Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0677
         (531 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.           26   0.68 
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   2.1  
AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein...    24   2.8  

>DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.
          Length = 407

 Score = 26.2 bits (55), Expect = 0.68
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +3

Query: 183 PEPVHPQHVPRAPRGRRR 236
           P+P  P  V RAPR  RR
Sbjct: 163 PQPARPYRVRRAPRAERR 180


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 24.6 bits (51), Expect = 2.1
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = +3

Query: 3   SARGSAHLPCRVPVAEHPPGRGARRDRAVPGRTHH 107
           S+   + +   +P  +HPPG G +    +P +  H
Sbjct: 219 SSPSGSRMEYLLPHQQHPPGAGVQGAGPIPSQQKH 253


>AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 459

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +1

Query: 94  VVLIMALFGHCGLMSPFVYYYFVT 165
           V  +MAL  +  L  PF Y+ +VT
Sbjct: 149 VAFVMALERYIALAKPFFYHKYVT 172


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 456,630
Number of Sequences: 2352
Number of extensions: 8324
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49051644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)