Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0675
(585 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC550.10 |meu8||betaine aldehyde dehydrogenase |Schizosaccharo... 88 8e-19
SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|... 87 2e-18
SPAC139.05 |||succinate-semialdehyde dehydrogenase |Schizosaccha... 73 3e-14
SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces pombe... 72 5e-14
SPAC1002.12c |||succinate-semialdehyde dehydrogenase |Schizosacc... 71 9e-14
SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces pomb... 63 3e-11
SPBC24C6.04 |||delta-1-pyrroline-5-carboxylate dehydrogenase|Sch... 48 1e-06
SPBC56F2.06 |mug147||sequence orphan|Schizosaccharomyces pombe|c... 27 1.5
SPCC1281.04 |||pyridoxal reductase |Schizosaccharomyces pombe|ch... 26 3.5
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 26 4.7
SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein Zds1|Sch... 25 6.2
SPBC609.05 |pob3||FACT complex component Pob3|Schizosaccharomyce... 25 8.1
SPAC589.12 ||SPAC688.01|glycosylceramide biosynthesis protein |S... 25 8.1
>SPCC550.10 |meu8||betaine aldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 500
Score = 88.2 bits (209), Expect = 8e-19
Identities = 56/178 (31%), Positives = 92/178 (51%), Gaps = 10/178 (5%)
Frame = +2
Query: 71 NLTPVTLELGGKSPVYVDNTVDIVVTAKRILWGKFINVGQTCIAPDYVLCTKEVQNKFL- 247
N+ P+TLELGGKSP+ + D+ + + F N G+ C A ++ + V ++ L
Sbjct: 264 NIVPLTLELGGKSPLIICEDADLSLAIPSAAFAIFFNQGEACTAASRLIVHESVADEVLG 323
Query: 248 ----EASKKVLKEWYGEDPQKSPDLCRIINNRHFSRLQQLIESSKN---KIAIGGCYDSN 406
EA+K ++ G DPQ + L +++ F ++ I+S+ N K +GG S
Sbjct: 324 GLVSEANKLIIGN--GLDPQVT--LGPVVSKTQFEKIVSYIQSAINEGCKCVVGGLPRSE 379
Query: 407 DR--YIEPTILANVTPADKVMEDEIFGPILPIVCIENAYEAIKFINDREHPLVLYVFS 574
+ +I PT+ NV +K+ +EIFGP+L + EA++ ND E+ L VFS
Sbjct: 380 QKGYFIPPTVFTNVQTHNKIWREEIFGPVLAVKTFHTNEEALELANDSEYGLGSGVFS 437
>SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 503
Score = 87.0 bits (206), Expect = 2e-18
Identities = 64/178 (35%), Positives = 93/178 (52%), Gaps = 9/178 (5%)
Frame = +2
Query: 71 NLTPVTLELGGKSPVYVDNTVDIVVTAKRILWGKFINVGQTCIAPDYVLCTKEVQNKFLE 250
NL VTLELGGKSP V N D+ A +G F N GQ C A V ++V ++F++
Sbjct: 263 NLKKVTLELGGKSPNIVFNDADLDSAAVWTNYGIFYNSGQVCCAGSRVYVQEDVYDEFIK 322
Query: 251 ---ASKKVLK--EWYGEDPQKSPDLCRIINNRHFSRLQQLIESS---KNKIAIGGCYDSN 406
A K LK + + ED + ++ + + R+ IES K+ IGG N
Sbjct: 323 RMVAKAKTLKVGDPFAEDTFQGAQ----VSKQQYERIVSYIESGIAHGAKLEIGGKRHGN 378
Query: 407 DRY-IEPTILANVTPADKVMEDEIFGPILPIVCIENAYEAIKFINDREHPLVLYVFSN 577
Y +EPTIL+NVT V ++EIFGP+L ++ + EAI+ N+ + L V +N
Sbjct: 379 LGYFVEPTILSNVTEDMAVGKEEIFGPVLAVIKFKTIEEAIRRGNNSTYGLAAGVHTN 436
Score = 25.0 bits (52), Expect = 8.1
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 7 DYIFYTGGTNVGRIVYEAATKKS 75
D + +TG T VGR+V AA +
Sbjct: 241 DKVAFTGSTGVGRMVMRAAASSN 263
>SPAC139.05 |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 493
Score = 72.9 bits (171), Expect = 3e-14
Identities = 50/171 (29%), Positives = 87/171 (50%), Gaps = 6/171 (3%)
Frame = +2
Query: 83 VTLELGGKSPVYVDNTVDIVVTAKRILWGKFINVGQTCIAPDYVLCTKEVQNKFL-EASK 259
V++ELGG +P V I + KF + GQ C+ P+ V K V ++F+ + ++
Sbjct: 261 VSMELGGNAPFIVFPDFPIDQAVESFCTIKFNSCGQVCVCPNRVYVHKNVYDEFVSKLTE 320
Query: 260 KVLKEWYGEDPQKSPDLCRIINNRHFSRLQQLIESSKNK---IAIGGCYDSNDR--YIEP 424
KV G+ S + +I+ ++ + IE + +K I +GG S+ + + EP
Sbjct: 321 KVKTIKVGDGFDSSSAVGPLISQDGCKKVSKHIEDAVSKGAKITVGGKEISSSKGYFFEP 380
Query: 425 TILANVTPADKVMEDEIFGPILPIVCIENAYEAIKFINDREHPLVLYVFSN 577
T+L+ VT V +E FGP+ + ++ E I++ ND + L YVF+N
Sbjct: 381 TVLSGVTQDMLVASEETFGPLASVFKFDDTEEVIEWANDSDVGLAGYVFTN 431
>SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 72.1 bits (169), Expect = 5e-14
Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 7/175 (4%)
Frame = +2
Query: 71 NLTPVTLELGGKSPVYVDNTVDIVVTAKRILWGKFINVGQTCIAPDYVLCTKEVQNKFLE 250
NL VTLE GGKSP V D+ K G N GQ C + + V +KF+E
Sbjct: 256 NLKAVTLECGGKSPFLVFEDADLDQAVKWAALGIMYNSGQICTSNSRIYVQDSVYDKFIE 315
Query: 251 ASKK-VLKEW-YGEDPQKSPDLCRIINNRHFSRLQQLIESSKN---KIAIGG--CYDSND 409
KK V++++ G + + ++N ++R++ IE K K+ +G
Sbjct: 316 LFKKHVIQDYIVGMPFDDNTVVGPVVNKTQYNRIKNYIEQGKKEGAKLVLGDEPLPLKQG 375
Query: 410 RYIEPTILANVTPADKVMEDEIFGPILPIVCIENAYEAIKFINDREHPLVLYVFS 574
+I PTI A+ + ++++EIFGP++ I + EAI+ N+ + L F+
Sbjct: 376 YFISPTIFADCSENMTIVKEEIFGPVVAISKFKTEDEAIEKANNTTYGLAAMCFT 430
>SPAC1002.12c |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 71.3 bits (167), Expect = 9e-14
Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 6/183 (3%)
Frame = +2
Query: 44 ELFTKPPPRNLTPVTLELGGKSPVYVDNTVDIVVTAKRILWGKFINVGQTCIAPDYVLCT 223
++ K L ++LELGG +P V D+ A ++ KF GQTC+ + +
Sbjct: 253 KILAKQSSSTLKKLSLELGGNAPFIVFEDADLEKAADALMACKFRGSGQTCVCANRIYVH 312
Query: 224 KEVQNKFLE-ASKKVLKEWYGEDPQKSPDLCRIINNRHFSRLQQLIESSKNK---IAIGG 391
V + F++ +++V K G +I+ + S+++Q +E + K + GG
Sbjct: 313 SSVYDAFVDLVTERVSKFKLGYGLDAGVTHGPLISEKAISKVKQHVEDAVQKGGVVVTGG 372
Query: 392 CYDSN--DRYIEPTILANVTPADKVMEDEIFGPILPIVCIENAYEAIKFINDREHPLVLY 565
SN Y EPT++ N + E+E FGP+ + + E + + ND L Y
Sbjct: 373 KVASNLGPMYFEPTVIINAKQGMLISEEETFGPVGALFKFDTEDEVVAWANDSPVGLAGY 432
Query: 566 VFS 574
+FS
Sbjct: 433 LFS 435
>SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 63.3 bits (147), Expect = 3e-11
Identities = 44/177 (24%), Positives = 82/177 (46%), Gaps = 9/177 (5%)
Frame = +2
Query: 68 RNLTPVTLELGGKSPVYVDNTVDIVVTAKRILWGKFINVGQTCIAPDYVLCTKEVQNKFL 247
+ LTP+ LELGGK P + + + ++ G F + GQ CI + ++ V + +
Sbjct: 231 KQLTPLCLELGGKDPCILTDDHRLEEILSIVMRGVFQSAGQNCIGIERIIALDGVYDTII 290
Query: 248 -EASKKVLKEWYGEDPQKSPDLCRIINNRHFSRLQQLIESSKNK---IAIGGCYDSNDRY 415
+ ++ G Q D+ +++N F L+ LI+ + +K + GG + +Y
Sbjct: 291 TKLYNRISTMRLGMYTQNDVDMGAMVSNNRFDHLESLIQDAVSKGARLVYGGHRFQHPKY 350
Query: 416 IE-----PTILANVTPADKVMEDEIFGPILPIVCIENAYEAIKFINDREHPLVLYVF 571
+ PT+L + T K+ ++E F PI + ++ A++ N E L VF
Sbjct: 351 PKGNYFLPTLLVDATNEMKIAQEECFAPIALVFRAKSPEHALEIANGTEFGLGASVF 407
>SPBC24C6.04 |||delta-1-pyrroline-5-carboxylate
dehydrogenase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 47.6 bits (108), Expect = 1e-06
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 8/156 (5%)
Frame = +2
Query: 68 RNLTPVTLELGGKSPVYVDNTVDIVVTAKRILWGKFINVGQTCIAPDYVLCTKEV-QNKF 244
R + E GGK+ V ++ +I + F GQ C A + +K +N F
Sbjct: 290 RTYPKIVGETGGKNFHLVHSSAEIKSAVVNAVRAAFEYQGQKCSALSRLYVSKYAWENGF 349
Query: 245 LEASKKVLKEWYGEDPQK--SPDLCRIINNRHFSRLQQLIES----SKNKIAIGG-CYDS 403
+ K +K P + + +I+ F++L++++ES S+ ++ GG DS
Sbjct: 350 RDELTKQVKSLKVGAPLTDFANFVGPVIHQASFNKLKKVLESAASDSEIEVLAGGKADDS 409
Query: 404 NDRYIEPTILANVTPADKVMEDEIFGPILPIVCIEN 511
++EPT+L + P + +E+FGP+L + E+
Sbjct: 410 EGFFVEPTVLLSKNPKHDIFVNELFGPVLSVYVYED 445
>SPBC56F2.06 |mug147||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 411
Score = 27.5 bits (58), Expect = 1.5
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 421 AHNIGQRHAGRQSDGRRDIRSHLTNSLY 504
AH+I + G+ + + + SHLTN LY
Sbjct: 61 AHSISKPFDGQNDEEKPSLYSHLTNELY 88
>SPCC1281.04 |||pyridoxal reductase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 333
Score = 26.2 bits (55), Expect = 3.5
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -2
Query: 311 IDRGISVGPLRTIPSGLSWRPPET 240
I G VGP+ GL+WRP +T
Sbjct: 3 IVNGFKVGPIGLGLMGLTWRPKQT 26
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 25.8 bits (54), Expect = 4.7
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -1
Query: 477 NISSSITLSAGVTLANIVGSIYLSLES*QPPMAILFLLDSISCCR 343
N SSS+ A TL ++V +LSL + IL LD+ S C+
Sbjct: 88 NCSSSLLSFASSTLDSLVRLDFLSLLPVEISFRILSFLDARSLCQ 132
>SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein
Zds1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 938
Score = 25.4 bits (53), Expect = 6.2
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +1
Query: 208 LRTVHEGGTEQVSGGLQESPEGMVRRGPTEIPRSMPYHK*QALQPSAAADRIEQEQN 378
+RT+H G T +SG S + + PT+ + P HK ++P +A + +E + +
Sbjct: 322 IRTIHRGKTSTLSGNRSHS----ILQKPTD---TSPLHK---IEPISADELVESDDS 368
>SPBC609.05 |pob3||FACT complex component Pob3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 512
Score = 25.0 bits (52), Expect = 8.1
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -2
Query: 290 GPLRTIPSGLSWRPP 246
G LR PSGL W+ P
Sbjct: 20 GKLRIAPSGLGWKSP 34
>SPAC589.12 ||SPAC688.01|glycosylceramide biosynthesis protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 971
Score = 25.0 bits (52), Expect = 8.1
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Frame = -3
Query: 193 SLAHV----YKFTPENSFCRHNYVHRVIYVNWAFAA 98
SLAHV Y+F P R + +I++ W AA
Sbjct: 600 SLAHVWVVAYEFVPGGPILRERTSYILIFIGWNLAA 635
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,632,871
Number of Sequences: 5004
Number of extensions: 59901
Number of successful extensions: 162
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 157
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 252150250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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