Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0682
(543 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 268 2e-72
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 124 4e-29
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 124 4e-29
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 124 4e-29
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 124 4e-29
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 124 4e-29
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 124 4e-29
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 124 4e-29
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 123 7e-29
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 121 4e-28
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 111 4e-25
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 106 9e-24
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 105 2e-23
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 93 1e-19
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 83 2e-16
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 60 1e-09
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 60 1e-09
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 59 2e-09
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 56 1e-08
AF047661-5|AAU05544.1| 822|Caenorhabditis elegans Hypothetical ... 28 5.0
AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical ... 28 5.0
Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical pr... 27 6.6
Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical pr... 27 6.6
Z29094-1|CAA82338.1| 147|Caenorhabditis elegans Hypothetical pr... 27 6.6
AF303257-1|AAG50215.1| 147|Caenorhabditis elegans G10 protein h... 27 6.6
Z81133-6|CAJ85766.1| 398|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z81133-5|CAB03442.2| 1838|Caenorhabditis elegans Hypothetical pr... 27 8.7
U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in bl... 27 8.7
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 268 bits (657), Expect = 2e-72
Identities = 128/172 (74%), Positives = 143/172 (83%), Gaps = 6/172 (3%)
Frame = +1
Query: 46 LPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKE-TAKVGDQSTR---RMTKAVEDLDF 213
LPACVID GTGYTKLG+AGN EPQFIIPS IA+K+ A Q+ R R+ ++DLDF
Sbjct: 6 LPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGIDDLDF 65
Query: 214 FIGDEAFE--ATGYSVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLN 387
FIGDEA AT Y+VKYP+RHGIVEDWDLMERY EQC+FKYLRAEPEDH FL+TEPPLN
Sbjct: 66 FIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLN 125
Query: 388 TPENREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDS 543
TPENREY AEIMFESFNVPGLYIAVQAVLAL ASW SR + ER+ TG+V+DS
Sbjct: 126 TPENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDS 177
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 124 bits (299), Expect = 4e-29
Identities = 68/169 (40%), Positives = 98/169 (57%), Gaps = 1/169 (0%)
Frame = +1
Query: 40 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 219
D + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 220 GDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPE 396
GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Query: 397 NREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDS 543
NRE + +IMFE+FN P +Y+A+QAVL+L AS ++ TG+V+DS
Sbjct: 116 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGVVLDS 156
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 124 bits (299), Expect = 4e-29
Identities = 69/169 (40%), Positives = 98/169 (57%), Gaps = 1/169 (0%)
Frame = +1
Query: 40 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 219
D + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 220 GDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPE 396
GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Query: 397 NREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDS 543
NRE + +IMFE+FN P +Y+A+QAVL+L AS ++ TGIV+DS
Sbjct: 116 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDS 156
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 124 bits (299), Expect = 4e-29
Identities = 68/169 (40%), Positives = 98/169 (57%), Gaps = 1/169 (0%)
Frame = +1
Query: 40 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 219
D + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 220 GDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPE 396
GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Query: 397 NREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDS 543
NRE + +IMFE+FN P +Y+A+QAVL+L AS ++ TG+V+DS
Sbjct: 116 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGVVLDS 156
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 124 bits (299), Expect = 4e-29
Identities = 68/169 (40%), Positives = 98/169 (57%), Gaps = 1/169 (0%)
Frame = +1
Query: 40 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 219
D + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 220 GDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPE 396
GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Query: 397 NREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDS 543
NRE + +IMFE+FN P +Y+A+QAVL+L AS ++ TG+V+DS
Sbjct: 116 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGVVLDS 156
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 124 bits (299), Expect = 4e-29
Identities = 68/169 (40%), Positives = 98/169 (57%), Gaps = 1/169 (0%)
Frame = +1
Query: 40 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 219
D + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 220 GDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPE 396
GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Query: 397 NREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDS 543
NRE + +IMFE+FN P +Y+A+QAVL+L AS ++ TG+V+DS
Sbjct: 116 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGVVLDS 156
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 124 bits (299), Expect = 4e-29
Identities = 68/169 (40%), Positives = 98/169 (57%), Gaps = 1/169 (0%)
Frame = +1
Query: 40 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 219
D + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 220 GDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPE 396
GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Query: 397 NREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDS 543
NRE + +IMFE+FN P +Y+A+QAVL+L AS ++ TG+V+DS
Sbjct: 116 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGVVLDS 156
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 124 bits (299), Expect = 4e-29
Identities = 68/169 (40%), Positives = 98/169 (57%), Gaps = 1/169 (0%)
Frame = +1
Query: 40 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 219
D + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 220 GDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPE 396
GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Query: 397 NREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDS 543
NRE + +IMFE+FN P +Y+A+QAVL+L AS ++ TG+V+DS
Sbjct: 116 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGVVLDS 156
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 123 bits (297), Expect = 7e-29
Identities = 68/169 (40%), Positives = 98/169 (57%), Gaps = 1/169 (0%)
Frame = +1
Query: 40 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 219
D + A ++D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DDVAALILDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 220 GDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPE 396
GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Query: 397 NREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDS 543
NRE + +IMFE+FN P +Y+A+QAVL+L AS ++ TGIV+DS
Sbjct: 116 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDS 156
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 121 bits (291), Expect = 4e-28
Identities = 67/171 (39%), Positives = 98/171 (57%), Gaps = 1/171 (0%)
Frame = +1
Query: 34 MGDHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDF 213
M + + A V+D G+G K GFAG+ P+ + PS VG + + + D
Sbjct: 1 MEEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDS 52
Query: 214 FIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNT 390
++GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN
Sbjct: 53 YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNP 112
Query: 391 PENREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDS 543
NRE + +IMFE+FN P +Y+ +QAVL+L AS ++ TGIV+D+
Sbjct: 113 KSNREKMTQIMFETFNTPAMYVNIQAVLSLYASGRT--------TGIVLDT 155
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 111 bits (266), Expect = 4e-25
Identities = 61/154 (39%), Positives = 89/154 (57%), Gaps = 1/154 (0%)
Frame = +1
Query: 85 KLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFEATGY-SVKY 261
+ GFAG+ P+ + PS VG + + + D ++GDEA G ++KY
Sbjct: 5 RAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKY 56
Query: 262 PVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLAEIMFESFNV 441
P+ HGIV +WD ME+ + LR PE+H L+TE PLN NRE + +IMFE+FN
Sbjct: 57 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 116
Query: 442 PGLYIAVQAVLALAASWKSRTSAERTFTGIVVDS 543
P +Y+A+QAVL+L AS ++ TG+V+DS
Sbjct: 117 PAMYVAIQAVLSLYASGRT--------TGVVLDS 142
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 106 bits (255), Expect = 9e-24
Identities = 67/164 (40%), Positives = 95/164 (57%), Gaps = 2/164 (1%)
Frame = +1
Query: 58 VIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFE 237
VID G+G K GFAG ++P+ ++ VG R+ D D FIG +A
Sbjct: 12 VIDNGSGVIKAGFAGEQQPK--------VRFANFVGRPKYHRVMAGGLDGDIFIGPKAES 63
Query: 238 ATG-YSVKYPVRHGIVEDWDLMERYIEQCVFK-YLRAEPEDHHFLMTEPPLNTPENREYL 411
G +S++YP+ HGIV +W ME+ E + L+ PE+H L+T+ PLN +NRE
Sbjct: 64 NRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERS 123
Query: 412 AEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDS 543
AEI FE+FNVP LYI +QAVL+L A+ ++ TG+V+DS
Sbjct: 124 AEIFFETFNVPALYIQMQAVLSLYATGRT--------TGVVLDS 159
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 105 bits (252), Expect = 2e-23
Identities = 52/113 (46%), Positives = 73/113 (64%), Gaps = 1/113 (0%)
Frame = +1
Query: 208 DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPL 384
D ++GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PL
Sbjct: 8 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 67
Query: 385 NTPENREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDS 543
N NRE + +IMFE+FN P +Y+A+QAVL+L AS ++ TG+V+DS
Sbjct: 68 NPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGVVLDS 112
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 93.1 bits (221), Expect = 1e-19
Identities = 58/167 (34%), Positives = 88/167 (52%), Gaps = 5/167 (2%)
Frame = +1
Query: 58 VIDVGTGYTKLGFAGNKEPQFIIPSTIA---IKETAKVGDQSTRRMTKAVEDLDFFIGDE 228
V+D GTG+ K G+AG P I PS + ++ T +VG+ +E D +G+E
Sbjct: 10 VVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGN---------IEIKDLMVGEE 60
Query: 229 AFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVF-KYLRAEPEDHHFLMTEPPLNTPENR 402
+ + YP+ +GIV +WD M + + L +P++ L+TEPPLN NR
Sbjct: 61 CSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNR 120
Query: 403 EYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDS 543
E + ++MFE + +Y+AVQAVL L A+ TG+VVDS
Sbjct: 121 EKMFQVMFEQYGFNSIYVAVQAVLTL--------YAQGLLTGVVVDS 159
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 82.6 bits (195), Expect = 2e-16
Identities = 48/164 (29%), Positives = 80/164 (48%), Gaps = 10/164 (6%)
Frame = +1
Query: 37 GDHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETA--------KVGDQSTRRMTK 192
GD + V D G+ ++GFAG + P+ IPS IA++E + ++ +
Sbjct: 8 GDEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQ 67
Query: 193 AVEDLDFFIGDEAF--EATGYSVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFL 366
+ +FFIG +++ ++ G++EDW+L E+ +E L + P +H L
Sbjct: 68 TKREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVL 127
Query: 367 MTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLALAASWKS 498
+E N RE L EIMFE F VP Y++ VL+ A ++
Sbjct: 128 FSESSWNDRARREKLTEIMFEKFQVPAYYLSKNVVLSCFAQGRT 171
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 59.7 bits (138), Expect = 1e-09
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Frame = +1
Query: 40 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 219
D + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 220 GDEAFEATG-YSVKYPVRHGIVEDWDLMER 306
GDEA G ++KYP+ HGIV +WD ME+
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEK 85
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 59.7 bits (138), Expect = 1e-09
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Frame = +1
Query: 40 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 219
D + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 220 GDEAFEATG-YSVKYPVRHGIVEDWDLMER 306
GDEA G ++KYP+ HGIV +WD ME+
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEK 85
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 59.3 bits (137), Expect = 2e-09
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Frame = +1
Query: 40 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 219
D + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 220 GDEAFEATG-YSVKYPVRHGIVEDWDLMER 306
GDEA G ++KYP+ HGIV +WD ME+
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEK 85
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 56.4 bits (130), Expect = 1e-08
Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Frame = +1
Query: 40 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 219
D + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 220 GDEAFEATG-YSVKYPVRHGIVEDWDLM 300
GDEA G ++KYP+ HGIV +WD M
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>AF047661-5|AAU05544.1| 822|Caenorhabditis elegans Hypothetical
protein M70.4 protein.
Length = 822
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -3
Query: 358 DDLRVPHGDT*TRTVRCTFPLNPSLLRYRGAQDTLQSI 245
+DL +P G+ + +F L SL ++ G +DT S+
Sbjct: 418 EDLNIPQGNNWANPIHTSFCLPKSLHKWAGRRDTSSSM 455
>AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical
protein Y5H2A.4 protein.
Length = 558
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -3
Query: 541 CLLRCQ*RCVQQTYVTSMTQPKQERLVQQC 452
C+ +CQ +C QQ T Q Q + QQC
Sbjct: 149 CMPQCQQQCTQQCVQTQPIQQCQPQCQQQC 178
>Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical
protein T01D3.3b protein.
Length = 1011
Score = 27.5 bits (58), Expect = 6.6
Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Frame = +3
Query: 438 CARPLHCCTSRSCF-GCVMEVTYV 506
CA PL C S CF GCV YV
Sbjct: 582 CANPLGRCGSGQCFSGCVCRQPYV 605
>Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical
protein T01D3.3a protein.
Length = 802
Score = 27.5 bits (58), Expect = 6.6
Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Frame = +3
Query: 438 CARPLHCCTSRSCF-GCVMEVTYV 506
CA PL C S CF GCV YV
Sbjct: 373 CANPLGRCGSGQCFSGCVCRQPYV 396
>Z29094-1|CAA82338.1| 147|Caenorhabditis elegans Hypothetical
protein C07A9.2 protein.
Length = 147
Score = 27.5 bits (58), Expect = 6.6
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1
Query: 265 VRHGIVEDWDLMERYIEQCVFKYLRAEPEDH 357
VR E WDL+E +EQ K AE E H
Sbjct: 10 VRKSPPEGWDLIEPTLEQFEAKMREAETEPH 40
>AF303257-1|AAG50215.1| 147|Caenorhabditis elegans G10 protein
homolog protein.
Length = 147
Score = 27.5 bits (58), Expect = 6.6
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1
Query: 265 VRHGIVEDWDLMERYIEQCVFKYLRAEPEDH 357
VR E WDL+E +EQ K AE E H
Sbjct: 10 VRKSPPEGWDLIEPTLEQFEAKMREAETEPH 40
>Z81133-6|CAJ85766.1| 398|Caenorhabditis elegans Hypothetical
protein T28B8.3b protein.
Length = 398
Score = 27.1 bits (57), Expect = 8.7
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = -1
Query: 318 LFDVPFH*IPVFYDTVAHRILYRVSCGFKSFITDEKIQIFDSLSH 184
L ++P IP DT+ H+I+ ++ F+ D+KI I SLSH
Sbjct: 55 LINIPSRFIPDSLDTIIHKIIDKIP--DLKFMEDQKI-IRASLSH 96
>Z81133-5|CAB03442.2| 1838|Caenorhabditis elegans Hypothetical protein
T28B8.3a protein.
Length = 1838
Score = 27.1 bits (57), Expect = 8.7
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = -1
Query: 318 LFDVPFH*IPVFYDTVAHRILYRVSCGFKSFITDEKIQIFDSLSH 184
L ++P IP DT+ H+I+ ++ F+ D+KI I SLSH
Sbjct: 1495 LINIPSRFIPDSLDTIIHKIIDKIP--DLKFMEDQKI-IRASLSH 1536
>U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 2 protein.
Length = 572
Score = 27.1 bits (57), Expect = 8.7
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -3
Query: 541 CLLRCQ*RCVQQTYVTSMTQPKQERLVQQC 452
C+ +CQ +C QQ T Q Q + QQC
Sbjct: 127 CMPQCQQQCSQQCVQTQPVQHCQSQCHQQC 156
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,080,657
Number of Sequences: 27780
Number of extensions: 276988
Number of successful extensions: 726
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 706
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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