Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0674
         (427 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080546-1|AAC29475.1|  432|Anopheles gambiae S-adenosyl-L-homoc...    29   0.052
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    24   2.0  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    22   7.9  

>AF080546-1|AAC29475.1|  432|Anopheles gambiae
           S-adenosyl-L-homocysteine hydrolase protein.
          Length = 432

 Score = 29.5 bits (63), Expect = 0.052
 Identities = 15/59 (25%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
 Frame = +2

Query: 44  LESKKIQVQLDTLHM--GNEMVIIKGGQRVCGSGCALGNTPLLQNKAYFEVKLQQGGVW 214
           +E   I+ Q+D   +  GN ++++  G R+   GCA+G++  + + ++    L Q  +W
Sbjct: 316 VEKVNIKPQVDRYRLANGNHIILLAEG-RLVNLGCAMGHSSFVMSNSFTNQVLAQIELW 373


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 24.2 bits (50), Expect = 2.0
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -3

Query: 179 KLYSVTEGCCQEHSPTH 129
           +LY V  GC QE   TH
Sbjct: 607 ELYDVRSGCVQEQDGTH 623


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 188 LRNKLYSVTEGCCQEHSPTHKP 123
           L  KL+   + CC + SP H P
Sbjct: 33  LCQKLHFRDQVCCVQRSPPHWP 54


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 476,603
Number of Sequences: 2352
Number of extensions: 9791
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 34867302
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)