Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0675
(585 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42352| Best HMM Match : No HMM Matches (HMM E-Value=.) 214 5e-56
SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 7e-16
SB_57708| Best HMM Match : Aldedh (HMM E-Value=0) 71 7e-13
SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 2e-12
SB_12802| Best HMM Match : Aldedh (HMM E-Value=0) 66 2e-11
SB_58786| Best HMM Match : Aldedh (HMM E-Value=0) 65 5e-11
SB_20180| Best HMM Match : Aldedh (HMM E-Value=5.3e-08) 51 6e-07
SB_6771| Best HMM Match : Aldedh (HMM E-Value=0) 50 2e-06
SB_14803| Best HMM Match : Aldedh (HMM E-Value=4.9e-08) 45 4e-05
SB_32640| Best HMM Match : Aldedh (HMM E-Value=4.9e-08) 45 4e-05
SB_10421| Best HMM Match : Guanylate_cyc (HMM E-Value=0) 43 2e-04
SB_19772| Best HMM Match : Aldedh (HMM E-Value=5.9e-12) 39 0.003
SB_30067| Best HMM Match : Aldedh (HMM E-Value=1.4) 33 0.23
SB_16513| Best HMM Match : Aldedh (HMM E-Value=9.9e-05) 32 0.40
SB_23022| Best HMM Match : CUB (HMM E-Value=0) 31 0.69
SB_14471| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.91
SB_11487| Best HMM Match : Guanylate_cyc (HMM E-Value=2.3e-06) 29 2.8
SB_11808| Best HMM Match : Glycos_transf_1 (HMM E-Value=0.0021) 29 2.8
SB_56456| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_12151| Best HMM Match : AAA_5 (HMM E-Value=0.00042) 28 4.9
SB_43189| Best HMM Match : PGAMP (HMM E-Value=2.1) 28 4.9
SB_33312| Best HMM Match : PALP (HMM E-Value=8.2e-21) 28 4.9
SB_1013| Best HMM Match : Peptidase_M1 (HMM E-Value=0.041) 28 6.4
SB_22072| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_37035| Best HMM Match : Homeobox (HMM E-Value=9.6e-09) 27 8.5
SB_13701| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
SB_8478| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
>SB_42352| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 214 bits (522), Expect = 5e-56
Identities = 96/171 (56%), Positives = 128/171 (74%)
Frame = +2
Query: 68 RNLTPVTLELGGKSPVYVDNTVDIVVTAKRILWGKFINVGQTCIAPDYVLCTKEVQNKFL 247
+NLT VTLELGGKSP Y+D D+ A+RI WGKF N GQTC+APDYVLC +Q+KF+
Sbjct: 170 KNLTRVTLELGGKSPCYIDEDCDMKTVARRICWGKFTNSGQTCVAPDYVLCNPGIQSKFI 229
Query: 248 EASKKVLKEWYGEDPQKSPDLCRIINNRHFSRLQQLIESSKNKIAIGGCYDSNDRYIEPT 427
++ K+ L E+YGEDP S D RI+N++H++RL+ L+ ++ I +GG D +RYI PT
Sbjct: 230 KSMKETLYEFYGEDPHDSADYGRIVNDKHYNRLKALL--TRGTIVLGGDTDDKERYISPT 287
Query: 428 ILANVTPADKVMEDEIFGPILPIVCIENAYEAIKFINDREHPLVLYVFSNQ 580
IL V P+D VME+EIFGPILPIV +++ +AI FINDR+ PL LY+FSN+
Sbjct: 288 ILTGVKPSDPVMENEIFGPILPIVSVDSLDDAIDFINDRDKPLALYIFSNK 338
Score = 30.7 bits (66), Expect = 0.91
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +1
Query: 7 DYIFYTGGTNVGRIVYEAATK 69
D IFYTGG+ VG++V AA K
Sbjct: 150 DKIFYTGGSAVGKLVMAAAAK 170
>SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 826
Score = 81.0 bits (191), Expect = 7e-16
Identities = 55/174 (31%), Positives = 87/174 (50%), Gaps = 6/174 (3%)
Frame = +2
Query: 71 NLTPVTLELGGKSP--VYVDNTVDIVVTAKRILWGKFINVGQTCIAPDYVLCTKEVQNKF 244
NL +TLELGGKSP V+ D+ +D V F N GQ C A + ++F
Sbjct: 570 NLKRLTLELGGKSPNIVFADSDMDYAVEMAH--EALFFNQGQCCSAGSRTFVQDTIYDEF 627
Query: 245 LEASKKVLKEWYGEDPQKSPDLCRIINNRHFSRLQQLIESSKN---KIAIGGCYDSNDR- 412
++ S K K DP S + I+ F ++ LIES K K+ GG N
Sbjct: 628 VKKSVKRAKARTVGDPFDSVEQGPQIDQEQFDKIMDLIESGKKEGAKMQCGGARHGNKGF 687
Query: 413 YIEPTILANVTPADKVMEDEIFGPILPIVCIENAYEAIKFINDREHPLVLYVFS 574
+I+PT+ ++VT ++ ++EIFGP+ ++ ++ E I+ N+ + L VF+
Sbjct: 688 FIQPTVFSDVTDDMRIAKEEIFGPVQQLIKFKSVDEVIERANNTTYGLAAGVFT 741
Score = 27.9 bits (59), Expect = 6.4
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 7 DYIFYTGGTNVGRIVYEAATKKS 75
D + +TG T VGR++ EA+ K +
Sbjct: 548 DKVSFTGSTEVGRLIQEASAKSN 570
>SB_57708| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 528
Score = 70.9 bits (166), Expect = 7e-13
Identities = 49/172 (28%), Positives = 83/172 (48%), Gaps = 8/172 (4%)
Frame = +2
Query: 83 VTLELGGKSPVYVDNTVDIVVTAKRILWGKFINVGQTCIAPDYVLCTK----EVQNKFLE 250
++LELGG +P V N+ +I K L K+ N QTCI + ++ E +F E
Sbjct: 248 MSLELGGNAPFIVFNSANIESAVKGALICKYRNTAQTCICANRIIVQDGIYDEFAKRFAE 307
Query: 251 ASKKVLKEWYGEDPQKSPDLCRIINNRHFSRLQQLIESSKNKIAI----GGCYDSNDRYI 418
A + LK G D + +IN ++++ + + +K A G + + +
Sbjct: 308 AVDQQLKIGNGMDAGTTQG--PLINKMAVEKVERHVADALSKGAKLMRGGHRHPQGENFF 365
Query: 419 EPTILANVTPADKVMEDEIFGPILPIVCIENAYEAIKFINDREHPLVLYVFS 574
EPT+L +V+P V ++E FGP+ P+V + EA+ N + L Y +S
Sbjct: 366 EPTVLTDVSPDMLVCKEETFGPLAPLVRFKTEAEAVAIANSTQSGLAGYFYS 417
>SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1411
Score = 69.7 bits (163), Expect = 2e-12
Identities = 42/157 (26%), Positives = 80/157 (50%), Gaps = 4/157 (2%)
Frame = +2
Query: 83 VTLELGGKSPVYVDNTVDIVVTAKRILWGKFINVGQTCIAPDYVLCTKEVQNKFLEASKK 262
++LELGGKSP V ++ D+ + ++ + N GQ C A +L + + ++ K+
Sbjct: 872 LSLELGGKSPFVVFDSADLDSAVEGVVDAIWFNQGQVCSAGSRLLVQETCAQRMIKKIKE 931
Query: 263 VLKEWYGEDP-QKSPDLCRIINNRHFSRLQQLIESSKNKIA--IGGCYD-SNDRYIEPTI 430
+ DP KS D+ I++ + +++E ++ + A C + Y PT+
Sbjct: 932 RMTHLRLGDPLDKSIDMGAIVDPSQQKSVAKMVEEARAEGAEVYQKCASLPSGCYYPPTL 991
Query: 431 LANVTPADKVMEDEIFGPILPIVCIENAYEAIKFIND 541
+ NV P K++ +E+FGP+L ++ A EA+ N+
Sbjct: 992 ITNVQPVSKIVMEEVFGPVLVVLTFRTAKEAVAIANN 1028
>SB_12802| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 880
Score = 66.1 bits (154), Expect = 2e-11
Identities = 46/175 (26%), Positives = 85/175 (48%), Gaps = 11/175 (6%)
Frame = +2
Query: 83 VTLELGGKSPVYVDNTVDIVVTAKRILWGKFINVGQTCIAPDYVLCTKEVQNKFLEASKK 262
VTLELGGKSP+ + D+ L F++ GQ C V ++++FLE +
Sbjct: 515 VTLELGGKSPLIIFKDADMANAVSGALMANFLSQGQVCSNGTRVFVEDSIKDEFLEKVVE 574
Query: 263 VLKEWYGEDPQKSPD--LCRIINNRHFSRLQQLIESSKN---KIAIGGCY------DSND 409
K DP +PD + +I++ H +++ ++ K+ K+ GG ++
Sbjct: 575 RTKNIRVGDPM-APDTQMGAMISSAHLNKVLDYVQIGKDEGAKVLCGGERLHLPEPLTSG 633
Query: 410 RYIEPTILANVTPADKVMEDEIFGPILPIVCIENAYEAIKFINDREHPLVLYVFS 574
Y+ P ++A T V+++EIFGP++ ++ + EA+ N+ L +F+
Sbjct: 634 YYMSPCVMAECTDDMTVVKEEIFGPVMTVLTFQTEEEAVTRANNTTFGLAGGIFT 688
>SB_58786| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 421
Score = 64.9 bits (151), Expect = 5e-11
Identities = 44/196 (22%), Positives = 84/196 (42%), Gaps = 6/196 (3%)
Frame = +2
Query: 5 RTTSSTLEALTSVELFTKPPPRNLTPVTLELGGKSPVYVDNTVDIVVTAKRILWGKFINV 184
R S T +L+ K + L ++LELGG +P + + ++ ++ KF N
Sbjct: 162 RKLSFTGSTAVGQDLYQKSA-KTLKKLSLELGGNAPFIIFDDANLDKAVSGLINSKFRNA 220
Query: 185 GQTCIAPDYVLCTKEVQNKFLEASKKVLKEW-YGEDPQKSPDLCRIINNRHFSRLQQLIE 361
GQTC+ + V ++ ++F+E V+++ G ++ +IN + LI+
Sbjct: 221 GQTCVCANRVFVDSKIYDQFIEKLIPVVQDLKVGNGLDSGVNIGPLINQAAIDHAKGLID 280
Query: 362 SSKNKIA-----IGGCYDSNDRYIEPTILANVTPADKVMEDEIFGPILPIVCIENAYEAI 526
+ N+ A + N ++ P +L N ++ +EIF P++ + E I
Sbjct: 281 DAINQKAQLLYHLEEDRSLNGNFLNPVVLGNCNSNMRIFNEEIFAPVIAVYKFSTDEEVI 340
Query: 527 KFINDREHPLVLYVFS 574
N L Y +S
Sbjct: 341 NLANKTRFGLASYFYS 356
>SB_20180| Best HMM Match : Aldedh (HMM E-Value=5.3e-08)
Length = 266
Score = 51.2 bits (117), Expect = 6e-07
Identities = 40/177 (22%), Positives = 83/177 (46%), Gaps = 6/177 (3%)
Frame = +2
Query: 62 PPRNLTPVTLELGGKSPVYVDNTVDIVVTAKRILWGKFINVGQTCIAPDYVLCTKEVQNK 241
P +N + L L K+P V DI + + + G GQ C A + +++ +
Sbjct: 4 PKKNRLRLVLGLEAKNPGIVLPDCDIDLAVRECVNGALAFNGQRCTALKILFVHEDIVEE 63
Query: 242 FLEAS-KKVLKEWYGEDPQKSPDLCRIINNRHFSRLQQLIESSKNKIAI-----GGCYDS 403
F + ++V YG + ++ + + +Q+LI+ ++ K A GG +
Sbjct: 64 FNQKFIEQVENLKYGNPWETGVNITPLPEPHKPAYIQELIKDAQEKGAKVINKNGG--ER 121
Query: 404 NDRYIEPTILANVTPADKVMEDEIFGPILPIVCIENAYEAIKFINDREHPLVLYVFS 574
+ ++ P IL V K+ E+E FGP++PI+ ++ E + ++++ + + +FS
Sbjct: 122 QESFVYPAILYPVNSTMKIYEEEQFGPVVPILSFKDIQEPLDYVSESNYGQQVSLFS 178
>SB_6771| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 523
Score = 49.6 bits (113), Expect = 2e-06
Identities = 37/140 (26%), Positives = 63/140 (45%), Gaps = 7/140 (5%)
Frame = +2
Query: 92 ELGGKSPVYVDNTVDIVVTAKRILWGKFINVGQTCIAPDYVLCTKEVQNKFLEASKKVLK 271
E GGK+ +V + D+ V + F GQ C A + K + EA LK
Sbjct: 274 ECGGKNYHFVHMSADLDVVVNSTIRAAFGYQGQKCSACSRLYVPKSRWPEIKEALLAELK 333
Query: 272 EWYGEDPQKSPD--LCRIINNRHFSRLQQLIESSKNK-----IAIGGCYDSNDRYIEPTI 430
P + + +I+ F ++ ++ K+ +A G C S ++EPTI
Sbjct: 334 TAKMGSPVDIDNTFMTAVIDEASFDNIKTYLDFCKSSDEITVLAGGNCDKSVGYFVEPTI 393
Query: 431 LANVTPADKVMEDEIFGPIL 490
+ P +K+M++EIFGP++
Sbjct: 394 VETSNPYNKMMKEEIFGPVV 413
>SB_14803| Best HMM Match : Aldedh (HMM E-Value=4.9e-08)
Length = 195
Score = 45.2 bits (102), Expect = 4e-05
Identities = 36/146 (24%), Positives = 66/146 (45%), Gaps = 10/146 (6%)
Frame = +2
Query: 131 VDIVVTAKRILWGKFINVGQTCIAPDYVLCTKEVQNKFLEASKKVLKEWYGEDPQKSPDL 310
+ V + + ++ F GQ C+A + E + E +K + Q DL
Sbjct: 14 ISFVGSDQALVGAAFGAAGQRCMALSTAIFVGETKEWIPEIVEKAKQLKVSAGDQPGADL 73
Query: 311 CRIINNRHFSRLQQLIESSKNK----------IAIGGCYDSNDRYIEPTILANVTPADKV 460
+I+ + R L++S + I + G Y+ N ++ PT+L+NVTP
Sbjct: 74 GPMISPQAKKRACDLVQSGVEQGASLDLDGRDIVVKG-YE-NGNFVGPTVLSNVTPEMTC 131
Query: 461 MEDEIFGPILPIVCIENAYEAIKFIN 538
++EIFGP+L + + +A++ IN
Sbjct: 132 YKEEIFGPVLVALNADTLEDAVEIIN 157
>SB_32640| Best HMM Match : Aldedh (HMM E-Value=4.9e-08)
Length = 195
Score = 45.2 bits (102), Expect = 4e-05
Identities = 36/146 (24%), Positives = 66/146 (45%), Gaps = 10/146 (6%)
Frame = +2
Query: 131 VDIVVTAKRILWGKFINVGQTCIAPDYVLCTKEVQNKFLEASKKVLKEWYGEDPQKSPDL 310
+ V + + ++ F GQ C+A + E + E +K + Q DL
Sbjct: 14 ISFVGSDQALVGAAFGAAGQRCMALSTAIFVGETKEWIPEIVEKAKQLKVSAGDQPGADL 73
Query: 311 CRIINNRHFSRLQQLIESSKNK----------IAIGGCYDSNDRYIEPTILANVTPADKV 460
+I+ + R L++S + I + G Y+ N ++ PT+L+NVTP
Sbjct: 74 GPMISPQAKKRACDLVQSGVEQGASLDLDGRDIVVKG-YE-NGNFVGPTVLSNVTPEMTC 131
Query: 461 MEDEIFGPILPIVCIENAYEAIKFIN 538
++EIFGP+L + + +A++ IN
Sbjct: 132 YKEEIFGPVLVALNADTLEDAVEIIN 157
>SB_10421| Best HMM Match : Guanylate_cyc (HMM E-Value=0)
Length = 1485
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/59 (38%), Positives = 31/59 (52%)
Frame = +2
Query: 71 NLTPVTLELGGKSPVYVDNTVDIVVTAKRILWGKFINVGQTCIAPDYVLCTKEVQNKFL 247
NL VTLELGGKSP V D+ + G FIN GQ C A + + + ++F+
Sbjct: 1402 NLKRVTLELGGKSPNIVFADADLDWAVEMSCLGLFINQGQCCCAGTRIFVEESIHDEFV 1460
>SB_19772| Best HMM Match : Aldedh (HMM E-Value=5.9e-12)
Length = 211
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/83 (25%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Frame = +2
Query: 320 INNRHFSRLQQLIESSKN---KIAIGGCYDSNDRY-IEPTILANVTPADKVMEDEIFGPI 487
++ +++ LIES + K+ +GG + Y I+PT+ ++V ++ ++EIFGP+
Sbjct: 77 VDGEQMTKILNLIESGRKEGAKLEVGGDRAGDKGYFIQPTVFSDVQDNMRIAQEEIFGPV 136
Query: 488 LPIVCIENAYEAIKFINDREHPL 556
+ I ++ + I+ N + L
Sbjct: 137 MQIFRFKDMNDIIERANKTTYGL 159
>SB_30067| Best HMM Match : Aldedh (HMM E-Value=1.4)
Length = 119
Score = 32.7 bits (71), Expect = 0.23
Identities = 23/115 (20%), Positives = 50/115 (43%), Gaps = 13/115 (11%)
Frame = +2
Query: 173 FINVGQTCIAPDYVLCTKEVQNKFLEAS-KKVLKEWYGEDPQKSPDLCRIINNRHFSRLQ 349
F N G+ C+ + + + + FL+ ++ K G + S + +I+ H +++
Sbjct: 4 FANQGEICLCTSRIFVQRSIYDNFLDMFVQETRKLIVGPPTENSSFMGALISKDHLEKVK 63
Query: 350 QLIESSKNKIAIGGCYDSNDR------------YIEPTILANVTPADKVMEDEIF 478
I +K C +S D ++ PT++ +V + + M++EIF
Sbjct: 64 GYIRIAKEDGGTVLCGESKDPPPDLPKEYKNGYFMRPTVITDVKDSSRCMQEEIF 118
>SB_16513| Best HMM Match : Aldedh (HMM E-Value=9.9e-05)
Length = 301
Score = 31.9 bits (69), Expect = 0.40
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +2
Query: 386 GGCYDSNDRYIEPTILANVTPADKVMEDEIFGPILPIVCIENAYEAIKFIND 541
G + + + EPT+L +V V +E FGP+ P+ + + + F D
Sbjct: 220 GHRHPQGENFFEPTVLTDVNQDTLVCMEETFGPLAPLFSLPDNKQVPTFRQD 271
>SB_23022| Best HMM Match : CUB (HMM E-Value=0)
Length = 1307
Score = 31.1 bits (67), Expect = 0.69
Identities = 13/35 (37%), Positives = 25/35 (71%)
Frame = -1
Query: 480 PNISSSITLSAGVTLANIVGSIYLSLES*QPPMAI 376
P+I +S+ LSA +++++ GS Y S+++ PP A+
Sbjct: 665 PSIQASVPLSAVASISSVQGSDYPSVQASVPPSAV 699
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/35 (34%), Positives = 24/35 (68%)
Frame = -1
Query: 480 PNISSSITLSAGVTLANIVGSIYLSLES*QPPMAI 376
P+I +S+ SA +++++ GS Y S+++ PP A+
Sbjct: 711 PSIQASVPPSAVASVSSVEGSDYPSIQASVPPSAV 745
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/35 (34%), Positives = 24/35 (68%)
Frame = -1
Query: 480 PNISSSITLSAGVTLANIVGSIYLSLES*QPPMAI 376
P+I +S+ SA +++++ GS Y S+++ PP A+
Sbjct: 596 PSIQASVPPSAVASVSSVQGSDYPSVQASVPPSAV 630
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/35 (34%), Positives = 24/35 (68%)
Frame = -1
Query: 480 PNISSSITLSAGVTLANIVGSIYLSLES*QPPMAI 376
P+I +S+ SA +++++ GS Y S+++ PP A+
Sbjct: 734 PSIQASVPPSAVASVSSVQGSDYPSVQASVPPSAV 768
>SB_14471| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 327
Score = 30.7 bits (66), Expect = 0.91
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = -3
Query: 418 YISVVRVVTTTDGYFVLARFYQLLQTAE 335
YI + + T G+F+L +Y++LQTA+
Sbjct: 185 YIIAICIAATIPGFFMLVAYYKILQTAK 212
>SB_11487| Best HMM Match : Guanylate_cyc (HMM E-Value=2.3e-06)
Length = 360
Score = 29.1 bits (62), Expect = 2.8
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = +2
Query: 263 VLKEWYGEDPQKSPDLCRIINNRHFSRLQQLIE 361
++++ + EDP++ P RI+ + R QQ++E
Sbjct: 229 LIRDCWAEDPEERPHFFRIVETQKDRRAQQVVE 261
>SB_11808| Best HMM Match : Glycos_transf_1 (HMM E-Value=0.0021)
Length = 496
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 218 CTKEVQNKFLEASKKVL-KEWYGEDPQKSPDLC 313
C E + +EA KKVL W+GE+ K P +C
Sbjct: 462 CLIEQLPEKVEARKKVLVPTWFGEERHKRPHIC 494
>SB_56456| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1266
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +3
Query: 180 TWAKLALLPTTYCARRRYRTSFWRPPRKS*RNGTERTHRNP 302
T K++ T RR SF+RP R+S R E RNP
Sbjct: 68 TITKMSNRAPTQHRRRSSNESFYRPARESVRRNPEGMSRNP 108
>SB_12151| Best HMM Match : AAA_5 (HMM E-Value=0.00042)
Length = 4607
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1
Query: 318 IRHRSGDFCGSSPYHSFRTFLEASRN 241
+RH S ++ S +H FR +LE S N
Sbjct: 2678 VRHLSTEYFNSPQHHGFRYYLECSLN 2703
>SB_43189| Best HMM Match : PGAMP (HMM E-Value=2.1)
Length = 461
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -3
Query: 205 GSNASLAHVYKFTPENSFCRHNYVHR 128
G+ SLAH+Y+FT RH + HR
Sbjct: 359 GTTPSLAHMYQFTHALRTVRHPHSHR 384
>SB_33312| Best HMM Match : PALP (HMM E-Value=8.2e-21)
Length = 449
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +2
Query: 2 TRTTSSTLEALTSVELFTKPPPRNLTPVTLELGGKSPVYVD 124
T TS L VEL +PP RN+ GG P+Y+D
Sbjct: 98 TLATSIALRVYICVEL--RPPVRNMAIKFESEGGCGPIYID 136
>SB_1013| Best HMM Match : Peptidase_M1 (HMM E-Value=0.041)
Length = 999
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -3
Query: 202 SNASLAHVYKFTPENSFCRHNYVH-RVIYVNWAFAAK 95
S A L V++ EN CR+ Y H + ++V+ A++ K
Sbjct: 162 STAFLHDVFEMYEENLSCRYPYTHYKQVFVDQAYSVK 198
>SB_22072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 642
Score = 27.9 bits (59), Expect = 6.4
Identities = 22/77 (28%), Positives = 35/77 (45%)
Frame = +2
Query: 275 WYGEDPQKSPDLCRIINNRHFSRLQQLIESSKNKIAIGGCYDSNDRYIEPTILANVTPAD 454
W+G++P S D C+I FSRL + KI C ++ ++ L+N+T
Sbjct: 76 WHGKEPVLSVDFCKI---GAFSRLASAGADTDIKIWSVTCSENGSNNLK--FLSNLTRHT 130
Query: 455 KVMEDEIFGPILPIVCI 505
K + F P +V I
Sbjct: 131 KAVNVVRFSPKDSVVFI 147
>SB_37035| Best HMM Match : Homeobox (HMM E-Value=9.6e-09)
Length = 243
Score = 27.5 bits (58), Expect = 8.5
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +2
Query: 242 FLEASKKVLKEWYGEDPQKSP 304
F E ++ +L+EWY +DP +P
Sbjct: 136 FKERTRSLLREWYLQDPYPNP 156
>SB_13701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 476
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -1
Query: 81 GVRFLGGGFVNNSTDVSASSVEDVVLV 1
GV F GGGFVN + V SV+D +L+
Sbjct: 296 GVSFKGGGFVNRTKHV---SVKDEILI 319
>SB_8478| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 4/52 (7%)
Frame = +1
Query: 181 RGPNLHCSRLRTVHEGGTEQVSGGLQESPEGMVRRGPTEIPR----SMPYHK 324
R PN C R R+ + G + LQE +G + P + + S P HK
Sbjct: 751 RPPNKKCDRQRSKEDEGCATMDTTLQEEGQGQRQEAPYNLRKRKRPSSPTHK 802
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,153,454
Number of Sequences: 59808
Number of extensions: 478961
Number of successful extensions: 1235
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1227
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1410146228
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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