB_38953| Best HMM Match : 7tm_1 (HMM E-Value=1.4) 27 8.5
SB_4970| Best HMM Match : IBV_3C (HMM E-Value=2.2) 27 8.5
SB_50449| Best HMM Match : Drf_DAD (HMM E-Value=0.00043) 27 8.5
SB_16748| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
SB_5722| Best HMM Match : Ion_trans (HMM E-Value=0) 27 8.5
>SB_33597| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 609
Score = 83.8 bits (198), Expect = 7e-17
Identities = 31/50 (62%), Positives = 42/50 (84%)
Frame = +1
Query: 235 KRQHCYLCDLPRMPWAMLHEFSEAVCRGCVNYEGADRIEVVLETARQLKR 384
+RQHC+LCDLP PWA+LH+FSE +CRGC NYEGA+RIE ++ +R L++
Sbjct: 6 QRQHCFLCDLPHSPWAILHDFSEPICRGCCNYEGAERIEDIIHYSRLLRK 55
>SB_54654| Best HMM Match : rve (HMM E-Value=0.0035)
Length = 466
Score = 28.7 bits (61), Expect = 2.8
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Frame = +1
Query: 79 SNVKFCVFICDYHGDSVFSRRHNKSVTIFKRNEENRSLALRTTP---GGEMSVMQKRQHC 249
SN + C + D G SV R + K +E +SLA P GG+ + +K Q
Sbjct: 235 SNPRSCQVLTDA-GSSVRRNRRHLIHLGEKTDEATKSLANDPLPAANGGDAAPSEKHQVL 293
Query: 250 YLCDLPRMPWAMLHEF 297
C + P LH+F
Sbjct: 294 AACPVDTSPIQTLHQF 309
>SB_31773| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 874
Score = 27.9 bits (59), Expect = 4.9
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +1
Query: 94 CVFICDY-HGDSVFSRRHNKSVTIFKR 171
CV +C Y H SVF RR++ SV + R
Sbjct: 689 CVVMCRYVHNVSVFMRRYDTSVRVVMR 715
>SB_31541| Best HMM Match : EGF (HMM E-Value=0)
Length = 268
Score = 27.9 bits (59), Expect = 4.9
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +2
Query: 161 FSRETKKTDLSHSALHPAARCR*CRNGNTATSATCPA-CRGQCCMSFQKQCVEG 319
F+ +TD+ A +P A C +G + + TCPA G C + C G
Sbjct: 68 FTGTNCETDMDECADNPCANGGTCMDGINSFTCTCPAGYTGSKCETDIDDCASG 121
Score = 27.9 bits (59), Expect = 4.9
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +2
Query: 161 FSRETKKTDLSHSALHPAARCR*CRNGNTATSATCPA-CRGQCCMSFQKQCVEG 319
F+ +TD+ A +P A C +G + + TCPA G C + C G
Sbjct: 144 FTGANCETDMDECAGNPCANGGTCMDGINSFTCTCPAGYTGSKCETDIDDCASG 197
>SB_11299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3762
Score = 27.9 bits (59), Expect = 4.9
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +2
Query: 221 CR*CRNGNTATSATCPACR 277
C C NTA S TCPAC+
Sbjct: 2121 CETCLVRNTAESKTCPACQ 2139
>SB_57969| Best HMM Match : zf-CCHC (HMM E-Value=0.0097)
Length = 410
Score = 27.5 bits (58), Expect = 6.4
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +2
Query: 158 QFSRETKKTDLSHSALHPAARCR*CRNGNTATSATCPACRGQC 286
Q SR+ TD S S HP +C+ C + CPA + C
Sbjct: 220 QESRKPPHTDSSKSNPHP--KCKFCHRLHPRAKEKCPAWQKTC 260
>SB_22716| Best HMM Match : zf-CCHC (HMM E-Value=0.0097)
Length = 396
Score = 27.5 bits (58), Expect = 6.4
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2
Query: 158 QFSRETKKTDLSHSALHPAARCR*CRNGNTATSATCPACRGQC 286
Q R+ TD+S S HP +C+ C+ + CPA + C
Sbjct: 31 QEPRKPPHTDISKSNPHP--KCKFCQRLHPRAKEKCPAWQKTC 71
>SB_22220| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 369
Score = 27.5 bits (58), Expect = 6.4
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +2
Query: 158 QFSRETKKTDLSHSALHPAARCR*CRNGNTATSATCPACRGQC 286
Q SR+ TD S S HP +C+ C + CPA + C
Sbjct: 165 QESRKPPHTDSSKSNPHP--KCKFCHRLHPRAKEKCPAWQKTC 205
>SB_31230| Best HMM Match : C1_1 (HMM E-Value=0.92)
Length = 174
Score = 27.5 bits (58), Expect = 6.4
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 307 VCRGCVNYEGADRIEVVLETARQLKRAHGFQ 399
+C G +NYE AD V L+ R+ +A G Q
Sbjct: 112 LCAGKLNYESADSDVVELKAHRKAPQAAGIQ 142
>SB_43904| Best HMM Match : Lipase (HMM E-Value=5e-07)
Length = 408
Score = 27.1 bits (57), Expect = 8.5
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +1
Query: 256 CDLPRMPWAMLHEFSEAVCRGCVN 327
C + P A +H+F +C CVN
Sbjct: 88 CAMRAFPCASMHDFERGLCFDCVN 111
>SB_38953| Best HMM Match : 7tm_1 (HMM E-Value=1.4)
Length = 324
Score = 27.1 bits (57), Expect = 8.5
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +1
Query: 136 RRHNKSVTIFKRNEENRSLALRTTPGGEMSVMQKRQHC 249
+ HNK T R + + ++ T G +S+M + Q C
Sbjct: 160 KEHNKGSTERTREDSEINFSVNTPDGESISMMPREQQC 197
>SB_4970| Best HMM Match : IBV_3C (HMM E-Value=2.2)
Length = 1094
Score = 27.1 bits (57), Expect = 8.5
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -2
Query: 267 GQVAEVAVLPFLHHRHLAAGCSAECERSVFFVSLENCH 154
G+V V V +L + +A S C RS+ F + CH
Sbjct: 677 GEVCRVIVPLYLLSQVVATWRSLSCNRSLIFAVSDGCH 714
>SB_50449| Best HMM Match : Drf_DAD (HMM E-Value=0.00043)
Length = 801
Score = 27.1 bits (57), Expect = 8.5
Identities = 19/51 (37%), Positives = 21/51 (41%)
Frame = +2
Query: 167 RETKKTDLSHSALHPAARCR*CRNGNTATSATCPACRGQCCMSFQKQCVEG 319
R K+ L + A R R C N A CPA R QCC K EG
Sbjct: 10 RTPKQRKLDDGSSCDAKRYRKCEN------AGCPAERPQCCACLSKGHKEG 54
>SB_16748| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 280
Score = 27.1 bits (57), Expect = 8.5
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +2
Query: 161 FSRETKKTDLSHSALHPAARCR*CRNGNTATSATCPA-CRGQCCMSFQKQC 310
F+ + +TD++ A P A C +G + TCPA G C + +C
Sbjct: 196 FTDKNCETDINECAGDPCANGGTCTDGINGFTCTCPAGYNGSTCDNDIDEC 246
>SB_5722| Best HMM Match : Ion_trans (HMM E-Value=0)
Length = 1236
Score = 27.1 bits (57), Expect = 8.5
Identities = 9/28 (32%), Positives = 15/28 (53%), Gaps = 3/28 (10%)
Frame = +2
Query: 239 GNTATSATCPA---CRGQCCMSFQKQCV 313
GN+ CP+ C CC S+++ C+
Sbjct: 482 GNSKVRDCCPSFCYCESNCCTSYKESCI 509
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,588,524
Number of Sequences: 59808
Number of extensions: 279872
Number of successful extensions: 924
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 924
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1062812967
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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