Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0680
(605 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_54915| Best HMM Match : CD225 (HMM E-Value=6.7) 61 8e-10
SB_51101| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_50949| Best HMM Match : AMP-binding (HMM E-Value=0) 53 2e-07
SB_7991| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 8e-07
SB_28869| Best HMM Match : AMP-binding (HMM E-Value=0) 48 6e-06
SB_48202| Best HMM Match : GARS_B (HMM E-Value=0.49) 41 7e-04
SB_33495| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_1852| Best HMM Match : WD40 (HMM E-Value=1.7) 40 0.002
SB_57182| Best HMM Match : AMP-binding (HMM E-Value=0) 36 0.034
SB_37108| Best HMM Match : AMP-binding (HMM E-Value=2e-09) 35 0.044
SB_54490| Best HMM Match : AMP-binding (HMM E-Value=4.2039e-45) 35 0.059
SB_18399| Best HMM Match : AMP-binding (HMM E-Value=0) 32 0.31
SB_48516| Best HMM Match : AMP-binding (HMM E-Value=0) 31 0.55
SB_8167| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.55
SB_16391| Best HMM Match : AMP-binding (HMM E-Value=1.5e-10) 31 0.72
SB_43771| Best HMM Match : AMP-binding (HMM E-Value=0.041) 30 1.3
SB_15617| Best HMM Match : Glycoprotein_G (HMM E-Value=4.8) 30 1.3
SB_58684| Best HMM Match : AMP-binding (HMM E-Value=0.36) 29 2.2
SB_6508| Best HMM Match : AMP-binding (HMM E-Value=2.8026e-45) 29 2.9
SB_48731| Best HMM Match : zf-C3HC4 (HMM E-Value=6.5e-08) 29 2.9
SB_42547| Best HMM Match : AMP-binding (HMM E-Value=1.1e-05) 28 5.1
SB_50366| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_39222| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_36622| Best HMM Match : Entericidin (HMM E-Value=1.2) 27 8.9
>SB_54915| Best HMM Match : CD225 (HMM E-Value=6.7)
Length = 149
Score = 60.9 bits (141), Expect = 8e-10
Identities = 25/63 (39%), Positives = 38/63 (60%)
Frame = +1
Query: 367 LSVKHKLPLLKAIVQWEGPVDTSIPGIYSWDQLLEIGAKEPDTQLNEILKSIAVNECCTL 546
+ V +LP LKA+VQ+ G ++ +Y+W+Q LE+G D L E + + N CCTL
Sbjct: 29 IEVWDRLPHLKAVVQYTGELEGKHENVYNWNQFLELGKTVADRVLQERMSQLVANRCCTL 88
Query: 547 VYT 555
+YT
Sbjct: 89 IYT 91
Score = 31.5 bits (68), Expect = 0.55
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +1
Query: 82 KADGKWHKITYKQYQDRVRIIAKAFLKLGLDRYHSVSILGFNSE 213
K + +W TY +Y + VRI AK+F+++ H +++ + E
Sbjct: 4 KRNDQWQHWTYSEYYEEVRIAAKSFIEVWDRLPHLKAVVQYTGE 47
>SB_51101| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1109
Score = 60.1 bits (139), Expect = 1e-09
Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 2/192 (1%)
Frame = +1
Query: 28 LLSRTTARYPNATALATKKADGKWHKITYKQYQDRVRIIAKAFLKLGLDRYHSVSILGFN 207
LL R TA PN AL + G +T+K+Y+D+ + IA L+LG+ R V ++ +
Sbjct: 9 LLDRHTAECPNKEALVYRDEKGNRKSLTFKEYKDQSQAIAARLLELGVVRGDMVLVMLPS 68
Query: 208 SEQWFIADLXXXXXXXXXXXXXTTNSADACFHCLESSRANICAVQDKKQLDKILSVKHKL 387
++ I ++ A L+ I + K++ +++S
Sbjct: 69 EFEFAIVEI--ALGRIGAIFVAVEFDAPEAVTILQDQIHCIFYSHESKEMQEVVSAIVDR 126
Query: 388 PLLKAIVQWEGPVDT--SIPGIYSWDQLLEIGAKEPDTQLNEILKSIAVNECCTLVYTSG 561
KA V + GP T + P +YS+ LLE L+++ + ++ +++TSG
Sbjct: 127 DHFKAAV-YVGPHTTPPNKPKVYSYSDLLEASEPYDLAVLSQVEAEVQFDDPFLIIHTSG 185
Query: 562 TVGPPKAVMLSH 597
+ G PK + +H
Sbjct: 186 STGKPKPALYTH 197
>SB_50949| Best HMM Match : AMP-binding (HMM E-Value=0)
Length = 569
Score = 53.2 bits (122), Expect = 2e-07
Identities = 43/191 (22%), Positives = 81/191 (42%), Gaps = 1/191 (0%)
Frame = +1
Query: 28 LLSRTTARYPNATALATKKADGKWHKITYKQYQDRVRIIAKAFLKLGLDRYHSVSILGFN 207
LL A+ PN AL + G +T+++Y+D+ + +A L+ GL R V +L N
Sbjct: 23 LLDHHAAKCPNKEALIYRDDSGNRTALTFREYKDQSQALAAGLLEKGLRRGDRVLVLLSN 82
Query: 208 SEQWFIADLXXXXXXXXXXXXXTTNSADACFHCLESSRANICAVQDKKQLDKILSV-KHK 384
S + F L + DA QD K + + V +
Sbjct: 83 SVE-FAVILLALTRLGAVPLFVELDVDDAILEMRGQVSGVFYTEQDSKVITAVTEVLDSE 141
Query: 385 LPLLKAIVQWEGPVDTSIPGIYSWDQLLEIGAKEPDTQLNEILKSIAVNECCTLVYTSGT 564
+ + I + + ++S+D LL+ + TQL++ + ++ +++TSG+
Sbjct: 142 IKIFLCIGSHDNMPNHK--KVHSYDALLQSFQDDDITQLHQAETEVQFDDPALVIFTSGS 199
Query: 565 VGPPKAVMLSH 597
G PK ++ +H
Sbjct: 200 TGRPKPILYTH 210
>SB_7991| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 561
Score = 50.8 bits (116), Expect = 8e-07
Identities = 41/190 (21%), Positives = 81/190 (42%), Gaps = 1/190 (0%)
Frame = +1
Query: 31 LSRTTARYPNATALATKKADGKWHKITYKQYQDRVRIIAKAFLKLGLDRYH-SVSILGFN 207
L + YP+ AL + + IT+KQYQ R +A L+LGL R ++S+L +
Sbjct: 27 LDEQASMYPDKEALVYRDEHFRRKTITFKQYQQRSHALAARLLELGLRRGDAAISMLPGD 86
Query: 208 SEQWFIADLXXXXXXXXXXXXXTTNSADACFHCLESSRANICAVQDKKQLDKILSVKHKL 387
E + + +++ +A IC Q + + H+
Sbjct: 87 IEYMVVNMALNRIGVNAVIIEPNADGTLPFLENIKNIKAVICCDQFPGVISAVQGFIHRK 146
Query: 388 PLLKAIVQWEGPVDTSIPGIYSWDQLLEIGAKEPDTQLNEILKSIAVNECCTLVYTSGTV 567
+ AIV P +YS++ L++ G + + L + + +++ +++TSG+
Sbjct: 147 SIKVAIVVGIAPEGDQ--RLYSYEDLVQQG-DDTSSALKQAQAEVQMDDHALVIFTSGST 203
Query: 568 GPPKAVMLSH 597
G PK + ++
Sbjct: 204 GIPKPIQFTN 213
>SB_28869| Best HMM Match : AMP-binding (HMM E-Value=0)
Length = 561
Score = 48.0 bits (109), Expect = 6e-06
Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 2/192 (1%)
Frame = +1
Query: 28 LLSRTTARYPNATALATKKADGKWHK--ITYKQYQDRVRIIAKAFLKLGLDRYHSVSILG 201
LL A P+ A+ + G H+ IT+KQYQ++ + +A L+LGL R V ++
Sbjct: 20 LLDEQAALRPDKEAIVYRDETGYNHRKSITFKQYQEQSQCLAIMLLELGLGRGDEVLLML 79
Query: 202 FNSEQWFIADLXXXXXXXXXXXXXTTNSADACFHCLESSRANICAVQDKKQLDKILSVKH 381
S ++ + + + DA E S +Q D +V
Sbjct: 80 ETSIEFIVFHMALNRIGAVALIVG-PHYDDA---VTELSGQISAVAFSSQQSDVTSAVSA 135
Query: 382 KLPLLKAIVQWEGPVDTSIPGIYSWDQLLEIGAKEPDTQLNEILKSIAVNECCTLVYTSG 561
+ +KA + + GP D +S++ LL G ++P L + + ++ ++TSG
Sbjct: 136 IVGDIKAAI-FVGPDDGVSTSCHSYETLLRSGKEKPRDVLIKAENEVQFDDLTVFIFTSG 194
Query: 562 TVGPPKAVMLSH 597
+ G PK +H
Sbjct: 195 STGIPKPCEYTH 206
>SB_48202| Best HMM Match : GARS_B (HMM E-Value=0.49)
Length = 293
Score = 41.1 bits (92), Expect = 7e-04
Identities = 35/177 (19%), Positives = 71/177 (40%), Gaps = 6/177 (3%)
Frame = +1
Query: 91 GKWHKITYKQYQDRVRIIAKAFLKLGLDRYHSVSILGF---NSEQWFIADLXXXXXXXXX 261
G + +TY + +R + +LG + + +G N +W + +
Sbjct: 104 GPYEWLTYNEVLNRASNVGSGLQELGSNDVEGDTFIGVYASNKIEWVLIEQACAMHAKVI 163
Query: 262 XXXXTTNSADACFHCLESSRANICAVQDKKQLDKILSVKHKLPLLKAIVQWEGPV--DTS 435
T DAC + ++ ++ V D ++ +L + P LK I++ V +
Sbjct: 164 TPLYDTLGPDACAFIINQAKMSM-VVCDAAKIPLLLQRADQCPTLKFIIKINPDVTSEEK 222
Query: 436 IPGIYSWDQLLEIGAKEPDTQLNEILKSIAV-NECCTLVYTSGTVGPPKAVMLSHDN 603
G + +++ E + + K + ++ + YTSGT G PK M++H N
Sbjct: 223 QEGERNGIKIISFSDVEAMGKAHPYEKKLPKPDDLAVVCYTSGTTGNPKGAMITHSN 279
>SB_33495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 609
Score = 39.5 bits (88), Expect = 0.002
Identities = 43/189 (22%), Positives = 76/189 (40%), Gaps = 1/189 (0%)
Frame = +1
Query: 28 LLSRTTARYPNATALATKKADGK-WHKITYKQYQDRVRIIAKAFLKLGLDRYHSVSILGF 204
L T A PN A +GK W T+K+ + IA F G + ++++
Sbjct: 89 LFESTAASLPNKPAFVF---EGKSW---TFKEADEFANRIANYFKSQGYAKGDVIALILE 142
Query: 205 NSEQWFIADLXXXXXXXXXXXXXTTNSADACFHCLESSRANICAVQDKKQLDKILSVKHK 384
N ++ + L T D+ HC+ ++ + + D ++ ++ K
Sbjct: 143 NRPEFILIWLGLSKIGVISALINTNLHQDSLLHCISAANSK-AIIFGSNFADSVVEIQDK 201
Query: 385 LPLLKAIVQWEGPVDTSIPGIYSWDQLLEIGAKEPDTQLNEILKSIAVNECCTLVYTSGT 564
LP +++IP + S DQ L + P ++ KS + +YTSGT
Sbjct: 202 LPENMLFYCHGNNGNSAIPAV-SLDQTLRDSS--PKKAVHSHQKSHL--DVLMYIYTSGT 256
Query: 565 VGPPKAVML 591
G PKA ++
Sbjct: 257 TGLPKAALI 265
>SB_1852| Best HMM Match : WD40 (HMM E-Value=1.7)
Length = 513
Score = 39.5 bits (88), Expect = 0.002
Identities = 42/203 (20%), Positives = 83/203 (40%), Gaps = 4/203 (1%)
Frame = +1
Query: 1 HEAPI---SVPGLLSRTTARYPNATALATKKADGKWHKITYKQYQDRVRIIAKAFLKLGL 171
+EAP+ ++ LL +++PN A+ + + +T+++Y+D+ R++A +LGL
Sbjct: 283 YEAPLEHRTLFQLLDHHASKFPNKEAIIYRDENNNRKSLTFQEYRDQSRVLAAKLTELGL 342
Query: 172 DRYHSVSILGFNSEQWFIADLXXXXXXXXXXXXXTTNSADACFHCLESSRANICAVQDKK 351
R H V L SE F A + D L + D
Sbjct: 343 RRGHLVLAL-LPSEMEF-AIVQMALGRIGAVFMALEKDDDLTVTNLRDQIHCVFYSVDSD 400
Query: 352 QLDKILSVKHKLPLLKAIVQWEGPV-DTSIPGIYSWDQLLEIGAKEPDTQLNEILKSIAV 528
++ + +L KA V + ++ IY + L L++ + +
Sbjct: 401 EMRDAIPKAVELDQFKAAVYIGSHITPPNMSKIYDYHALFLQEQTSDYLVLDQAGAEVKM 460
Query: 529 NECCTLVYTSGTVGPPKAVMLSH 597
+ +++TSG+ G PK +M ++
Sbjct: 461 EDPFVVLFTSGSTGRPKPIMYTN 483
>SB_57182| Best HMM Match : AMP-binding (HMM E-Value=0)
Length = 566
Score = 35.5 bits (78), Expect = 0.034
Identities = 17/59 (28%), Positives = 32/59 (54%)
Frame = +1
Query: 49 RYPNATALATKKADGKWHKITYKQYQDRVRIIAKAFLKLGLDRYHSVSILGFNSEQWFI 225
++P A+ AD +TY+Q +DR +A + + LGL R V ++G N+ ++ +
Sbjct: 31 QHPETEAIVIYDADMNRSAMTYRQLKDRSMHLAASLVTLGLSRGQHVILIGGNTLEYVV 89
>SB_37108| Best HMM Match : AMP-binding (HMM E-Value=2e-09)
Length = 488
Score = 35.1 bits (77), Expect = 0.044
Identities = 21/110 (19%), Positives = 43/110 (39%)
Frame = +1
Query: 79 KKADGKWHKITYKQYQDRVRIIAKAFLKLGLDRYHSVSILGFNSEQWFIADLXXXXXXXX 258
K+ G+++ +TY + R R + + LG ++ + W ++ L
Sbjct: 115 KEIRGEYNWLTYAEVDSRARNLGNGLITLGQQPRQNIVVFAETQADWMVSALSCFGFGFP 174
Query: 259 XXXXXTTNSADACFHCLESSRANICAVQDKKQLDKILSVKHKLPLLKAIV 408
T +A H + + N + D L K+ +V +L L+ I+
Sbjct: 175 VVTIYATLGDEAVAHGINETEVNF-VITDSVLLPKLAAVSGQLTQLQHII 223
>SB_54490| Best HMM Match : AMP-binding (HMM E-Value=4.2039e-45)
Length = 565
Score = 34.7 bits (76), Expect = 0.059
Identities = 40/170 (23%), Positives = 70/170 (41%), Gaps = 10/170 (5%)
Frame = +1
Query: 106 ITYKQYQDRVRIIAKAFLKLGLDRYHSVSIL---GFNSEQWFIADLXXXXXXXXXXXXXT 276
+T+ Q++ R A+A L++G+ R ++++ G W D
Sbjct: 46 LTFSQFRYLSRCFARALLEMGIRRGDRIALMLPNGLECANW--VDGGTCASWRHQRFPNY 103
Query: 277 TNSADACFHCLESSRA-NICAVQDKKQLDKILSVKHKLPLLKAIVQWEGPVDTS------ 435
+ C + S R N A Q ++ D +L VK + V VD S
Sbjct: 104 ASEEIKCRGVIRSLRIENKQAEQVQRATDGLLQVKGADGSAQIKVLITTDVDESLLDKDK 163
Query: 436 IPGIYSWDQLLEIGAKEPDTQLNEILKSIAVNECCTLVYTSGTVGPPKAV 585
+ S+ ++LE+G K L++ + + +V+TSG+ G PKAV
Sbjct: 164 VEKDKSYLEILELGKKLDCWTLDDAQSKVRPEDPVAVVFTSGSTGEPKAV 213
>SB_18399| Best HMM Match : AMP-binding (HMM E-Value=0)
Length = 1381
Score = 32.3 bits (70), Expect = 0.31
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 5/50 (10%)
Frame = +1
Query: 463 LLEIGAKEPDTQL-----NEILKSIAVNECCTLVYTSGTVGPPKAVMLSH 597
+L+I ++ +TQ+ N + + + C ++YTSG+ G PK V + H
Sbjct: 152 ILDIQSRALNTQIASKPSNALATVVPSSHLCYIIYTSGSTGQPKGVEIEH 201
>SB_48516| Best HMM Match : AMP-binding (HMM E-Value=0)
Length = 514
Score = 31.5 bits (68), Expect = 0.55
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +1
Query: 28 LLSRTTARYPNATALATKKADGKWHKITYKQYQDRVRIIAKAFLKLGLDR 177
LL T+ PN A+ + + T+K+ +D+ +I+A ++LGL+R
Sbjct: 20 LLDHNTSVSPNKEAIVFRDDGFNRNSYTFKKLKDQSQILAAKLIELGLER 69
>SB_8167| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 84
Score = 31.5 bits (68), Expect = 0.55
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 478 AKEPDTQLNEILKSIAVNECCTLVYTSGTVGPPKAVMLSH 597
A +P L ++ S + C ++YTSG+ G PK V + H
Sbjct: 17 ASKPSNALATVVPS---SHLCYIIYTSGSTGQPKGVEIEH 53
>SB_16391| Best HMM Match : AMP-binding (HMM E-Value=1.5e-10)
Length = 418
Score = 31.1 bits (67), Expect = 0.72
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +1
Query: 106 ITYKQYQDRVRIIAKAFLKLGLDRYHSVSILG 201
+TY+Q++DR IA + L LG+ R + V ++G
Sbjct: 46 MTYRQFKDRSMYIAASLLHLGVSRGNHVLLIG 77
>SB_43771| Best HMM Match : AMP-binding (HMM E-Value=0.041)
Length = 339
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/66 (25%), Positives = 30/66 (45%)
Frame = +1
Query: 31 LSRTTARYPNATALATKKADGKWHKITYKQYQDRVRIIAKAFLKLGLDRYHSVSILGFNS 210
L + R+PN A + + T+ + ++ +A + L LG+ R V I G N
Sbjct: 55 LDKVAERFPNREAYVCYEDK---ERATFAELREEADQLAASLLSLGIKRGDRVGIWGPNM 111
Query: 211 EQWFIA 228
+W I+
Sbjct: 112 REWVIS 117
>SB_15617| Best HMM Match : Glycoprotein_G (HMM E-Value=4.8)
Length = 554
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/66 (27%), Positives = 28/66 (42%)
Frame = -3
Query: 357 QLFLVLYGTDVSPRRFEAVEACVGRVGCIYSRRIPTSVDSCKIGDEPLFRVETEDTD*MV 178
Q FL D+ R FEAVE C GR S ++ + + V+ ++ + +
Sbjct: 54 QAFLATESPDIYKRTFEAVEQCGGRTSLYESADCLVDSENLVASNCCVMMVDAKERESLA 113
Query: 177 PV*TQF 160
P QF
Sbjct: 114 PATRQF 119
>SB_58684| Best HMM Match : AMP-binding (HMM E-Value=0.36)
Length = 237
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +1
Query: 544 LVYTSGTVGPPKAVMLSHDN 603
++Y+SGT G PK V+L+H N
Sbjct: 146 ILYSSGTTGLPKGVLLTHYN 165
>SB_6508| Best HMM Match : AMP-binding (HMM E-Value=2.8026e-45)
Length = 1038
Score = 29.1 bits (62), Expect = 2.9
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +1
Query: 346 KKQLDKILSVKHKLPLLKAIVQWEGPVDTSIPGI-YSWDQLLEIGAKEPDTQLNEILKSI 522
K +D+ + + P + Q + IPG +WDQ++E EP ++ + +
Sbjct: 230 KPLVDEAIKISSFKPSTVVLYQRDQCTGDIIPGRDITWDQVME--RAEP----HDCVPVL 283
Query: 523 AVNECCTLVYTSGTVGPPKAVM 588
A + L YTSGT G PK ++
Sbjct: 284 ATDPLYIL-YTSGTTGDPKGIV 304
>SB_48731| Best HMM Match : zf-C3HC4 (HMM E-Value=6.5e-08)
Length = 688
Score = 29.1 bits (62), Expect = 2.9
Identities = 29/87 (33%), Positives = 43/87 (49%)
Frame = +2
Query: 77 QKRLMGNGTKSPTSNTRIVSE**QKLS*NWV*TGTIQSVSSVSTLNNGSSPILQLSTLVG 256
QK+ M +GT SPT + VS + S N T ++S S T NG + L+ +
Sbjct: 122 QKQAMADGTFSPTDSG--VS---RSSSMNRQRTSHVRSASWSYTTGNGQINLSNLNPITS 176
Query: 257 MRREYIQPTRPTHASTASNRRGLTSVP 337
+ RE++ P+ AS +SN R S P
Sbjct: 177 VIREFV-PS--FGASRSSNSRTSVSSP 200
>SB_42547| Best HMM Match : AMP-binding (HMM E-Value=1.1e-05)
Length = 529
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 463 LLEIGAKEPDTQLNEILKSIAVNECCTLVYTSGTVGPPKAVMLS 594
LL++ P+ + K + N ++Y+SGT GPPK ++ S
Sbjct: 256 LLKLADDRPELEF----KQLPFNHPLFIMYSSGTTGPPKCMVHS 295
>SB_50366| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 224
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/35 (28%), Positives = 16/35 (45%)
Frame = -2
Query: 445 FQVWRYQQVLPIARWLSTREACASQKGSCPAVSCL 341
+ VW Q + + +W+S QKG P + L
Sbjct: 47 YMVWGRQPIRGLGKWISLMNMTQHQKGGLPVILAL 81
>SB_39222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1651
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +3
Query: 111 LQAIPGSCQNNSKSFLETGS 170
L PG C NN KS L TGS
Sbjct: 208 LPRFPGECLNNVKSLLTTGS 227
>SB_36622| Best HMM Match : Entericidin (HMM E-Value=1.2)
Length = 166
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 478 AKEPDTQLNEILKSIAVNECCTLVYTSGTVGPPKAVML 591
AK DT EI+ + EC T+ + + + PP+ +L
Sbjct: 107 AKNIDTTHTEIVADSVIKECKTIKHKTQNITPPEVPVL 144
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,983,319
Number of Sequences: 59808
Number of extensions: 459877
Number of successful extensions: 1085
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1028
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1083
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1475788250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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