Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0679
(604 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77661-11|CAB01190.2| 1099|Caenorhabditis elegans Hypothetical p... 33 0.16
Z75543-9|CAA99869.1| 194|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z73970-3|CAA98242.2| 773|Caenorhabditis elegans Hypothetical pr... 28 5.9
AF047652-5|AAC04391.2| 449|Caenorhabditis elegans Hypothetical ... 28 5.9
Z82260-14|CAB05142.2| 521|Caenorhabditis elegans Hypothetical p... 27 7.8
Z73104-10|CAA97437.2| 521|Caenorhabditis elegans Hypothetical p... 27 7.8
Z66500-14|CAA91313.2| 1169|Caenorhabditis elegans Hypothetical p... 27 7.8
Z49968-13|CAA90265.2| 1169|Caenorhabditis elegans Hypothetical p... 27 7.8
AF002198-11|AAF99930.2| 311|Caenorhabditis elegans Hypothetical... 27 7.8
>Z77661-11|CAB01190.2| 1099|Caenorhabditis elegans Hypothetical
protein F40G12.3 protein.
Length = 1099
Score = 33.1 bits (72), Expect = 0.16
Identities = 17/69 (24%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +1
Query: 124 THRAPEFKMMSAGSQI-QMAPQTTVNTGQPLHSQDSNMSTGSSHSDKEVDALTPEKSVAM 300
T + P F +A S + +++P+TTVNTG+ ++ ++ ++G + + V + +V +
Sbjct: 938 TSQIPAFGTKTANSSVAELSPRTTVNTGESATTKATSPTSGGNTTTISVQSANATVAVTL 997
Query: 301 RGSTAASGT 327
+T T
Sbjct: 998 TTNTTTQTT 1006
>Z75543-9|CAA99869.1| 194|Caenorhabditis elegans Hypothetical
protein K01D12.10 protein.
Length = 194
Score = 27.9 bits (59), Expect = 5.9
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = +2
Query: 389 EKEMKELVVVGVEEESNAITRQIKIYENISQSTPRPVL--*GMLELNPPR 532
E E++E+VVVG+E ++ R+ +I + R ++ +LELN PR
Sbjct: 132 EVEVEEMVVVGLETGNSLERRRRRIQSATNMRMDRKMMEQHSILELNTPR 181
>Z73970-3|CAA98242.2| 773|Caenorhabditis elegans Hypothetical
protein C29A12.3a protein.
Length = 773
Score = 27.9 bits (59), Expect = 5.9
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +2
Query: 383 ENEKEMKELVVVGVEEESNAITRQIKIYENISQSTPRPVL*GMLELNPPRLKAPI 547
E E E +EL + V E S+ ++ + E I + TP+ V E PP +P+
Sbjct: 641 EKEDEEEELNMTNVSEGSS---KENPVKEEIKKETPKSVSPKKFEKKPPVKSSPV 692
>AF047652-5|AAC04391.2| 449|Caenorhabditis elegans Hypothetical
protein C34H4.2 protein.
Length = 449
Score = 27.9 bits (59), Expect = 5.9
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +1
Query: 187 TTVNTGQPLHSQDSNMSTGSSHSDKEVDALTPEKSVAMRGSTAASGTV 330
TT ++ P S TG+S S A P S+ + ST SGT+
Sbjct: 374 TTPSSAPPAPGSSSASPTGTSGSSVSPPASGPTTSMPAQASTTPSGTM 421
>Z82260-14|CAB05142.2| 521|Caenorhabditis elegans Hypothetical
protein C32H11.1 protein.
Length = 521
Score = 27.5 bits (58), Expect = 7.8
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 279 SGEVCSYARLNCCVRHSPGCSWWCHTY 359
+G++ Y LNC V + GCS H+Y
Sbjct: 240 AGDIEQYTGLNCPVDRTRGCSIILHSY 266
>Z73104-10|CAA97437.2| 521|Caenorhabditis elegans Hypothetical
protein C32H11.1 protein.
Length = 521
Score = 27.5 bits (58), Expect = 7.8
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 279 SGEVCSYARLNCCVRHSPGCSWWCHTY 359
+G++ Y LNC V + GCS H+Y
Sbjct: 240 AGDIEQYTGLNCPVDRTRGCSIILHSY 266
>Z66500-14|CAA91313.2| 1169|Caenorhabditis elegans Hypothetical
protein T05C12.10 protein.
Length = 1169
Score = 27.5 bits (58), Expect = 7.8
Identities = 19/77 (24%), Positives = 28/77 (36%)
Frame = +1
Query: 118 VETHRAPEFKMMSAGSQIQMAPQTTVNTGQPLHSQDSNMSTGSSHSDKEVDALTPEKSVA 297
V+T + ++G + A TVN G P+ + +TGS S S A
Sbjct: 842 VQTGAKHNAESSASGIPLVQARSNTVNGGAPVPPAPGSGATGSGTSGSGTSESVTNGSGA 901
Query: 298 MRGSTAASGTVLVAPGG 348
+ SGT G
Sbjct: 902 TESGSTGSGTTGTGTSG 918
>Z49968-13|CAA90265.2| 1169|Caenorhabditis elegans Hypothetical
protein T05C12.10 protein.
Length = 1169
Score = 27.5 bits (58), Expect = 7.8
Identities = 19/77 (24%), Positives = 28/77 (36%)
Frame = +1
Query: 118 VETHRAPEFKMMSAGSQIQMAPQTTVNTGQPLHSQDSNMSTGSSHSDKEVDALTPEKSVA 297
V+T + ++G + A TVN G P+ + +TGS S S A
Sbjct: 842 VQTGAKHNAESSASGIPLVQARSNTVNGGAPVPPAPGSGATGSGTSGSGTSESVTNGSGA 901
Query: 298 MRGSTAASGTVLVAPGG 348
+ SGT G
Sbjct: 902 TESGSTGSGTTGTGTSG 918
>AF002198-11|AAF99930.2| 311|Caenorhabditis elegans Hypothetical
protein F35F10.1 protein.
Length = 311
Score = 27.5 bits (58), Expect = 7.8
Identities = 18/62 (29%), Positives = 26/62 (41%)
Frame = +1
Query: 175 MAPQTTVNTGQPLHSQDSNMSTGSSHSDKEVDALTPEKSVAMRGSTAASGTVLVAPGGAT 354
M+ Q N S + + SH K + +T A G+ S T+LVA G T
Sbjct: 1 MSSQNPTNAQYSALSLGGPLGSPPSHPGKSIAKIT----TAFIGALVVSATILVALSGTT 56
Query: 355 PT 360
P+
Sbjct: 57 PS 58
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,033,467
Number of Sequences: 27780
Number of extensions: 248362
Number of successful extensions: 830
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 828
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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