Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0669
         (553 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    29   0.077
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    29   0.13 
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    28   0.23 
DQ370047-1|ABD18608.1|   89|Anopheles gambiae putative secreted ...    27   0.31 
AJ304411-1|CAC39104.1|  187|Anopheles gambiae LDL receptor protein.    27   0.54 
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    24   3.8  
DQ370046-1|ABD18607.1|  125|Anopheles gambiae putative secreted ...    23   5.0  
DQ370036-1|ABD18597.1|  103|Anopheles gambiae putative TIL domai...    23   5.0  
DQ370042-1|ABD18603.1|  194|Anopheles gambiae putative TIL domai...    23   8.8  
AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein p...    23   8.8  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 29.5 bits (63), Expect = 0.077
 Identities = 44/170 (25%), Positives = 60/170 (35%), Gaps = 34/170 (20%)
 Frame = +3

Query: 111  CDQLCHNTDGSYDCLCRTGY---ELDEDGANCRDVDECERDTHTCQQ---ICSNTEGSYE 272
            C +  HNT G +   C  G+    L E   +C +     R T   ++   IC    G+  
Sbjct: 851  CLKCIHNTAGPHCDQCLPGHFGDPLAEPHGSCEECSCYPRGTEQTEKGISICDAINGNCH 910

Query: 273  CS----------CEDGYEK--RGDACVDINECHEEGV----CPS-PGRCVNLLGSFRCVC 401
            C           C++GY     G+ C   N C   G     C +  G C    G     C
Sbjct: 911  CKPNVIGRTCNECKNGYWNIVSGNGCESCN-CDPIGSYNASCDTYSGDCFCKPGVVGKKC 969

Query: 402  ----PRGYRLDAEGARCVDRD-------ECAQTGRCQAPCRNYAGGYRCD 518
                P  Y    +G    D D       +C Q G+C  PC +   G RCD
Sbjct: 970  DKCAPAYYGFSEDGCHACDCDPSGSKGSQCNQYGQC--PCNDNVEGRRCD 1017


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 28.7 bits (61), Expect = 0.13
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -1

Query: 109 GGGRTAHSSRPRTPRPAGRYPGP 41
           G  RT   ++P+ PRP G YP P
Sbjct: 199 GPPRTGTPTQPQPPRPGGMYPQP 221


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 27.9 bits (59), Expect = 0.23
 Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
 Frame = +3

Query: 150 CLCRTGYELDEDGANCRDVDECERDTHTCQQICSNTEGSYECSCEDGYEKRGD--ACVDI 323
           C+C+ G+  +    NC  VD     T T +     T G   C C+ G+ ++ +   C+ +
Sbjct: 58  CVCKKGFVRETQFGNCVPVDTTYNPT-TTKCAAGFTSG---CVCKKGFVRKTEFGKCIPL 113

Query: 324 NEC 332
             C
Sbjct: 114 RLC 116



 Score = 25.0 bits (52), Expect = 1.7
 Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
 Frame = +3

Query: 273 CSCEDGY--EKRGDACVDINECHEEGVCPSPGRCVNLLGSFRCVCPRGYRLDAEGARCVD 446
           C C+ G+  E +   CV ++  +     P+  +C     S  CVC +G+    E  +C+ 
Sbjct: 58  CVCKKGFVRETQFGNCVPVDTTYN----PTTTKCAAGFTS-GCVCKKGFVRKTEFGKCIP 112

Query: 447 RDEC 458
              C
Sbjct: 113 LRLC 116



 Score = 23.8 bits (49), Expect = 3.8
 Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
 Frame = +3

Query: 393 CVCPRGYRLDAEGARCVDRDEC--AQTGRCQAPCRNYAGGYRCDCPVGTVR 539
           CVC +G+  + +   CV  D      T +C A    +  G  C C  G VR
Sbjct: 58  CVCKKGFVRETQFGNCVPVDTTYNPTTTKCAA---GFTSG--CVCKKGFVR 103


>DQ370047-1|ABD18608.1|   89|Anopheles gambiae putative secreted
           peptide protein.
          Length = 89

 Score = 27.5 bits (58), Expect = 0.31
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 393 CVCPRGYRLDAEGARCVDRDEC 458
           C C  GY+ D    +C+  D+C
Sbjct: 55  CACRIGYKRDLTSGKCIAADQC 76



 Score = 26.6 bits (56), Expect = 0.54
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +3

Query: 150 CLCRTGYELDEDGANCRDVDEC 215
           C CR GY+ D     C   D+C
Sbjct: 55  CACRIGYKRDLTSGKCIAADQC 76


>AJ304411-1|CAC39104.1|  187|Anopheles gambiae LDL receptor protein.
          Length = 187

 Score = 26.6 bits (56), Expect = 0.54
 Identities = 16/54 (29%), Positives = 20/54 (37%), Gaps = 2/54 (3%)
 Frame = +3

Query: 213 CERDTHTCQQICSNTEGSYECSCEDGYEKR--GDACVDINECHEEGVCPSPGRC 368
           C      C  IC     SY C+C  G + +  G  C         GVC +  RC
Sbjct: 4   CAHKNGGCSYICLLNPTSYSCACPIGIQLKDNGKTCKSW-PLQLSGVCCTVPRC 56



 Score = 23.8 bits (49), Expect = 3.8
 Identities = 11/33 (33%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
 Frame = +3

Query: 456 CA-QTGRCQAPCRNYAGGYRCDCPVGTVRSPSG 551
           CA + G C   C      Y C CP+G     +G
Sbjct: 4   CAHKNGGCSYICLLNPTSYSCACPIGIQLKDNG 36


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -3

Query: 410 AARTHAAERTQQVHAPPRGRTHALLVTLVYIDTSITPLLI 291
           A R  AA    + H     RTHA L+ +    T+  PL++
Sbjct: 365 AIRLDAAHSEMKGHIKQGRRTHARLLRMELSKTANAPLML 404


>DQ370046-1|ABD18607.1|  125|Anopheles gambiae putative secreted
           polypeptide protein.
          Length = 125

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 17/66 (25%), Positives = 25/66 (37%), Gaps = 11/66 (16%)
 Frame = +3

Query: 294 EKRGDACVDINECHEEGVCPSPGRC--VNLLGSF---------RCVCPRGYRLDAEGARC 440
           E+    CV   EC  + V    G C  +N  G+           C C  G+  +  G RC
Sbjct: 43  EQPEQRCVPTKECPPDEVFKCCGPCYQLNCYGTVLDCAGRCYAECYCASGFVREYPGGRC 102

Query: 441 VDRDEC 458
           + +  C
Sbjct: 103 IPKLFC 108


>DQ370036-1|ABD18597.1|  103|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 103

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 14/48 (29%), Positives = 21/48 (43%)
 Frame = +3

Query: 99  RPPPCDQLCHNTDGSYDCLCRTGYELDEDGANCRDVDECERDTHTCQQ 242
           +P P D  C N   +  C C+  Y     G +C    +C R T T ++
Sbjct: 57  KPEP-DADCTNVCVA-GCFCKKNYVRRAIGGSCIWAKKCPRRTQTTKK 102


>DQ370042-1|ABD18603.1|  194|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 194

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 7/22 (31%), Positives = 9/22 (40%)
 Frame = +3

Query: 150 CLCRTGYELDEDGANCRDVDEC 215
           C C+  Y    DG  C   + C
Sbjct: 172 CFCKPSYIRSSDGGPCIPTNNC 193


>AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein
           protein.
          Length = 285

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 13/47 (27%), Positives = 18/47 (38%), Gaps = 5/47 (10%)
 Frame = +3

Query: 399 CPRGYRLDAEGARCVDRDECAQTGRC-----QAPCRNYAGGYRCDCP 524
           C R Y      ARC  +D  ++  RC     + PC        C+ P
Sbjct: 214 CYRCYEYGHTAARCHGKDRSSKCHRCAEDKHEGPCTRERKCLGCEGP 260


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 487,349
Number of Sequences: 2352
Number of extensions: 10713
Number of successful extensions: 33
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51301854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)