Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0679
(604 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.54
SB_46160| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.72
SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.72
SB_49878| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_48594| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_4966| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_42244| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_35649| Best HMM Match : M (HMM E-Value=6e-09) 29 2.9
SB_33765| Best HMM Match : S-antigen (HMM E-Value=2.3) 29 3.8
SB_53064| Best HMM Match : Hexapep (HMM E-Value=2.7e-07) 28 5.1
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_17419| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 28 5.1
SB_56997| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_33583| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_16776| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_42041| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_13220| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_11770| Best HMM Match : Pollen_allerg_2 (HMM E-Value=3.2) 28 6.7
SB_8817| Best HMM Match : I-set (HMM E-Value=0) 28 6.7
SB_5677| Best HMM Match : fn3 (HMM E-Value=0.0092) 28 6.7
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 31.5 bits (68), Expect = 0.54
Identities = 27/88 (30%), Positives = 42/88 (47%)
Frame = +1
Query: 112 IIVETHRAPEFKMMSAGSQIQMAPQTTVNTGQPLHSQDSNMSTGSSHSDKEVDALTPEKS 291
++ T APE + + +AP+TTV G L S+ S ++ G++ + K + PE S
Sbjct: 2911 VVPGTTLAPE---STVAPETTVAPETTVEPGTTLTSETS-VAPGTTVAPK--STVGPETS 2964
Query: 292 VAMRGSTAASGTVLVAPGGATPTITMPE 375
VA + A TV+ A T PE
Sbjct: 2965 VAPETTDAPETTVVPETTVAPETTMAPE 2992
>SB_46160| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1488
Score = 31.1 bits (67), Expect = 0.72
Identities = 24/88 (27%), Positives = 39/88 (44%)
Frame = +1
Query: 100 TAREIIVETHRAPEFKMMSAGSQIQMAPQTTVNTGQPLHSQDSNMSTGSSHSDKEVDALT 279
TAR+ I A + A ++ +PQ V+ QP+ S S M S + +DA+T
Sbjct: 798 TARQEIQVNRPAAQLAASQAVKEVNFSPQAPVSPSQPVIS-SSEMYIQGSPKQETIDAIT 856
Query: 280 PEKSVAMRGSTAASGTVLVAPGGATPTI 363
E + S +GT + G +P +
Sbjct: 857 FEIPMDPSAS-VVNGTPDLPSGVLSPPV 883
>SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2317
Score = 31.1 bits (67), Expect = 0.72
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = +1
Query: 178 APQTTVN---TGQPLHSQDSNMSTGSSHSDKEVDALTPEKSVAMRGSTAASGTVLVAPGG 348
AP+TT TG P + S+ +TG+ + + + ++ + G+TA GT V+
Sbjct: 5 APETTAKPETTGAPETTSASD-TTGAPETTAVPETIAAPETTTVPGTTAVPGTTAVSETV 63
Query: 349 ATP-TITMPE 375
ATP T PE
Sbjct: 64 ATPETTAAPE 73
>SB_49878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 283
Score = 29.9 bits (64), Expect = 1.7
Identities = 27/75 (36%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Frame = +1
Query: 148 MMSAGSQIQMAPQTTVNTGQPLHSQDSNMSTGSSHSDKEVDALTPEKSVAMRGSTA---A 318
MMS G Q N P HS S MSTG + K + L P SV ST A
Sbjct: 46 MMSTGEQKAKGG----NISSPCHSVPSMMSTGEQKA-KGGNILCPGHSVPSMMSTGEQKA 100
Query: 319 SGTVLVAPGGATPTI 363
G + PG + P+I
Sbjct: 101 KGGNISCPGHSVPSI 115
>SB_48594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 439
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -3
Query: 593 SAPGNSDEGDGGYIG*LAP*GEGDLAPACL 504
+APG D+ G I AP G GD AP C+
Sbjct: 194 TAPGGIDDAAPGGIDDAAPGGIGDAAPGCI 223
Score = 28.7 bits (61), Expect = 3.8
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Frame = -3
Query: 593 SAPGNSDEGDGGYIG*LAP*GEGDLAPACLTGLDEG-----CFEKYSRIFLSDELWRC 435
+APG+ D+ G IG AP + D AP C+ G E +S+I S L RC
Sbjct: 378 AAPGDMDDAALGGIGDAAPGCKDDAAPGCIDDAVAGGKTMLLLESFSKINHSSRL-RC 434
>SB_4966| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1044
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +1
Query: 244 SSHSDKEVDALTPEKSVAMRGSTAASGTVLVAPGGAT 354
S+ S A K+ A G+TAA G VAPGG T
Sbjct: 683 STGSPAPTSAPGANKTTAAGGTTAAPGGTTVAPGGTT 719
>SB_42244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 870
Score = 29.1 bits (62), Expect = 2.9
Identities = 23/70 (32%), Positives = 28/70 (40%), Gaps = 3/70 (4%)
Frame = +1
Query: 157 AGSQI--QMAPQTTVNTGQ-PLHSQDSNMSTGSSHSDKEVDALTPEKSVAMRGSTAASGT 327
AGSQ Q+AP TT T Q P D + E A TP + TA
Sbjct: 592 AGSQSNDQVAPSTTPTTTQEPPKPADPSAPVTVKKEQGESAAATPTPTTTTVAPTATDKP 651
Query: 328 VLVAPGGATP 357
+ P GA+P
Sbjct: 652 AVSLPDGASP 661
>SB_35649| Best HMM Match : M (HMM E-Value=6e-09)
Length = 1279
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +2
Query: 383 ENEKEMKELVVVGVEEESNAITRQIKIYENISQST 487
E E+E EL + G EEE + + IKI E+ Q+T
Sbjct: 289 EREREELELKLRGSEEEDSTVQGMIKIIEDKLQAT 323
>SB_33765| Best HMM Match : S-antigen (HMM E-Value=2.3)
Length = 200
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +1
Query: 214 HSQDSNMSTGSSHS-DKEVDALTPEKSVAMRGSTAASGTVLVAPGGATPT 360
+ +DS + G + + DK +DA TP+ A+S T L G A+ T
Sbjct: 75 NQEDSTLRGGENGAGDKSIDATTPQDQEEHDHQPASSPTTLEGSGNASDT 124
>SB_53064| Best HMM Match : Hexapep (HMM E-Value=2.7e-07)
Length = 585
Score = 28.3 bits (60), Expect = 5.1
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = +1
Query: 175 MAPQTTVNTGQPLHSQDSNMSTGSSHSDKEVDALTPEKSVAMRGSTAASGTVLVAPGGAT 354
+AP+ TV G S+ + +++G++ K +TP + + STAA GT + G T
Sbjct: 261 LAPEITVAPGTTKASERT-ITSGNTLGSKST--ITPGTTESPE-STAAPGTTVSREGTNT 316
Query: 355 PTITMPE 375
P +PE
Sbjct: 317 PDSLLPE 323
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 28.3 bits (60), Expect = 5.1
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 211 LHSQDSNMSTGSSHSDKEVDALTPEKSVAMRGSTAA-SGTVLVAPGGATPTITMPE 375
+++ +S+M+T +S S+ +A A G+TA +GT A GG TP + P+
Sbjct: 295 IYTGNSSMATATSTSNAAGNATAGASGTAGGGATAGGNGT---AGGGGTPNVLKPK 347
>SB_17419| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 679
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +1
Query: 172 QMAPQTTVNTGQP-LHSQDSNMSTGSSHSDKEVDALTPEKSVAMRGSTAASGT 327
++ P+ N +P + DSNMST S S +D++ P+ G +A GT
Sbjct: 128 RLTPRDVGNISRPGIKRHDSNMSTTSICSTDSIDSMRPQYDGPDCGVSAWWGT 180
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 28.3 bits (60), Expect = 5.1
Identities = 26/88 (29%), Positives = 33/88 (37%), Gaps = 3/88 (3%)
Frame = +1
Query: 121 ETHRAPEFKMMSAGSQIQMAPQTT---VNTGQPLHSQDSNMSTGSSHSDKEVDALTPEKS 291
ET APE SA M PQTT T P + + + + PE +
Sbjct: 2947 ETTAAPE---TSAAPDTTMVPQTTSAPATTMAPETTLAPETTLAPETTMAPETTMAPETT 3003
Query: 292 VAMRGSTAASGTVLVAPGGATPTITMPE 375
VA + AA TV A T +PE
Sbjct: 3004 VAAETTAAAQTTVAAETTAAPETTIVPE 3031
>SB_56997| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 675
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 277 TPEKSVAMRGSTAASGTVLVAPGGATPTI 363
TP + V + GST +G L+ G TP I
Sbjct: 529 TPTRPVTLTGSTTPTGNRLITLSGVTPGI 557
>SB_33583| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 27.9 bits (59), Expect = 6.7
Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Frame = +1
Query: 127 HRAPEFKMMSAGSQIQMAPQTTVNT---GQPLHSQDSNMSTGSSHSDKEVDALTPEKSVA 297
HR P++ M++ +AP+ VN L Q S S + + L P ++
Sbjct: 2 HRNPQWFMVNVEGLYILAPKRRVNVWVRRSSLTDQISERFVAGSKELEPIKRLHPSGNIV 61
Query: 298 MRGSTAASGT 327
RG + SGT
Sbjct: 62 SRGYSLRSGT 71
>SB_16776| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1306
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +2
Query: 368 CRRGSENEKEMKELVVVGVEEESNAITRQIKIYENISQS 484
C GS E+ +++ ++VGVE+E+ + QIK ++Q+
Sbjct: 116 CSYGSLREELIRDRIIVGVEDETLSDRLQIKSDLTLTQA 154
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 27.9 bits (59), Expect = 6.7
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Frame = +1
Query: 121 ETHRAPEFKMMSAGSQIQMAPQTTV---NTGQPLHSQDSNMSTGSSHSDKEVDALTPEKS 291
ET APE ++ + AP+TT T P + + +TG+ + + + ++
Sbjct: 1921 ETTSAPE---TTSVPETTSAPETTALPETTASPETTAKPD-TTGAPETTFVPETIAAPET 1976
Query: 292 VAMRGSTAASGTVLVAPGGATP-TITMPE 375
+ G+TA GT V+ ATP T PE
Sbjct: 1977 TTVPGTTAVPGTTAVSETVATPETTAAPE 2005
>SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3297
Score = 27.9 bits (59), Expect = 6.7
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Frame = +1
Query: 121 ETHRAPEFKMMSAGSQIQMAPQTTV---NTGQPLHSQDSNMSTGSSHSDKEVDALTPEKS 291
ET APE ++ + AP+TT T P + + +TG+ + + + ++
Sbjct: 3076 ETTSAPE---TTSVPETTSAPETTALPETTASPETTAKPD-TTGAPETTFVPETIAAPET 3131
Query: 292 VAMRGSTAASGTVLVAPGGATP-TITMPE 375
+ G+TA GT V+ ATP T PE
Sbjct: 3132 TTVPGTTAVPGTTAVSETVATPETTAAPE 3160
>SB_42041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -1
Query: 70 QKENVINNTDHLNNKYNKAKNK 5
+ +++ N DHLNNK++ KNK
Sbjct: 260 EPDHLNNKPDHLNNKHDHLKNK 281
>SB_13220| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 82
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -3
Query: 356 GVAPPGATRTVPDAAVEPRIAT 291
G A PG T TVP A+ P+ AT
Sbjct: 25 GAAQPGRTMTVPKTAMAPKPAT 46
>SB_11770| Best HMM Match : Pollen_allerg_2 (HMM E-Value=3.2)
Length = 145
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 448 SSDKNIREYFSKHPSSSPVRHAGAKSPSPQGAN 546
SS ++ Y + +PS PV A +SPSP+ N
Sbjct: 14 SSVASLPVYTASYPSPPPVAMASPRSPSPRTPN 46
>SB_8817| Best HMM Match : I-set (HMM E-Value=0)
Length = 2526
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +1
Query: 256 DKEVDALTPEKSVAMRGSTAASGTVLVAPG-GATPTITMPE 375
DKE + LT E S+A R A + APG PT+T E
Sbjct: 1596 DKERERLTSEASIAGRKPFGAVDMSITAPGEDKKPTVTEAE 1636
>SB_5677| Best HMM Match : fn3 (HMM E-Value=0.0092)
Length = 1146
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 457 KNIREYFSKHPSSSPVRHAGAKSPSPQGANYP 552
KN + S+H SS +RH G+ PS +YP
Sbjct: 275 KNKEKTLSRHQSS--LRHPGSSKPSTSSKHYP 304
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,663,498
Number of Sequences: 59808
Number of extensions: 335169
Number of successful extensions: 1150
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1142
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1463691625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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