Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0670
(551 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50795-2|CAA90663.1| 618|Caenorhabditis elegans Hypothetical pr... 195 2e-50
AC006615-4|AAK68233.2| 602|Caenorhabditis elegans Hypothetical ... 182 1e-46
Z66524-5|CAC70104.1| 566|Caenorhabditis elegans Hypothetical pr... 98 3e-21
AC006605-2|AAL00853.1| 139|Caenorhabditis elegans Hypothetical ... 31 0.73
AC024847-6|AAF60855.1| 909|Caenorhabditis elegans Patched relat... 30 1.3
Z82052-6|CAB04829.4| 327|Caenorhabditis elegans Hypothetical pr... 29 1.7
U50311-4|AAA92309.1| 491|Caenorhabditis elegans Serpentine rece... 29 2.9
U50311-3|AAK68203.1| 589|Caenorhabditis elegans Serpentine rece... 29 2.9
U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical pr... 28 5.1
AL137227-10|CAB76717.1| 391|Caenorhabditis elegans Hypothetical... 28 5.1
AL132848-6|CAB76731.1| 391|Caenorhabditis elegans Hypothetical ... 28 5.1
Z99288-6|CAB16549.2| 286|Caenorhabditis elegans Hypothetical pr... 27 6.8
Z19157-1|CAB63418.2| 733|Caenorhabditis elegans Hypothetical pr... 27 6.8
D86922-1|BAA13180.1| 733|Caenorhabditis elegans cyclic nucleoti... 27 6.8
AF047657-4|AAK18948.3| 330|Caenorhabditis elegans Serpentine re... 27 6.8
U40029-5|AAA81125.2| 457|Caenorhabditis elegans Hypothetical pr... 27 9.0
U40029-4|ABD94116.1| 471|Caenorhabditis elegans Hypothetical pr... 27 9.0
>Z50795-2|CAA90663.1| 618|Caenorhabditis elegans Hypothetical
protein R166.2 protein.
Length = 618
Score = 195 bits (476), Expect = 2e-50
Identities = 92/163 (56%), Positives = 126/163 (77%), Gaps = 1/163 (0%)
Frame = +2
Query: 65 NMMRDYVPINKTTEVLNLQLTYQPLSLFKWQLYTAQAMRDKL-SMFSALGAEEQDEDQDT 241
N+ DY PIN+T + LNL +TY P+S+FK+Q+Y +Q M+ + SM S GA+ D+ D+
Sbjct: 260 NLGADYQPINETVKDLNLTITYYPMSVFKYQMYASQRMQSQWQSMLSMDGADMDDDGHDS 319
Query: 242 VKELLLDTSPYLLALTISVSILHSICELLAFKNDIQFWNNRQSLEGLSVRSVFFNVFQST 421
+K+ LL+T+P LLA+T+ VS+LH++ E LAFKNDIQFWNNR+ L GLSVRSV FN+FQS
Sbjct: 320 MKQALLETNPILLAVTMIVSLLHTVFEFLAFKNDIQFWNNRKDLVGLSVRSVLFNIFQSL 379
Query: 422 IVLLYVLDNETNVMVRISCFIGLLIEIWKINKVMDVKINRESR 550
IV LY+ DNETN MV+++ IGLLIE WKI KVM+V I+ +++
Sbjct: 380 IVFLYICDNETNTMVKVTVGIGLLIECWKIPKVMNVSIDWQNK 422
Score = 27.5 bits (58), Expect = 6.8
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 4 IYFLPDGKQYKPAVFLNDYWEYDA 75
I F DG YKP +F N++W A
Sbjct: 240 IEFNEDGTIYKPILFYNNWWNLGA 263
>AC006615-4|AAK68233.2| 602|Caenorhabditis elegans Hypothetical
protein C36B7.6 protein.
Length = 602
Score = 182 bits (444), Expect = 1e-46
Identities = 88/159 (55%), Positives = 117/159 (73%)
Frame = +2
Query: 65 NMMRDYVPINKTTEVLNLQLTYQPLSLFKWQLYTAQAMRDKLSMFSALGAEEQDEDQDTV 244
N+ DY+PIN+T + L L +T+ PLS+FK+Q+Y +Q MR + S + + ED D+V
Sbjct: 260 NLGADYMPINETVKELKLSVTFYPLSIFKYQMYASQNMRSQWSDY----LHTEKEDDDSV 315
Query: 245 KELLLDTSPYLLALTISVSILHSICELLAFKNDIQFWNNRQSLEGLSVRSVFFNVFQSTI 424
K LL+T+P LL +TI+VS+LH++ E LAFKNDIQFW +R+ L GLSVRSV FN+FQS I
Sbjct: 316 KVALLETNPILLGVTIAVSLLHTVLEFLAFKNDIQFWRSRKDLVGLSVRSVLFNIFQSLI 375
Query: 425 VLLYVLDNETNVMVRISCFIGLLIEIWKINKVMDVKINR 541
V LY+ DNETN MV+ S GLLIE WKI KVM+V+ +R
Sbjct: 376 VFLYICDNETNFMVKFSVGAGLLIECWKIPKVMNVEFDR 414
Score = 29.9 bits (64), Expect = 1.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 4 IYFLPDGKQYKPAVFLNDYWEYDA 75
+ F P+G+ Y P +F N+YW A
Sbjct: 240 VKFAPNGEFYHPILFFNNYWNLGA 263
>Z66524-5|CAC70104.1| 566|Caenorhabditis elegans Hypothetical
protein T13H5.8 protein.
Length = 566
Score = 98.3 bits (234), Expect = 3e-21
Identities = 52/142 (36%), Positives = 79/142 (55%)
Frame = +2
Query: 110 LNLQLTYQPLSLFKWQLYTAQAMRDKLSMFSALGAEEQDEDQDTVKELLLDTSPYLLALT 289
+NL + Y+P S+ K L T+ A M +D+D D ++ L +TS LL +T
Sbjct: 240 VNLTINYEPTSVAKLLLLTSTARSTHQLMKHGF----KDKDVDELRGLFTETSIVLLMVT 295
Query: 290 ISVSILHSICELLAFKNDIQFWNNRQSLEGLSVRSVFFNVFQSTIVLLYVLDNETNVMVR 469
VS LH + + LAFKNDI FW R+S+ GLS +++ + F TI+ Y+ D +T+++V
Sbjct: 296 FFVSTLHLLFDALAFKNDISFWKGRKSMVGLSTKTLLWRCFSQTIIFFYLFDQQTSLLVL 355
Query: 470 ISCFIGLLIEIWKINKVMDVKI 535
I I +IE WK+ V I
Sbjct: 356 IPAGIATVIEYWKVTIAYKVTI 377
>AC006605-2|AAL00853.1| 139|Caenorhabditis elegans Hypothetical
protein C07H6.9 protein.
Length = 139
Score = 30.7 bits (66), Expect = 0.73
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = -3
Query: 549 RLSLFILTSITLFIFQISINNPMKHDILTIT 457
+ SLF LTSI + I+ IS N + +++TIT
Sbjct: 37 QFSLFFLTSILIVIYFISYNGVQRLNVITIT 67
>AC024847-6|AAF60855.1| 909|Caenorhabditis elegans Patched related
family protein 21 protein.
Length = 909
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +2
Query: 113 NLQLTYQPLSLFKWQLYTAQAMRDKLSMFSALGAEEQDEDQDTVK 247
NL ++ + + YT +RD + F +GAE+ D +++TVK
Sbjct: 561 NLVHDFESMEKCRGSEYTISPIRDYQTYFYGVGAEDFDYEEETVK 605
>Z82052-6|CAB04829.4| 327|Caenorhabditis elegans Hypothetical
protein T25E12.11 protein.
Length = 327
Score = 29.5 bits (63), Expect = 1.7
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Frame = +2
Query: 5 FIFYLMVNNINLLYF*MITGNMMRDYVPIN---KTTEVLNLQLTYQPLSLFKWQLYTAQA 175
FIF+++ I+LL F + N ++ ++PI+ K+ + + +T PL++F L A
Sbjct: 108 FIFHILQQTIHLLLFLLAIINSLKYHLPIHFAFKSQDFIRKYIT--PLNVFFISLDAAAF 165
Query: 176 MRDKLSMFSALGAEE 220
M L + L E+
Sbjct: 166 MLHFLRQYCLLSTEK 180
>U50311-4|AAA92309.1| 491|Caenorhabditis elegans Serpentine
receptor, class sx protein34, isoform a protein.
Length = 491
Score = 28.7 bits (61), Expect = 2.9
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +2
Query: 278 LALTISVSILHSICELLAFKNDIQF-WNNRQSLEGLSVRSVFFNVFQSTIVLLYVLDNET 454
+A++ S S L +I +L + F W+ ++ S+ V F V STI+LLY+ +
Sbjct: 279 MAVSFSHSTLSTIGSILYM---VMFGWDGATTVRVGSITMVIFGVMSSTILLLYIFCHFG 335
Query: 455 NVMVRISCFI 484
++ + F+
Sbjct: 336 KILPQHKVFL 345
>U50311-3|AAK68203.1| 589|Caenorhabditis elegans Serpentine
receptor, class sx protein34, isoform b protein.
Length = 589
Score = 28.7 bits (61), Expect = 2.9
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +2
Query: 278 LALTISVSILHSICELLAFKNDIQF-WNNRQSLEGLSVRSVFFNVFQSTIVLLYVLDNET 454
+A++ S S L +I +L + F W+ ++ S+ V F V STI+LLY+ +
Sbjct: 279 MAVSFSHSTLSTIGSILYM---VMFGWDGATTVRVGSITMVIFGVMSSTILLLYIFCHFG 335
Query: 455 NVMVRISCFI 484
++ + F+
Sbjct: 336 KILPQHKVFL 345
>U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical
protein F21C10.7 protein.
Length = 2541
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = +2
Query: 191 SMFSALGAEEQDEDQDTVKELLLDTSPYLLALTISVSILHSICELLAFKNDIQFW 355
S L E Q+E+Q + +L+D + Y+ +S + LL D+Q W
Sbjct: 646 STLETLKEENQNEEQISRINVLIDKTDYVKTRLDQLSQKVELTSLLKIVEDVQIW 700
>AL137227-10|CAB76717.1| 391|Caenorhabditis elegans Hypothetical
protein F58D5.3 protein.
Length = 391
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +3
Query: 57 LLGI*CVIMYLLIKQQKFLTYN 122
+LG C+++YLLI +QKFL+ N
Sbjct: 15 ILGF-CILIYLLILRQKFLSEN 35
>AL132848-6|CAB76731.1| 391|Caenorhabditis elegans Hypothetical
protein F58D5.3 protein.
Length = 391
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +3
Query: 57 LLGI*CVIMYLLIKQQKFLTYN 122
+LG C+++YLLI +QKFL+ N
Sbjct: 15 ILGF-CILIYLLILRQKFLSEN 35
>Z99288-6|CAB16549.2| 286|Caenorhabditis elegans Hypothetical
protein ZK262.7 protein.
Length = 286
Score = 27.5 bits (58), Expect = 6.8
Identities = 21/71 (29%), Positives = 34/71 (47%)
Frame = +2
Query: 287 TISVSILHSICELLAFKNDIQFWNNRQSLEGLSVRSVFFNVFQSTIVLLYVLDNETNVMV 466
T S+ I SI +L++ NNR L LS + F + V +V D M+
Sbjct: 54 TNSLMIGISIADLISL---FMMINNRAQLYWLSPNTCFNSYTYPLNVARFVQDVSWESMM 110
Query: 467 RISCFIGLLIE 499
R+S ++GL ++
Sbjct: 111 RVSFYLGLCLD 121
>Z19157-1|CAB63418.2| 733|Caenorhabditis elegans Hypothetical
protein ZC84.2 protein.
Length = 733
Score = 27.5 bits (58), Expect = 6.8
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +2
Query: 353 WNNRQSLEGLSVRSVFFNVFQSTIVLLYVLDNETNVMVRISCFIGLLIEI 502
W N+QSL V V + Q+ I + + V + C GLL E+
Sbjct: 456 WTNKQSLSDQQVLKVLPDKLQAEIAMQVHFETLRKVRIFQDCEAGLLAEL 505
>D86922-1|BAA13180.1| 733|Caenorhabditis elegans cyclic
nucleotide-gated channel protein.
Length = 733
Score = 27.5 bits (58), Expect = 6.8
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +2
Query: 353 WNNRQSLEGLSVRSVFFNVFQSTIVLLYVLDNETNVMVRISCFIGLLIEI 502
W N+QSL V V + Q+ I + + V + C GLL E+
Sbjct: 456 WTNKQSLSDQQVLKVLPDKLQAEIAMQVHFETLRKVRIFQDCEAGLLAEL 505
>AF047657-4|AAK18948.3| 330|Caenorhabditis elegans Serpentine
receptor, class h protein240 protein.
Length = 330
Score = 27.5 bits (58), Expect = 6.8
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +2
Query: 344 IQFWNNRQSLEGLSVRSVFFNVFQSTIVLLYVLDNETNVMVRISCFI 484
I FW + Q + +++ V N STI++L+ + I CF+
Sbjct: 262 IFFWYHNQVINNIALLVVSLNGIGSTIIMLFAHKPYRTYTLSIFCFL 308
>U40029-5|AAA81125.2| 457|Caenorhabditis elegans Hypothetical
protein F10G7.5a protein.
Length = 457
Score = 27.1 bits (57), Expect = 9.0
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = +2
Query: 338 NDIQFWNNRQSLEGLS----VRSVFFNVFQSTIVLLYVLDNETNVMVRISCFIGLLIEI 502
ND F+ LE + V S+FF VFQS I L+++ E ++ V IG EI
Sbjct: 181 NDQGFFTQEDLLERVPYVFIVMSIFFTVFQS-IGLIFIGQPEGDIHVETENLIGTNSEI 238
>U40029-4|ABD94116.1| 471|Caenorhabditis elegans Hypothetical
protein F10G7.5b protein.
Length = 471
Score = 27.1 bits (57), Expect = 9.0
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = +2
Query: 338 NDIQFWNNRQSLEGLS----VRSVFFNVFQSTIVLLYVLDNETNVMVRISCFIGLLIEI 502
ND F+ LE + V S+FF VFQS I L+++ E ++ V IG EI
Sbjct: 195 NDQGFFTQEDLLERVPYVFIVMSIFFTVFQS-IGLIFIGQPEGDIHVETENLIGTNSEI 252
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,458,815
Number of Sequences: 27780
Number of extensions: 261268
Number of successful extensions: 637
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 635
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1123720628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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