Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0682
(543 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 192 1e-49
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 130 6e-31
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 125 2e-29
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 124 5e-29
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 124 5e-29
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 123 7e-29
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 123 7e-29
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 123 7e-29
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 122 1e-28
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 122 1e-28
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 122 1e-28
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 101 4e-22
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 94 5e-20
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 94 6e-20
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 93 1e-19
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 67 6e-12
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 67 6e-12
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 59 2e-09
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 52 3e-07
At3g55120.1 68416.m06121 chalcone-flavanone isomerase / chalcone... 29 1.5
At5g58610.1 68418.m07345 PHD finger transcription factor, putative 27 6.1
At4g12870.1 68417.m02015 gamma interferon responsive lysosomal t... 27 6.1
At3g45800.1 68416.m04957 hypothetical protein 27 8.1
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 192 bits (469), Expect = 1e-49
Identities = 94/175 (53%), Positives = 125/175 (71%), Gaps = 11/175 (6%)
Frame = +1
Query: 49 PACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVE-------DL 207
PA VID GTGYTK+GFAGN EP FI+P+ +A+ E+ +S+ + T + DL
Sbjct: 7 PAIVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSKSSSKATWQTQHNAGVAADL 66
Query: 208 DFFIGDEAF----EATGYSVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTE 375
DF+IGDEA ++ +++ YP+ HG VEDWD MERY +QC+F YLR +PEDH+FL+TE
Sbjct: 67 DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTE 126
Query: 376 PPLNTPENREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVD 540
PL PE+REY EI+FE+FNVPGLYIAV +VLALAA + T+++ TG+VVD
Sbjct: 127 SPLTPPESREYTGEILFETFNVPGLYIAVNSVLALAAGY---TTSKCEMTGVVVD 178
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 130 bits (314), Expect = 6e-31
Identities = 73/171 (42%), Positives = 99/171 (57%), Gaps = 1/171 (0%)
Frame = +1
Query: 34 MGDHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDF 213
+GD A V D GTG K GFAG+ P+ + PS VG R + +++ D
Sbjct: 4 LGDESVAIVCDNGTGMVKAGFAGDDAPRAVFPSV--------VGRPRHRGVMVGMDEKDT 55
Query: 214 FIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNT 390
F+GDEA G S+KYP+ HG+V +WD ME+ + LR EPE+H L+TE PLN
Sbjct: 56 FVGDEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNP 115
Query: 391 PENREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDS 543
NRE + +IMFESF P +YI +QAVL+L +S ++ TGIV+DS
Sbjct: 116 KVNREKMTQIMFESFAFPSMYIGIQAVLSLYSSGRT--------TGIVLDS 158
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 125 bits (301), Expect = 2e-29
Identities = 70/170 (41%), Positives = 97/170 (57%), Gaps = 1/170 (0%)
Frame = +1
Query: 37 GDHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFF 216
G+ + V D GTG K GFAG+ P+ + PS VG + + D +
Sbjct: 4 GEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAY 55
Query: 217 IGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTP 393
+GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN
Sbjct: 56 VGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 115
Query: 394 ENREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDS 543
NRE + +IMFE+FNVP +Y+A+QAVL+L AS ++ TGIV+DS
Sbjct: 116 ANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRT--------TGIVLDS 157
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 124 bits (298), Expect = 5e-29
Identities = 69/170 (40%), Positives = 96/170 (56%), Gaps = 1/170 (0%)
Frame = +1
Query: 37 GDHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFF 216
G+ + V D GTG K GFAG+ P+ + PS VG + + D +
Sbjct: 4 GEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAY 55
Query: 217 IGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTP 393
+GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN
Sbjct: 56 VGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPK 115
Query: 394 ENREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDS 543
NRE + +IMFE+FN P +Y+A+QAVL+L AS ++ TGIV+DS
Sbjct: 116 ANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRT--------TGIVLDS 157
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 124 bits (298), Expect = 5e-29
Identities = 69/170 (40%), Positives = 96/170 (56%), Gaps = 1/170 (0%)
Frame = +1
Query: 37 GDHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFF 216
G+ + V D GTG K GFAG+ P+ + PS VG + + D +
Sbjct: 4 GEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAY 55
Query: 217 IGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTP 393
+GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN
Sbjct: 56 VGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPK 115
Query: 394 ENREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDS 543
NRE + +IMFE+FN P +Y+A+QAVL+L AS ++ TGIV+DS
Sbjct: 116 ANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRT--------TGIVLDS 157
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 123 bits (297), Expect = 7e-29
Identities = 69/170 (40%), Positives = 96/170 (56%), Gaps = 1/170 (0%)
Frame = +1
Query: 37 GDHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFF 216
G+ + V D GTG K GFAG+ P+ + PS VG + + D +
Sbjct: 4 GEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAY 55
Query: 217 IGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTP 393
+GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN
Sbjct: 56 VGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 115
Query: 394 ENREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDS 543
NRE + +IMFE+FN P +Y+A+QAVL+L AS ++ TGIV+DS
Sbjct: 116 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDS 157
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 123 bits (297), Expect = 7e-29
Identities = 69/170 (40%), Positives = 96/170 (56%), Gaps = 1/170 (0%)
Frame = +1
Query: 37 GDHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFF 216
G+ + V D GTG K GFAG+ P+ + PS VG + + D +
Sbjct: 4 GEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAY 55
Query: 217 IGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTP 393
+GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN
Sbjct: 56 VGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 115
Query: 394 ENREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDS 543
NRE + +IMFE+FN P +Y+A+QAVL+L AS ++ TGIV+DS
Sbjct: 116 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDS 157
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 123 bits (297), Expect = 7e-29
Identities = 69/170 (40%), Positives = 96/170 (56%), Gaps = 1/170 (0%)
Frame = +1
Query: 37 GDHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFF 216
G+ + V D GTG K GFAG+ P+ + PS VG + + D +
Sbjct: 4 GEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAY 55
Query: 217 IGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTP 393
+GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN
Sbjct: 56 VGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 115
Query: 394 ENREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDS 543
NRE + +IMFE+FN P +Y+A+QAVL+L AS ++ TGIV+DS
Sbjct: 116 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDS 157
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 122 bits (295), Expect = 1e-28
Identities = 68/169 (40%), Positives = 95/169 (56%), Gaps = 1/169 (0%)
Frame = +1
Query: 40 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 219
D + V D GTG K GFAG+ P+ + PS VG + + D ++
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSV--------VGRPRHHGVMVGMNQKDAYV 56
Query: 220 GDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPE 396
GDEA G ++KYP+ HG+V +WD ME+ + LR PE+H L+TE PLN
Sbjct: 57 GDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKA 116
Query: 397 NREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDS 543
NRE + +IMFE+FN P +Y+A+QAVL+L AS ++ TGIV+DS
Sbjct: 117 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRT--------TGIVLDS 157
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 122 bits (295), Expect = 1e-28
Identities = 68/169 (40%), Positives = 95/169 (56%), Gaps = 1/169 (0%)
Frame = +1
Query: 40 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 219
D + V D GTG K GFAG+ P+ + PS VG + + D ++
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSV--------VGRPRHHGVMVGMNQKDAYV 56
Query: 220 GDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPE 396
GDEA G ++KYP+ HG+V +WD ME+ + LR PE+H L+TE PLN
Sbjct: 57 GDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKA 116
Query: 397 NREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDS 543
NRE + +IMFE+FN P +Y+A+QAVL+L AS ++ TGIV+DS
Sbjct: 117 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRT--------TGIVLDS 157
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 122 bits (295), Expect = 1e-28
Identities = 68/169 (40%), Positives = 95/169 (56%), Gaps = 1/169 (0%)
Frame = +1
Query: 40 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 219
D + V D GTG K GFAG+ P+ + PS VG + + D ++
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSV--------VGRPRHHGVMVGMNQKDAYV 56
Query: 220 GDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPE 396
GDEA G ++KYP+ HG+V +WD ME+ + LR PE+H L+TE PLN
Sbjct: 57 GDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKA 116
Query: 397 NREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDS 543
NRE + +IMFE+FN P +Y+A+QAVL+L AS ++ TGIV+DS
Sbjct: 117 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRT--------TGIVLDS 157
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 101 bits (241), Expect = 4e-22
Identities = 58/169 (34%), Positives = 85/169 (50%), Gaps = 1/169 (0%)
Frame = +1
Query: 40 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 219
D+ V D GTGY K GFAG P + P + + + + + K D +
Sbjct: 2 DNKNVVVCDNGTGYVKCGFAGENFPTSVFPCVVG-RPLLRYEESLMEQQVK-----DIVV 55
Query: 220 GDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPE 396
G+ E + YPV +GIV++WD ME + + L+ P D L+T+PPLN +
Sbjct: 56 GETCSELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSK 115
Query: 397 NREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDS 543
NRE + E MFE +N G++I +QAVL L A+ TG+V+DS
Sbjct: 116 NREKMIETMFEKYNFAGVFIQIQAVLTL--------YAQGLLTGLVIDS 156
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 94.3 bits (224), Expect = 5e-20
Identities = 50/148 (33%), Positives = 81/148 (54%), Gaps = 1/148 (0%)
Frame = +1
Query: 58 VIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFE 237
V D G G + GFAG++ P+ + P + R + + ++G+E
Sbjct: 5 VCDKGHGMVQAGFAGDEAPKVVFPCVVG-------------RPRDGLNPNESYVGEEGHA 51
Query: 238 ATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLA 414
++K P+ HGIV +WD ME+ + LR +PE+H L+TE P N NRE +
Sbjct: 52 NRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLTEAPYNPKANREKMT 111
Query: 415 EIMFESFNVPGLYIAVQAVLALAASWKS 498
+IMFESF+VP +Y+++Q+VL L +S ++
Sbjct: 112 QIMFESFDVPAMYVSMQSVLYLYSSGRT 139
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 93.9 bits (223), Expect = 6e-20
Identities = 43/98 (43%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Frame = +1
Query: 208 DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPL 384
D F+GD+A +G ++ YP+ HG+V +WD ME+ + LR PE+H L+TE PL
Sbjct: 8 DLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPL 67
Query: 385 NTPENREYLAEIMFESFNVPGLYIAVQAVLALAASWKS 498
N +RE + +IMFE+F VP +YI +QA L+L AS ++
Sbjct: 68 NPKADREKMTQIMFETFAVPSMYIGMQAALSLHASGRT 105
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 93.1 bits (221), Expect = 1e-19
Identities = 53/169 (31%), Positives = 85/169 (50%), Gaps = 15/169 (8%)
Frame = +1
Query: 37 GDHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKE----------TAKVGDQSTRRM 186
GD + A V+D+G+ K G+AG P+ + PS I + + K S
Sbjct: 4 GDEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIGAVDGVEAMDVDVDSTKTNSNSEDSK 63
Query: 187 TKAVEDLD---FFIGDEA--FEATGYSVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPE 351
T++ ++ ++G +A + V P++ GIV DWDL++ E L +P
Sbjct: 64 TESEKEKSKRKLYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPT 123
Query: 352 DHHFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLALAASWKS 498
+H L+ EPPLNT + RE AE+MFE + VP L++A VL A+ ++
Sbjct: 124 EHPMLLAEPPLNTQQQREKAAELMFEKYKVPALFMAKNPVLTSFATGRA 172
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 67.3 bits (157), Expect = 6e-12
Identities = 49/149 (32%), Positives = 71/149 (47%), Gaps = 2/149 (1%)
Frame = +1
Query: 46 LPACVIDVGTGYTKLGFA-GNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIG 222
+ A V+D G+ + K G A ++ P IIPS + K G S T ED+
Sbjct: 1 MEALVVDAGSKFLKAGAAIPDQSPAMIIPSQM--KRMVDDGSSSADNPTTVFEDVTLD-- 56
Query: 223 DEAFEATGYSVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPEN- 399
P+ G++ DWD ME + V+ L E + ++ PL TP+
Sbjct: 57 -------------PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAI 103
Query: 400 REYLAEIMFESFNVPGLYIAVQAVLALAA 486
RE L ++MFE+FNV G Y + QAVL+L A
Sbjct: 104 REQLVQLMFETFNVSGFYASEQAVLSLYA 132
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 67.3 bits (157), Expect = 6e-12
Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 9/132 (6%)
Frame = +1
Query: 37 GDHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLD-- 210
GD + A V+D+G+ K G+AG P+ + PS + + + T+ ++ D
Sbjct: 4 GDEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKE 63
Query: 211 -----FFIGDEA--FEATGYSVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLM 369
+ G +A F + P + GIV DWD+++ + L +P +H L+
Sbjct: 64 KGKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLL 123
Query: 370 TEPPLNTPENRE 405
EPPLN+ + RE
Sbjct: 124 AEPPLNSQQQRE 135
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 58.8 bits (136), Expect = 2e-09
Identities = 42/142 (29%), Positives = 68/142 (47%), Gaps = 2/142 (1%)
Frame = +1
Query: 58 VIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFE 237
VID G Y ++G+AG EP+ + + + G+ T V DLD + + F+
Sbjct: 23 VIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKATGETVT-----IVGDLDPSMM-KYFD 76
Query: 238 ATGYSVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPE--DHHFLMTEPPLNTPENREYL 411
T + P +V +++ME YI F L A DH L+TE N ++R +
Sbjct: 77 CTRSGPRSPFDSNVVYQFEIME-YILDYAFDRLGANGSGIDHPILITECACNPVQSRSKM 135
Query: 412 AEIMFESFNVPGLYIAVQAVLA 477
AE++FE++ VP + V A +
Sbjct: 136 AELLFETYGVPAVAFGVDAAFS 157
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 51.6 bits (118), Expect = 3e-07
Identities = 44/163 (26%), Positives = 72/163 (44%), Gaps = 2/163 (1%)
Frame = +1
Query: 58 VIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFE 237
V+D G G K G G ++P +IP+ + ++K + T + DE +
Sbjct: 6 VLDNGGGLIKAGQGGERDPTTVIPNCLYKPLSSKKFIHPSPLTT---------LSDE-ID 55
Query: 238 ATGYSVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLAE 417
T +V+ P+ G + + DL L P L+TE PL+ P + E
Sbjct: 56 LTSAAVRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDE 115
Query: 418 IMFESFNVPGLYIA-VQAVLAL-AASWKSRTSAERTFTGIVVD 540
++FE F LYIA Q+++ L AS + + +T +VVD
Sbjct: 116 LVFEDFGFSSLYIAHPQSLVHLYEASRQPDSILSKTQCSLVVD 158
>At3g55120.1 68416.m06121 chalcone-flavanone isomerase / chalcone
isomerase (CHI) identical to SP|P41088
Length = 246
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 424 FESFNVPGLYIAVQAVLALAASWKSRTSAERT 519
F F V G+Y+ AV +L+ WK +T+ E T
Sbjct: 55 FVIFTVIGVYLEGNAVPSLSVKWKGKTTEELT 86
>At5g58610.1 68418.m07345 PHD finger transcription factor, putative
Length = 1065
Score = 27.5 bits (58), Expect = 6.1
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 313 RCTFPLNPSLLRYRGAQDTLQSIL 242
+C +PS LRY GA D+L IL
Sbjct: 763 QCELKYHPSCLRYDGACDSLDKIL 786
>At4g12870.1 68417.m02015 gamma interferon responsive lysosomal
thiol reductase family protein / GILT family protein
similar to SP|P13284 Gamma-interferon inducible
lysosomal thiol reductase precursor {Homo sapiens};
contains Pfam profile PF03227: Gamma interferon
inducible lysosomal thiol reductase (GILT)
Length = 229
Score = 27.5 bits (58), Expect = 6.1
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -1
Query: 279 DTVAHRILYRVSC-GFKSFITDEKIQIFDS 193
D V + Y C G +SFI DE +++FDS
Sbjct: 31 DKVELNLYYESLCPGCQSFIVDELVKVFDS 60
>At3g45800.1 68416.m04957 hypothetical protein
Length = 563
Score = 27.1 bits (57), Expect = 8.1
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +1
Query: 265 VRHGIVEDWDLMERYIEQCVFKYLRAE 345
+ H + E D ++ IE C++KY+ E
Sbjct: 114 ISHNVSETIDKVKNLIETCIYKYMSLE 140
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,299,574
Number of Sequences: 28952
Number of extensions: 254850
Number of successful extensions: 710
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 691
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1013649368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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