Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0678
         (557 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    25   0.44 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   1.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   1.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   1.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   1.8  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   2.4  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   2.4  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   4.1  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   5.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.2  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    21   7.2  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    21   7.2  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   7.2  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   7.2  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   7.2  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   7.2  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    21   7.2  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    21   9.5  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   9.5  

>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 25.0 bits (52), Expect = 0.44
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = -2

Query: 307 YPKAPAPLACTTRSGIRSLSKDDISSRKLTSCNKAGPFLPTV 182
           YP+  A +    RS  R+L +DD    +  +  K G     V
Sbjct: 157 YPRVSAQMKADLRSHFRALCQDDTPMVRRAAATKLGELAQVV 198


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = -2

Query: 406 PTVENLTAIGVLLPMDSNTLAALYLVMS*VTSKY 305
           P +  +   G    MDSN + A+Y+++  + + Y
Sbjct: 356 PDISEIIPTGDDTTMDSNDMTAIYVLLINIFASY 389


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = -2

Query: 406 PTVENLTAIGVLLPMDSNTLAALYLVMS*VTSKY 305
           P +  +   G    MDSN + A+Y+++  + + Y
Sbjct: 356 PDISEIIPTGDDTTMDSNDMTAIYVLLINIFASY 389


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = -2

Query: 406 PTVENLTAIGVLLPMDSNTLAALYLVMS*VTSKY 305
           P +  +   G    MDSN + A+Y+++  + + Y
Sbjct: 356 PDISEIIPTGDDTTMDSNDMTAIYVLLINIFASY 389


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = -2

Query: 406 PTVENLTAIGVLLPMDSNTLAALYLVMS*VTSKY 305
           P +  +   G    MDSN + A+Y+++  + + Y
Sbjct: 356 PDISEIIPTGDDTTMDSNDMTAIYVLLINIFASY 389


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +1

Query: 187 WARMVQPYYRMLTFLMKCHPLTGSVFQNEW 276
           W R  Q YY  + F+ +C    G+ F+ +W
Sbjct: 205 WQRGSQ-YYDGVPFVTQCPIQQGNTFRYQW 233


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +1

Query: 187 WARMVQPYYRMLTFLMKCHPLTGSVFQNEW 276
           W R  Q YY  + F+ +C    G+ F+ +W
Sbjct: 205 WQRGSQ-YYDGVPFVTQCPIQQGNTFRYQW 233


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -1

Query: 464  ELYSKTSRFTNSISRSTLSTNC*ESNSNRCP 372
            +L  KT   TN+ + S  S +   +N+N  P
Sbjct: 996  KLCDKTETHTNNRTHSATSNSSVNANTNNIP 1026


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 10/33 (30%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +3

Query: 72  RDPATDQLINYKKTLKDSPGFIT-TKSGAPVGI 167
           + P++ ++ +   T   SPGF+T TK+   V +
Sbjct: 65  KSPSSPRISSPSSTKSGSPGFLTYTKADRDVDL 97


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +3

Query: 279  HAKGAGAFGYFEVTHDI 329
            + + AG   Y+E+ H+I
Sbjct: 1670 YTRAAGFLAYYEICHNI 1686


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 24  KQRTPHSKKGTYKMASRDPATDQL 95
           +Q+ PH  KG   +   DP + QL
Sbjct: 318 EQQVPHIVKGNQWLGFDDPKSIQL 341


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 24  KQRTPHSKKGTYKMASRDPATDQL 95
           +Q+ PH  KG   +   DP + QL
Sbjct: 318 EQQVPHIVKGNQWLGFDDPKSIQL 341


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = -1

Query: 272 SFWNTLPVK 246
           SFW++LP+K
Sbjct: 525 SFWDSLPIK 533


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = -1

Query: 272 SFWNTLPVK 246
           SFW++LP+K
Sbjct: 525 SFWDSLPIK 533


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = -1

Query: 272 SFWNTLPVK 246
           SFW++LP+K
Sbjct: 525 SFWDSLPIK 533


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = -1

Query: 272 SFWNTLPVK 246
           SFW++LP+K
Sbjct: 525 SFWDSLPIK 533


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = -1

Query: 272 SFWNTLPVK 246
           SFW++LP+K
Sbjct: 525 SFWDSLPIK 533


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +2

Query: 164 NQNGDTNGGQEWSS 205
           ++NGD + G EW +
Sbjct: 109 SKNGDDDEGHEWQA 122


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 10/41 (24%), Positives = 21/41 (51%)
 Frame = -2

Query: 289 PLACTTRSGIRSLSKDDISSRKLTSCNKAGPFLPTVCIAVL 167
           PL   + +  ++LS+ D+S   ++S +  G      C++ L
Sbjct: 359 PLTSLSLASAQTLSELDLSWNSISSLSHGGQLARFKCLSWL 399


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,307
Number of Sequences: 336
Number of extensions: 3076
Number of successful extensions: 19
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13681771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)