Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0678
(557 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1479 + 30428488-30428502,30428619-30428715,30429627-304299... 175 1e-44
03_01_0223 - 1766292-1766442,1767621-1767676,1767798-1767891,176... 175 1e-44
02_01_0111 - 825369-825428,825778-826380,826467-827267,827716-82... 171 4e-43
04_04_1155 - 31308704-31309051,31309301-31309451,31309532-313097... 32 0.27
04_04_1157 - 31333870-31334220,31334440-31334590,31334678-313349... 31 0.47
06_03_0970 + 26424209-26424910,26425053-26425109,26425251-264254... 30 1.1
01_05_0653 - 23948911-23948937,23949031-23949141,23949361-239494... 30 1.4
04_04_1158 - 31342934-31343272,31343508-31343658,31343745-313439... 28 4.4
02_04_0496 + 23446039-23446964,23452755-23452845,23452946-234529... 28 4.4
02_03_0141 - 15649188-15649274,15649376-15649421,15650476-156506... 28 4.4
12_02_0674 - 21745321-21746223,21746229-21747608 28 5.8
10_01_0296 + 3069605-3070535,3071127-3071294,3075307-3076454 28 5.8
05_03_0586 + 15782645-15782721,15782781-15783405 28 5.8
04_03_0554 - 17075142-17075159,17075788-17076591,17076619-170767... 28 5.8
02_04_0493 + 23435395-23436003 28 5.8
06_01_0376 + 2709254-2711267,2711311-2711450 27 7.7
01_06_0483 + 29701674-29702180 27 7.7
>06_03_1479 +
30428488-30428502,30428619-30428715,30429627-30429904,
30430256-30431032,30431254-30431343,30431538-30431605,
30431696-30431789,30431902-30431961
Length = 492
Score = 175 bits (427), Expect = 1e-44
Identities = 81/141 (57%), Positives = 104/141 (73%)
Frame = +3
Query: 132 FITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDRERIPERVVHAKGAGAFGYF 311
F TT SGAPV + TVG+ GP LL+D + +++++ FDRERIPERVVHA+GA A G+F
Sbjct: 16 FWTTNSGAPVWNNNSALTVGERGPILLEDYHLIEKLAQFDRERIPERVVHARGASAKGFF 75
Query: 312 EVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSADTVREPRGFAVKFYTDDGVWDL 491
EVTHDI+ + A + G +TP+ VRFSTV E GS +T+R+PRGFAVKFYT +G +DL
Sbjct: 76 EVTHDISHLTCADFLRAPGVQTPVIVRFSTVVHERGSPETLRDPRGFAVKFYTREGNFDL 135
Query: 492 VGNNTPIFFIRDPTLFPSFIH 554
VGNN P+FFIRD FP +H
Sbjct: 136 VGNNMPVFFIRDGMKFPDMVH 156
>03_01_0223 -
1766292-1766442,1767621-1767676,1767798-1767891,
1768004-1768071,1768441-1769585,1770072-1770168,
1770265-1770279
Length = 541
Score = 175 bits (427), Expect = 1e-44
Identities = 80/140 (57%), Positives = 103/140 (73%)
Frame = +3
Query: 138 TTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDRERIPERVVHAKGAGAFGYFEV 317
+T SGAPV TVG GP LL+D + ++++++FDRERIPERVVHA+GA A G+FEV
Sbjct: 18 STNSGAPVWNNNNSLTVGSRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEV 77
Query: 318 THDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSADTVREPRGFAVKFYTDDGVWDLVG 497
THDIT + A + G +TP+ VRFSTV E GS +T+R+PRGFA+KFYT +G WDLVG
Sbjct: 78 THDITHLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAIKFYTREGNWDLVG 137
Query: 498 NNTPIFFIRDPTLFPSFIHT 557
NN P+FFIRD FP +H+
Sbjct: 138 NNFPVFFIRDGMKFPDMVHS 157
>02_01_0111 -
825369-825428,825778-826380,826467-827267,827716-827766
Length = 504
Score = 171 bits (415), Expect = 4e-43
Identities = 79/139 (56%), Positives = 99/139 (71%)
Frame = +3
Query: 138 TTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDRERIPERVVHAKGAGAFGYFEV 317
TT +GAPV TVG GP LL+D + +++++ F RERIPERVVHA+GA A G+FE
Sbjct: 30 TTNAGAPVWNDNEALTVGPRGPILLEDYHLIEKVAHFARERIPERVVHARGASAKGFFEC 89
Query: 318 THDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSADTVREPRGFAVKFYTDDGVWDLVG 497
THD+T + A S G +TP+ VRFSTV E GS +T+R+PRGFAVKFYT +G WDL+G
Sbjct: 90 THDVTDITCADFLRSPGAQTPVIVRFSTVIHERGSPETIRDPRGFAVKFYTREGNWDLLG 149
Query: 498 NNTPIFFIRDPTLFPSFIH 554
NN P+FFIRD FP IH
Sbjct: 150 NNFPVFFIRDGIKFPDVIH 168
>04_04_1155 - 31308704-31309051,31309301-31309451,31309532-31309763,
31309854-31310064,31310304-31310422,31310507-31310581,
31310789-31310990,31311075-31311454,31311569-31311633,
31311735-31311779,31312166-31312231,31312667-31312741,
31313022-31313093,31313659-31313727,31313813-31313884,
31313995-31314066,31314441-31314512,31314597-31314668,
31315091-31315162,31315279-31315474,31316094-31316202
Length = 924
Score = 32.3 bits (70), Expect = 0.27
Identities = 31/114 (27%), Positives = 48/114 (42%), Gaps = 4/114 (3%)
Frame = +3
Query: 207 LLQDVNFLDEMSSFDRERI-PERVVHA--KGAGAFGYFEVTHDITKYSAAKV-FESIGKR 374
+L D N ++S F ++ ++ H K AG FGY + + + KV + G
Sbjct: 725 VLLDANLNPKISDFGLAKLYDDKKTHVSTKVAGTFGYLAPEYAMRGHMTEKVDVFAFG-- 782
Query: 375 TPIAVRFSTVGGESGSADTVREPRGFAVKFYTDDGVWDLVGNNTPIFFIRDPTL 536
V T+ G DT+ E K Y + W+L NN P+ + DP L
Sbjct: 783 ---VVLLETLAGRPNYDDTLEED-----KIYIFEWAWELYENNNPLGIV-DPNL 827
>04_04_1157 - 31333870-31334220,31334440-31334590,31334678-31334909,
31335001-31335211,31335517-31335635,31335720-31335953,
31336000-31336201,31336297-31336676,31336792-31336856,
31337362-31337427,31337883-31337957,31338233-31338304,
31338994-31339062,31339150-31339221,31339325-31339396,
31339791-31339862,31339947-31340018,31340474-31340545,
31340645-31340828,31341474-31341588
Length = 961
Score = 31.5 bits (68), Expect = 0.47
Identities = 31/114 (27%), Positives = 48/114 (42%), Gaps = 4/114 (3%)
Frame = +3
Query: 207 LLQDVNFLDEMSSFDRERI-PERVVHA--KGAGAFGYFEVTHDITKYSAAKV-FESIGKR 374
+L D N ++S F ++ ++ H K AG FGY + + + KV + G
Sbjct: 761 VLIDANLNPKISDFGLAKLYDDKKTHVSTKVAGTFGYLAPEYAMRGHMTEKVDVFAFG-- 818
Query: 375 TPIAVRFSTVGGESGSADTVREPRGFAVKFYTDDGVWDLVGNNTPIFFIRDPTL 536
V T+ G DT+ E K Y + W+L NN P+ + DP L
Sbjct: 819 ---VVLLETLAGRPNYDDTLEED-----KIYIFEWAWELYENNNPLGLV-DPKL 863
>06_03_0970 +
26424209-26424910,26425053-26425109,26425251-26425478,
26425788-26425881,26425955-26426161,26426581-26426711,
26426943-26426992,26427125-26427432,26427548-26427651,
26427810-26428526,26429159-26429338,26429703-26429831
Length = 968
Score = 30.3 bits (65), Expect = 1.1
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +3
Query: 177 IQTVGKNGPALLQDVNFLDEMSSFDRERIPERVVHAKGAGAFGYFEVTHDITKYSAAKVF 356
++ +GK+ AL +D NF + SS D R+ E KG YF + + + A++
Sbjct: 32 MEKLGKDQDAL-EDANFQQKPSSVDLNRLMELANSEKGVSQMQYFVKHWEYKRANTARLL 90
Query: 357 -ESIG 368
E IG
Sbjct: 91 KEQIG 95
>01_05_0653 -
23948911-23948937,23949031-23949141,23949361-23949441,
23949865-23949984,23950088-23950252,23950344-23950493,
23950565-23950674,23951401-23951518,23951597-23951827,
23952345-23952524,23953639-23953908,23954930-23954979,
23955213-23955288,23955396-23955483,23956010-23956101,
23956200-23956529,23957484-23957593,23957810-23957907,
23959538-23959566
Length = 811
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -3
Query: 531 LDLL*RKWEYYFQLNPTLHHQYRTLQQNLEVHEQYQQIHSLH 406
+D+L K + QL H Q + LQQ+ H+Q Q ++ LH
Sbjct: 376 IDMLIAKIAHLQQLQQQGHSQQQQLQQSTISHQQAQSLNQLH 417
>04_04_1158 - 31342934-31343272,31343508-31343658,31343745-31343976,
31344173-31344284,31344572-31344690,31344772-31344936,
31345049-31345247,31345351-31345733,31345838-31345902,
31346003-31346047,31346402-31346467,31346707-31346778,
31346907-31346981,31347086-31347157,31347255-31347326,
31347954-31348022,31348109-31348180,31348280-31348351,
31348756-31348827,31349295-31349366,31349528-31349711,
31350082-31350220
Length = 948
Score = 28.3 bits (60), Expect = 4.4
Identities = 28/113 (24%), Positives = 45/113 (39%), Gaps = 3/113 (2%)
Frame = +3
Query: 207 LLQDVNFLDEMSSFDRERI-PERVVHA--KGAGAFGYFEVTHDITKYSAAKVFESIGKRT 377
+L D N ++S F ++ ++ H K AG FGY + + ++ E +
Sbjct: 752 VLLDANLNPKISDFGLAKLYDDKKTHVSTKVAGTFGYLAPEYAMR----GRMTEKVDVFA 807
Query: 378 PIAVRFSTVGGESGSADTVREPRGFAVKFYTDDGVWDLVGNNTPIFFIRDPTL 536
V + G D + E K Y + WDL NN P+ + DP L
Sbjct: 808 FGVVLLEILAGRPNYDDALEED-----KIYIFEWAWDLYENNNPLGLV-DPKL 854
>02_04_0496 +
23446039-23446964,23452755-23452845,23452946-23452996,
23453080-23453206,23453390-23453425,23453443-23453473,
23453488-23453576,23454341-23454462,23455601-23455778,
23458343-23458470,23458592-23458658,23459167-23459272,
23459365-23459473,23459965-23460084,23460187-23460220,
23460471-23460547,23460640-23460692,23460847-23460898,
23461270-23461767
Length = 964
Score = 28.3 bits (60), Expect = 4.4
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -2
Query: 229 RKLTSCNKAGPFLPTVCIAVLIPTGAPDLVVMKPGES 119
R L SC GP PT C ++I P+L +PG++
Sbjct: 109 RCLLSC--CGPMDPTSCTVLVIDLAYPELWYCRPGDN 143
>02_03_0141 -
15649188-15649274,15649376-15649421,15650476-15650606,
15652168-15652254,15652470-15652538,15652699-15652845,
15652923-15653003,15653122-15653223,15653392-15653429,
15653590-15653692,15653766-15653888,15654872-15654951,
15655356-15655504,15657794-15658010,15658379-15658448,
15659167-15659313,15659430-15659486,15663270-15663436,
15663479-15663569,15664044-15665081,15665580-15665695,
15666104-15667039,15667108-15667170,15667416-15667970,
15668293-15668305
Length = 1570
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = -3
Query: 504 YYFQLNPTLHHQYRTLQQNLEVHEQYQQIHS 412
Y++ +PTL H+YR + +L +EQ QQ+ S
Sbjct: 363 YFYDDDPTLEHRYRRCRPDL--YEQDQQVVS 391
>12_02_0674 - 21745321-21746223,21746229-21747608
Length = 760
Score = 27.9 bits (59), Expect = 5.8
Identities = 30/84 (35%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Frame = -2
Query: 487 SHTPSSV*NFTAKPRGSRTVSADPLSPPTVENLTA--IGVL-LPMDSNTLAALYLVMS*V 317
S TPS+ T+ + S T S PLS T++ T G L P D +S
Sbjct: 589 SSTPSTSPLSTSTSKTSSTPSTSPLSSSTIKIPTTARTGELSTPTDKIPTTTRAGDLSTA 648
Query: 316 TSKYPKAPAPL-ACTTRSGIRSLS 248
TSK P AP TT S I S S
Sbjct: 649 TSKIPTAPGTSELSTTTSKISSTS 672
>10_01_0296 + 3069605-3070535,3071127-3071294,3075307-3076454
Length = 748
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 192 KNGPALLQDVNFLDEMSSFDRERIPERVVHAKGAGAFG 305
KNG ++LQ V+ + S D ++I + H G G FG
Sbjct: 397 KNGGSILQKVDNIMIFSKDDLKKITKNNSHVIGQGGFG 434
>05_03_0586 + 15782645-15782721,15782781-15783405
Length = 233
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = -2
Query: 289 PLACTTRSGIRSLSKDDISSRKLTSCNKAGPFLPTVCIAVLIPTGAPDLV 140
P+ C + + +++ DD + FLPT C ++L+ GAP L+
Sbjct: 143 PIVCCSSACWKAVGHDDQQCGHCPGQRRG--FLPTGCCSLLLSIGAPSLL 190
>04_03_0554 -
17075142-17075159,17075788-17076591,17076619-17076719,
17077095-17077751,17077827-17078768,17078837-17078896,
17079131-17079763,17079886-17079942,17080177-17080702
Length = 1265
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = -3
Query: 504 YYFQLNPTLHHQYRTLQQNLEVHEQYQQI 418
Y++ +P+L H+YR +Q E++EQ Q++
Sbjct: 580 YFYDDDPSLEHRYRRCRQ--ELYEQDQEV 606
>02_04_0493 + 23435395-23436003
Length = 202
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -2
Query: 229 RKLTSCNKAGPFLPTVCIAVLIPTGAPDLVVMKPGESFKVFL 104
R L SC GP PT C ++I P+L +PG++ V L
Sbjct: 111 RCLLSC--CGPMDPTSCTDLVIDLADPELWYCRPGDNHWVKL 150
>06_01_0376 + 2709254-2711267,2711311-2711450
Length = 717
Score = 27.5 bits (58), Expect = 7.7
Identities = 26/79 (32%), Positives = 35/79 (44%)
Frame = -2
Query: 418 PLSPPTVENLTAIGVLLPMDSNTLAALYLVMS*VTSKYPKAPAPLACTTRSGIRSLSKDD 239
PLS P L A LP+ + LAAL L+ S P P P RS SL +
Sbjct: 48 PLSLPAARRLAAAFPPLPLLLSLLAALRLLPS------PPPPRPFDALIRS-YASLPRPS 100
Query: 238 ISSRKLTSCNKAGPFLPTV 182
+++ L AG + P+V
Sbjct: 101 LAAAALAFAASAG-YAPSV 118
>01_06_0483 + 29701674-29702180
Length = 168
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = -2
Query: 91 WSVAGSLDAILYVPFLLCGVRCL--IPRSDPR 2
WSVA L A L + L C +R +PRS PR
Sbjct: 65 WSVAFVLAAFLMLISLFCALRLFESLPRSSPR 96
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,658,168
Number of Sequences: 37544
Number of extensions: 325345
Number of successful extensions: 922
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 921
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1269546012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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