Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0680
(605 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70751-1|CAA94751.1| 544|Caenorhabditis elegans Hypothetical pr... 52 2e-07
U00033-1|AAC48292.3| 731|Caenorhabditis elegans Hypothetical pr... 51 6e-07
AC024845-5|AAF60848.1| 719|Caenorhabditis elegans Hypothetical ... 50 1e-06
AL032658-2|CAA21744.1| 687|Caenorhabditis elegans Hypothetical ... 48 4e-06
Z70287-10|CAA94299.2| 339|Caenorhabditis elegans Hypothetical p... 47 9e-06
AF125955-10|AAV58866.1| 578|Caenorhabditis elegans Hypothetical... 43 2e-04
AF125955-9|AAV58865.1| 597|Caenorhabditis elegans Hypothetical ... 43 2e-04
AF125955-8|AAD14712.1| 623|Caenorhabditis elegans Hypothetical ... 43 2e-04
Z70287-2|CAA94298.2| 700|Caenorhabditis elegans Hypothetical pr... 42 3e-04
U39655-3|AAA80409.2| 718|Caenorhabditis elegans Fatty acid coa ... 42 3e-04
AF016686-12|AAB66234.1| 723|Caenorhabditis elegans Hypothetical... 42 3e-04
Z81071-2|CAB03012.1| 618|Caenorhabditis elegans Hypothetical pr... 37 0.013
Z35595-8|CAA84640.1| 540|Caenorhabditis elegans Hypothetical pr... 33 0.21
U58758-13|AAB93427.1| 565|Caenorhabditis elegans Hypothetical p... 33 0.21
AF016449-14|AAG23991.1| 517|Caenorhabditis elegans Hypothetical... 33 0.21
AL132904-18|CAC35853.1| 457|Caenorhabditis elegans Hypothetical... 32 0.28
Z81027-1|CAB02686.1| 566|Caenorhabditis elegans Hypothetical pr... 31 0.84
U23521-8|AAC46810.4| 505|Caenorhabditis elegans Hypothetical pr... 30 1.5
AF038604-2|AAB92013.1| 468|Caenorhabditis elegans Hypothetical ... 30 1.5
Z70684-10|CAA94602.2| 684|Caenorhabditis elegans Hypothetical p... 29 2.6
AF098989-3|AAK18953.2| 569|Caenorhabditis elegans Hypothetical ... 29 3.4
AF039039-1|AAB94180.2| 653|Caenorhabditis elegans Hypothetical ... 28 4.5
AL033514-34|CAA22113.1| 463|Caenorhabditis elegans Hypothetical... 28 5.9
AL033514-33|CAB54500.1| 480|Caenorhabditis elegans Hypothetical... 28 5.9
AF160493-1|AAD43348.1| 465|Caenorhabditis elegans DNA-binding p... 28 5.9
AF160492-1|AAD43347.1| 463|Caenorhabditis elegans DNA-binding p... 28 5.9
Z70206-2|CAA94126.2| 771|Caenorhabditis elegans Hypothetical pr... 27 7.9
L16559-10|AAA27927.1| 371|Caenorhabditis elegans Hypothetical p... 27 7.9
AF098997-10|AAC68712.2| 325|Caenorhabditis elegans Serpentine r... 27 7.9
AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical ... 27 7.9
>Z70751-1|CAA94751.1| 544|Caenorhabditis elegans Hypothetical
protein F11A3.1 protein.
Length = 544
Score = 52.4 bits (120), Expect = 2e-07
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = +1
Query: 355 LDKILSVKHKLPLLKAIVQWEGPVDTSIP-GIYSWDQLLEIGAKEPDTQLNEILKSIAVN 531
L K+L + P ++ I+ PV +S+P G+ SW++++ P T L ++ + N
Sbjct: 129 LPKVLLAVKQSPNIQKIIVIPKPVGSSLPAGVVSWNEVVST----PVTALPQVPIDVH-N 183
Query: 532 ECCTLVYTSGTVGPPKAVMLSHDN 603
+ L Y+SGT GPPK VMLSH N
Sbjct: 184 DLLVLPYSSGTTGPPKGVMLSHYN 207
>U00033-1|AAC48292.3| 731|Caenorhabditis elegans Hypothetical
protein F37C12.7 protein.
Length = 731
Score = 51.2 bits (117), Expect = 6e-07
Identities = 45/173 (26%), Positives = 72/173 (41%), Gaps = 8/173 (4%)
Frame = +1
Query: 109 TYKQYQDRVRIIAKAFLKLGLDRYH-SVSILGFNSEQWFIADLXXXXXXXXXXXXXTTNS 285
+YK+ + +V +A L + + V I W I L T
Sbjct: 143 SYKEVETQVARLAAGIKDLAHEEQNPKVVIFAETRADWLITALACFRANVTIVTVYATLG 202
Query: 286 ADACFHCLESSRANICAVQDKKQLDKILSVKHKLPLLKAIVQWEGPVDTSIPGIY----- 450
DA H + + A I V + L KI+++ K P LK ++ + PVD P
Sbjct: 203 EDAIAHAIGETEATIL-VTSSELLPKIVTLGKKCPTLKTLIYF-APVDQKAPAPELAPFR 260
Query: 451 -SWDQLLEIGAKEPDTQLNEILKSIAV-NECCTLVYTSGTVGPPKAVMLSHDN 603
+ +L + Q ++ +S AV ++ ++YTSGT G PK V+L H N
Sbjct: 261 DQFKHVLSLSGLLTRNQ-EQVKESTAVKSDIALIMYTSGTTGQPKGVILLHQN 312
>AC024845-5|AAF60848.1| 719|Caenorhabditis elegans Hypothetical
protein Y65B4BL.5 protein.
Length = 719
Score = 50.4 bits (115), Expect = 1e-06
Identities = 47/186 (25%), Positives = 77/186 (41%), Gaps = 11/186 (5%)
Frame = +1
Query: 79 KKADGKWHKI--TYKQYQDRVRIIAKAFLKLGLD--RYHSVSILGFNSEQWFIADLXXXX 246
K++DG + +Y +R ++ AF +LG+ ++ I N +W I +
Sbjct: 133 KQSDGSIPYVWESYNTILERADNVSVAFRELGVPTGNAENIGIYSKNRAEWIITEFATYN 192
Query: 247 XXXXXXXXXTTNSADACFHCLESSRANICAVQDKKQLDKILSVKHKLPLLKAIVQWEGPV 426
T ++A L + I D + +L K + P L +V E
Sbjct: 193 YSNVIVPIYETLGSEASIFILNQAEIKIVVCDDISKATGLLKFKEQCPSLSTLVVMEPVT 252
Query: 427 D-----TSIPGI--YSWDQLLEIGAKEPDTQLNEILKSIAVNECCTLVYTSGTVGPPKAV 585
D S G+ +++ L +IG K T+ I + + T+ YTSGT G PK V
Sbjct: 253 DELKTTASSLGVEVLTFEDLEKIG-KNAKTRPAHIPPT--PEDLATICYTSGTTGTPKGV 309
Query: 586 MLSHDN 603
ML+H N
Sbjct: 310 MLTHAN 315
>AL032658-2|CAA21744.1| 687|Caenorhabditis elegans Hypothetical
protein Y76A2B.3 protein.
Length = 687
Score = 48.4 bits (110), Expect = 4e-06
Identities = 41/182 (22%), Positives = 80/182 (43%), Gaps = 10/182 (5%)
Frame = +1
Query: 88 DGKWHKITYKQYQDRVRIIAKAFL-KLGLDRYHS--VSILGFNSEQWFIADLXXXXXXXX 258
D + +TY ++ + ++ + + GL ++ + I NS QW ++ +
Sbjct: 99 DADYEFLTYDDVHEQAKNLSMTLVHEFGLTPANTTNIGIYARNSPQWLVSAVACVEQSMV 158
Query: 259 XXXXXTTNSADACFHCLESSRANICAVQDKKQLDKILSVKHKLPLLKAIVQWEGPVD--- 429
T A+A + + ++ V K+ + ++ + +P LK I+ + +
Sbjct: 159 VVPLYDTLGAEAATFIISQAEISVVIVDSFKKAESLIKNRENMPTLKNIIVIDSADELKD 218
Query: 430 -TSIPG---IYSWDQLLEIGAKEPDTQLNEILKSIAVNECCTLVYTSGTVGPPKAVMLSH 597
T+I + S L +G++ P T N + K ++ + YTSGT G PK VML+H
Sbjct: 219 GTAIIDTIRVESLTNALNLGSRYPFT--NNLPKP---DDNYIICYTSGTTGTPKGVMLTH 273
Query: 598 DN 603
N
Sbjct: 274 SN 275
>Z70287-10|CAA94299.2| 339|Caenorhabditis elegans Hypothetical
protein R09E10.4a protein.
Length = 339
Score = 47.2 bits (107), Expect = 9e-06
Identities = 42/180 (23%), Positives = 80/180 (44%), Gaps = 10/180 (5%)
Frame = +1
Query: 94 KWHKITYKQYQDRVRIIAKAFLKLGLDRYH--SVSILGFNSEQWFIADLXXXXXXXXXXX 267
+W ITY Q + +++A KLG+D ++ I N +W ++D+
Sbjct: 109 EWEWITYDQAFEISDNVSQAIRKLGIDTGDETNIGIYSKNRPEWILSDMAIHNFSNVSVP 168
Query: 268 XXTTNSADACFHCLESSRANICAVQDKKQLDKILSVKHKLPLLKAIVQWEGPVDTSIP-- 441
T + D + ++ + + +++ K L LK IVQ++ D
Sbjct: 169 LYDTITNDDMHYITNLCEISLIFADSEDKTTQLVRDKSYLSNLKYIVQFDNVSDEMKRVA 228
Query: 442 -----GIYSWDQLLEIGAKEPDT-QLNEILKSIAVNECCTLVYTSGTVGPPKAVMLSHDN 603
++S+++ +E+G K+ + +++A T+ +TSGT G PK VML+H N
Sbjct: 229 EKNNFQLWSFNEFVEMGKKQKHRPHVPPTPETLA-----TISFTSGTTGRPKGVMLTHLN 283
>AF125955-10|AAV58866.1| 578|Caenorhabditis elegans Hypothetical
protein F46E10.1c protein.
Length = 578
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/59 (30%), Positives = 32/59 (54%)
Frame = +1
Query: 427 DTSIPGIYSWDQLLEIGAKEPDTQLNEILKSIAVNECCTLVYTSGTVGPPKAVMLSHDN 603
D PG + + ++++G +E L++I + ++ + YTSGT G PK L+H N
Sbjct: 174 DKIYPGAWKYTDVMKMGTEEDRHHLSKIERETQPDDSLNIQYTSGTTGQPKGATLTHHN 232
>AF125955-9|AAV58865.1| 597|Caenorhabditis elegans Hypothetical
protein F46E10.1b protein.
Length = 597
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/59 (30%), Positives = 32/59 (54%)
Frame = +1
Query: 427 DTSIPGIYSWDQLLEIGAKEPDTQLNEILKSIAVNECCTLVYTSGTVGPPKAVMLSHDN 603
D PG + + ++++G +E L++I + ++ + YTSGT G PK L+H N
Sbjct: 193 DKIYPGAWKYTDVMKMGTEEDRHHLSKIERETQPDDSLNIQYTSGTTGQPKGATLTHHN 251
>AF125955-8|AAD14712.1| 623|Caenorhabditis elegans Hypothetical
protein F46E10.1a protein.
Length = 623
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/59 (30%), Positives = 32/59 (54%)
Frame = +1
Query: 427 DTSIPGIYSWDQLLEIGAKEPDTQLNEILKSIAVNECCTLVYTSGTVGPPKAVMLSHDN 603
D PG + + ++++G +E L++I + ++ + YTSGT G PK L+H N
Sbjct: 219 DKIYPGAWKYTDVMKMGTEEDRHHLSKIERETQPDDSLNIQYTSGTTGQPKGATLTHHN 277
>Z70287-2|CAA94298.2| 700|Caenorhabditis elegans Hypothetical
protein R09E10.3 protein.
Length = 700
Score = 41.9 bits (94), Expect = 3e-04
Identities = 43/184 (23%), Positives = 80/184 (43%), Gaps = 12/184 (6%)
Frame = +1
Query: 88 DGK--WHKITYKQYQDRVRIIAKAFLKLGLD--RYHSVSILGFNSEQWFIADLXXXXXXX 255
DGK W I+Y Q + ++A KLG++ + I N +W ++++
Sbjct: 107 DGKLEWEWISYDQAFETSDHASQAIRKLGIEIGEESKIGIYSNNRPEWILSEMAIHNFSN 166
Query: 256 XXXXXXTTNSADACFHCLESSRANICAVQDKKQLDKILSVKHKLPLLKAIVQWEGPVDTS 435
T + D + ++ V + + +++ K L LK IVQ+ D
Sbjct: 167 VSVPLYDTITNDDMHYITNLCEISLMFVDAEIKTKQLIRDKSYLSSLKYIVQFNECSDDI 226
Query: 436 IP-------GIYSWDQLLEIGAKEPDT-QLNEILKSIAVNECCTLVYTSGTVGPPKAVML 591
++S+++ +E+G K+ + +++A T+ +TSGT G PK VML
Sbjct: 227 KEMARENDFRLWSFNEFVEMGKKQKHRPHVPPTPETLA-----TISFTSGTTGRPKGVML 281
Query: 592 SHDN 603
+H N
Sbjct: 282 THLN 285
>U39655-3|AAA80409.2| 718|Caenorhabditis elegans Fatty acid coa
synthetase familyprotein 17 protein.
Length = 718
Score = 41.9 bits (94), Expect = 3e-04
Identities = 40/180 (22%), Positives = 67/180 (37%), Gaps = 9/180 (5%)
Frame = +1
Query: 91 GKWHKITYKQYQDRVRIIAKAFLKLGLDRYHSVSILGFNSEQWFIADLXXXXXXXXXXXX 270
G +H +Y Q RV +IA LG + + E+W L
Sbjct: 133 GDYHWRSYAQVDKRVNMIASGLTSLGQQEKEPIILFAETREEWMTTALACMKMNFPIATM 192
Query: 271 XTTNSADACFHCLESSRANICAVQDKKQLDKILSVKHKLPLLKAIVQWEG--------PV 426
T +A + A + ++ + ++ I+ ++ V
Sbjct: 193 YATLGDEAVQFAINEVGAKTIFTSEALISKVKKAMSNGATSIENIIFFDSVDPASRGESV 252
Query: 427 DTSIP-GIYSWDQLLEIGAKEPDTQLNEILKSIAVNECCTLVYTSGTVGPPKAVMLSHDN 603
D +P + S+DQLL G P ++ ++ ++YTSGT G PK VM+SH N
Sbjct: 253 DVDLPFTLLSFDQLLSRGEPYPVPTRSK------KDDLAFIMYTSGTTGNPKGVMISHQN 306
>AF016686-12|AAB66234.1| 723|Caenorhabditis elegans Hypothetical
protein R07C3.4 protein.
Length = 723
Score = 41.9 bits (94), Expect = 3e-04
Identities = 42/183 (22%), Positives = 81/183 (44%), Gaps = 13/183 (7%)
Frame = +1
Query: 94 KWHKITYKQYQDRVRIIAKAFLKLGLD--RYHSVSILGFNSEQWFIADLXXXXXXXXXXX 267
+W ITY+Q + +++A KLG++ ++ I N +W ++D+
Sbjct: 107 EWEWITYEQAFEISDNVSQAIRKLGIEIGDKSNIGIYSKNRPEWVLSDMAIHNFSNVSVP 166
Query: 268 XXT----------TNSADACFHCLESSRANICAVQDKKQLDKILSVKHKLPLLKAIVQWE 417
TN + ++S ++DK L K S+K+ + K + +
Sbjct: 167 IYDNIPNEDMHYITNLCEIPLMFVDSEDKTTQLIKDKTYLSK--SLKYIVQFDKVSDEMK 224
Query: 418 GPVDTSIPGIYSWDQLLEIGAK-EPDTQLNEILKSIAVNECCTLVYTSGTVGPPKAVMLS 594
+++ ++S+D+ +E+G K E +++A T+ +TSGT G PK ML+
Sbjct: 225 AMAESNNFQLWSFDEFVELGKKHEHRPHAPPTPETLA-----TISFTSGTTGRPKGAMLT 279
Query: 595 HDN 603
H N
Sbjct: 280 HLN 282
>Z81071-2|CAB03012.1| 618|Caenorhabditis elegans Hypothetical
protein F28F8.2 protein.
Length = 618
Score = 36.7 bits (81), Expect = 0.013
Identities = 19/73 (26%), Positives = 35/73 (47%)
Frame = +1
Query: 379 HKLPLLKAIVQWEGPVDTSIPGIYSWDQLLEIGAKEPDTQLNEILKSIAVNECCTLVYTS 558
H +P L+ IV + D + G + + L+ +L ++ + + +E + +TS
Sbjct: 197 HDIPELRHIVLYGD--DVPVHGAWVYSDLIHAAGSAERAKLEDMDRKLRPDEPVNMQFTS 254
Query: 559 GTVGPPKAVMLSH 597
GT G PK L+H
Sbjct: 255 GTTGHPKGATLTH 267
Score = 28.3 bits (60), Expect = 4.5
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +1
Query: 109 TYKQYQDRVRIIAKAFLKLGLDRYHSVSILGFNSEQWFI 225
TY+++ VR +A + LGL++ V + G N +W +
Sbjct: 88 TYEEFYHDVRQMAASLYTLGLEKGDRVGVWGPNYYEWVV 126
>Z35595-8|CAA84640.1| 540|Caenorhabditis elegans Hypothetical
protein C01G6.7 protein.
Length = 540
Score = 32.7 bits (71), Expect = 0.21
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +1
Query: 529 NECCTLVYTSGTVGPPKAVMLSHDN 603
N+ L Y+SGT G PK VM+SH N
Sbjct: 178 NDIVFLPYSSGTTGKPKGVMISHLN 202
>U58758-13|AAB93427.1| 565|Caenorhabditis elegans Hypothetical
protein ZK1127.2 protein.
Length = 565
Score = 32.7 bits (71), Expect = 0.21
Identities = 43/185 (23%), Positives = 75/185 (40%), Gaps = 3/185 (1%)
Frame = +1
Query: 58 NATALATKKADGKWHKITYKQYQDRVRIIAKAFLKLGLDRYHSVSILGFNSEQWFIADLX 237
N A+ A+ K YK + V +A A +KLG + V+ F + F+ +
Sbjct: 32 NKDAVCFIDAETTTKKKLYKDVEPTVNSLATALVKLGF-KPGDVASQAFPNCPEFLVAML 90
Query: 238 XXXXXXXXXXXXTTNSADACFHCLESSRANICAV-QDKKQLDKILSVKHKLPLLKAIVQW 414
+ D L+ +N V D+ +L +I K P ++ I+
Sbjct: 91 AVMKCGGAMSNASAIFTDYELQ-LQFCDSNTSIVFTDEDRLARIRRATAKCPGVRKIICL 149
Query: 415 EG-PVDTSIP-GIYSWDQLLEIGAKEPDTQLNEILKSIAVNECCTLVYTSGTVGPPKAVM 588
P+ T P + + +L + PD +N +++++ L Y+SGT G PK
Sbjct: 150 RTFPLRTEFPENVLDYVEL----TQTPDQPIN---VNVSMDSIALLPYSSGTTGRPKGCQ 202
Query: 589 LSHDN 603
L+H N
Sbjct: 203 LTHRN 207
>AF016449-14|AAG23991.1| 517|Caenorhabditis elegans Hypothetical
protein C50H11.1 protein.
Length = 517
Score = 32.7 bits (71), Expect = 0.21
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +1
Query: 469 EIGAKEPDTQLNEILKSIAVNECCTLVYTSGTVGPPKAVMLSH 597
E G ++ T + + KS A C +TSGT G PK +LSH
Sbjct: 161 EAGKRKACTMIEHVEKSNAATIC----FTSGTTGAPKGAVLSH 199
>AL132904-18|CAC35853.1| 457|Caenorhabditis elegans Hypothetical
protein Y111B2A.24 protein.
Length = 457
Score = 32.3 bits (70), Expect = 0.28
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +2
Query: 179 TIQSVSSVSTLNNGSSPILQLSTLVGMRREYIQPTRPTHASTASN 313
++ S+ + ST +PIL+ STL + Y+ P RP S+AS+
Sbjct: 150 SVTSIPAASTSTTTPTPILRPSTLQIPAQSYVAPPRPRIGSSASS 194
>Z81027-1|CAB02686.1| 566|Caenorhabditis elegans Hypothetical
protein AH10.1 protein.
Length = 566
Score = 30.7 bits (66), Expect = 0.84
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 487 PDTQLNEILKSIAVNECCTLVYTSGTVGPPKAVMLSHDN 603
PD +N ++ A+ L Y+SGT G PK L+H N
Sbjct: 172 PDQPINVVVSPDAI---ALLPYSSGTTGRPKGCQLTHKN 207
>U23521-8|AAC46810.4| 505|Caenorhabditis elegans Hypothetical
protein F41C3.3 protein.
Length = 505
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +1
Query: 469 EIGAKEPDTQLNEILKSIAVNECCTLVYTSGTVGPPKAVMLSH 597
E G+ T + + KS + C YTSGT G PK +L+H
Sbjct: 149 EAGSLNACTMIEHVEKSDPASVC----YTSGTTGLPKGAILTH 187
>AF038604-2|AAB92013.1| 468|Caenorhabditis elegans Hypothetical
protein B0546.3 protein.
Length = 468
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +3
Query: 90 WEMAQNHLQAIPGSCQNNSKSFLETGSRQVPFSQYPRFQL 209
WE Q AI S Q N++S LE G + QYP +L
Sbjct: 137 WETLQRFNLAIVASIQGNNESLLEMGFTRELGHQYPGIRL 176
>Z70684-10|CAA94602.2| 684|Caenorhabditis elegans Hypothetical
protein F28D1.9 protein.
Length = 684
Score = 29.1 bits (62), Expect = 2.6
Identities = 36/164 (21%), Positives = 60/164 (36%), Gaps = 1/164 (0%)
Frame = +1
Query: 109 TYKQYQDRVRIIAKAFLKLGLDRYHSVSILGFNSEQWFIADLXXXXXXXXXXXXXTTNSA 288
TY ++ A F LG V++ NS ++ A + +
Sbjct: 138 TYAEFNAHCNRYANYFQGLGYRSGDVVALYMENSVEFVAAWMGLAKIGVVTAWINSNLKR 197
Query: 289 DACFHCLESSRANICAVQDKKQLDKILSVKHKLPLLKAIVQWEGPVDTSIPGIYSWDQLL 468
+ HC+ +S+ Q + ++ KL ++ I + G + + L
Sbjct: 198 EQLVHCITASKTKAIITSVTLQNIMLDAIDQKLFDVEGIEVYSVGEPKKNSGFKNLKKKL 257
Query: 469 EIG-AKEPDTQLNEILKSIAVNECCTLVYTSGTVGPPKAVMLSH 597
+ EP T KSI C +YTSGT G PKA ++ H
Sbjct: 258 DAQITTEPKTLDIVDFKSIL----C-FIYTSGTTGMPKAAVMKH 296
>AF098989-3|AAK18953.2| 569|Caenorhabditis elegans Hypothetical
protein F47G6.2 protein.
Length = 569
Score = 28.7 bits (61), Expect = 3.4
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = +1
Query: 385 LPLLKAIVQWEGPVDTSIPGIYSWDQLLEIGAKEPDTQLNEILKSIAVNECCTLVYTSGT 564
LP L ++ E D G ++ ++ +KE +L + K + C L +T GT
Sbjct: 173 LPKLTHVILAEE--DHKHAGTFTLSEVFLKSSKEKIAKLPDFSKWSSHKLAC-LQFTLGT 229
Query: 565 VGPPKAVMLSH 597
G PK + LSH
Sbjct: 230 TGAPKLIALSH 240
>AF039039-1|AAB94180.2| 653|Caenorhabditis elegans Hypothetical
protein T08B1.6 protein.
Length = 653
Score = 28.3 bits (60), Expect = 4.5
Identities = 39/198 (19%), Positives = 77/198 (38%), Gaps = 8/198 (4%)
Frame = +1
Query: 28 LLSRTTARYPNATALATKKADGKWHKITYKQYQDRVRIIAK---AFLKLGLDRYHSVSIL 198
+L+R+ PNA L + +G+ TY++ + II A ++ + I
Sbjct: 47 VLTRSAQLNPNAP-LFGESVNGRHVYTTYREAVEEATIIGSGIVAIMQKNQSTNKLIGIA 105
Query: 199 GFNSEQWFIADLXXXXXXXXXXXXXTTNSADACFHCLESSRANICAVQDKKQLDKILSVK 378
G +S ++ + + +++ + I ++ K+ + LS K
Sbjct: 106 GIHSRKYMHTMHGISGFDLTTVPLYHQSKLETLCDIIDNCKLEIIFCENAKRAEGFLSSK 165
Query: 379 --HKLPLLKAIVQWEGPVDTSIPG---IYSWDQLLEIGAKEPDTQLNEILKSIAVNECCT 543
+L LK ++ + + S D+ EIG + + ++ V
Sbjct: 166 LGDRLRSLKTLIILDKTTTLQKHDDVEVMSLDEFKEIGKRNKRNPVKPKPETTYV----- 220
Query: 544 LVYTSGTVGPPKAVMLSH 597
+ +TSGT G PK V +SH
Sbjct: 221 ICHTSGTTGRPKGVEMSH 238
>AL033514-34|CAA22113.1| 463|Caenorhabditis elegans Hypothetical
protein Y75B8A.35b protein.
Length = 463
Score = 27.9 bits (59), Expect = 5.9
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = +2
Query: 188 SVSSVSTLNNGSSPILQLSTLVGMRREYIQPTRPTHASTASNRRG 322
S SS + S PI T +G PTR STASN+ G
Sbjct: 187 SPSSTPSYCCTSGPISPAYTPIGNNANACAPTRSRRTSTASNKSG 231
>AL033514-33|CAB54500.1| 480|Caenorhabditis elegans Hypothetical
protein Y75B8A.35a protein.
Length = 480
Score = 27.9 bits (59), Expect = 5.9
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = +2
Query: 188 SVSSVSTLNNGSSPILQLSTLVGMRREYIQPTRPTHASTASNRRG 322
S SS + S PI T +G PTR STASN+ G
Sbjct: 204 SPSSTPSYCCTSGPISPAYTPIGNNANACAPTRSRRTSTASNKSG 248
>AF160493-1|AAD43348.1| 465|Caenorhabditis elegans DNA-binding
protein ZIP-1 protein.
Length = 465
Score = 27.9 bits (59), Expect = 5.9
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = +2
Query: 188 SVSSVSTLNNGSSPILQLSTLVGMRREYIQPTRPTHASTASNRRG 322
S SS + S PI T +G PTR STASN+ G
Sbjct: 204 SPSSTPSYCCTSGPISPAYTPIGNNANACAPTRSRRTSTASNKSG 248
>AF160492-1|AAD43347.1| 463|Caenorhabditis elegans DNA-binding
protein ZIP-1 protein.
Length = 463
Score = 27.9 bits (59), Expect = 5.9
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = +2
Query: 188 SVSSVSTLNNGSSPILQLSTLVGMRREYIQPTRPTHASTASNRRG 322
S SS + S PI T +G PTR STASN+ G
Sbjct: 187 SPSSTPSYCCTSGPISPAYTPIGNNANACAPTRSRRTSTASNKSG 231
>Z70206-2|CAA94126.2| 771|Caenorhabditis elegans Hypothetical
protein C49F8.2 protein.
Length = 771
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +2
Query: 188 SVSSVSTLNNGSSPILQLSTLVGMRREYIQPTRPTHASTASNRRGLTSVP 337
S+ +++ LNN S I + R+ +PTR + N+ ++S+P
Sbjct: 297 SLPNLNILNNHSGSIQSICDAAKAERKSDKPTRSKSVALFDNKHQMSSIP 346
>L16559-10|AAA27927.1| 371|Caenorhabditis elegans Hypothetical
protein C06E1.11 protein.
Length = 371
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2
Query: 295 MRRPSWLYIFPPHTHQRG 242
+R PSW FP H HQ+G
Sbjct: 5 IRSPSWKSGFPSHQHQQG 22
>AF098997-10|AAC68712.2| 325|Caenorhabditis elegans Serpentine
receptor, class i protein43 protein.
Length = 325
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -2
Query: 526 RQYFSEFRSVACLAPSLLSLVAGPNYIFQVWRYQQVLPIARWL 398
+ Y F+ LA +SL+ P Y+FQ Y V P A ++
Sbjct: 42 KYYILAFQVFCMLADFHISLLVQPMYLFQFMTYSCVGPAATYM 84
>AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical
protein H43E16.1 protein.
Length = 1203
Score = 27.5 bits (58), Expect = 7.9
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = +2
Query: 182 IQSVSSVSTLNNGSSPILQLSTLVGMRREYIQPTRPTHASTASNRRGLTSVP 337
I S + S+ GS + T VG QPT PT T G +S+P
Sbjct: 562 IPSTAGSSSQTPGS--MSSTGTTVGQMSSSFQPTAPTSLGTIMTTPGTSSIP 611
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,134,002
Number of Sequences: 27780
Number of extensions: 326700
Number of successful extensions: 968
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 966
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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