Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0679
         (604 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    25   0.37 
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    23   2.0  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   3.5  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    21   6.1  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   6.1  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   8.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.0  

>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 25.4 bits (53), Expect = 0.37
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +3

Query: 93  LSHSKGDNSRNSSCSRIQNDVSWFTNS 173
           +SHS+  N   +S  + +++ SWF NS
Sbjct: 270 MSHSQFGNGLETSWGKSRDESSWFYNS 296


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 132 TMSFYYYLPCCDSIEIFPVN 73
           T  F+++  CCD I +  VN
Sbjct: 72  THIFFFFAICCDFIALIVVN 91


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = +1

Query: 442 HNSSDKNIREYFSKHPSSSPVRHAGAKSPSPQ 537
           +  S    ++  S+HP S   + +   SP PQ
Sbjct: 203 NGKSSAKRKQLVSEHPDSPNSKKSATPSPPPQ 234


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 480 KAPLVQSCKACWS*IPLASRRQL 548
           ++ + Q CKAC    PL S  +L
Sbjct: 29  RSTISQGCKACGYHSPLESNHKL 51


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 180 TTNYCQHGATATQSGLQYE 236
           +TN C++ AT  Q+  QY+
Sbjct: 104 STNPCENQATCVQNKNQYQ 122


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -1

Query: 271 HQLLYHYEMTLCSY 230
           H L+Y  E+ +C+Y
Sbjct: 477 HGLVYDLELNICNY 490


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +2

Query: 5   FVLCFVIFVIQMISIIDHVLFL 70
           F+LC   F    I    H+LFL
Sbjct: 142 FLLCIYYFYCAFIIFTVHLLFL 163


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,790
Number of Sequences: 336
Number of extensions: 2666
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15248386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)