Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0665
         (616 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    39   3e-05
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    25   0.38 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    25   0.38 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    25   0.38 
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    24   1.2  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    23   2.7  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    23   2.7  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   4.7  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   4.7  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   6.2  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   8.2  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   8.2  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    21   8.2  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 39.1 bits (87), Expect = 3e-05
 Identities = 25/66 (37%), Positives = 33/66 (50%)
 Frame = +2

Query: 260  PQFSQADEKITYTLFFKSPTQMGANITNITTTVPGYTLEKLTPNTQYIVWVKAHATAGDS 439
            P  S  +    YT+ +K P         I  TV  YTLEKL   T+Y V+ KA+ + G  
Sbjct: 1418 PHESDVEPIHGYTIHYK-PEFGDWETVQIGPTVEKYTLEKLLCGTRYQVYAKAYNSIGTG 1476

Query: 440  LPSETL 457
             PS+TL
Sbjct: 1477 DPSDTL 1482



 Score = 38.3 bits (85), Expect = 5e-05
 Identities = 22/90 (24%), Positives = 39/90 (43%)
 Frame = +2

Query: 335  ITNITTTVPGYTLEKLTPNTQYIVWVKAHATAGDSLPSETLLAWTDPAYPAYVEPPTVNP 514
            + N+      +  + L  N +Y  WV A  T G+  PS+ +      + PA +   + + 
Sbjct: 1257 VPNLRNQNLSHQAKNLDSNLKYEFWVTAATTIGEGQPSKKVTVSPSASVPAKI--ASFDD 1314

Query: 515  VNLVMEGSSMTILCIAMGTPTPTISLYISG 604
                     +T+ C+A+G P P I+  I G
Sbjct: 1315 TFTTTYKEDVTLPCLAVGLPPPVITWKIKG 1344



 Score = 31.5 bits (68), Expect = 0.006
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
 Frame = +2

Query: 494 EPPTVNPV---NLVMEGSSMTILCIAMGTPTPTISLYISGR 607
           EPP +        V  G+S+ + CIA G PTP I+  + GR
Sbjct: 412 EPPQIRHAFNEETVQPGNSVFLKCIASGNPTPEITWELYGR 452



 Score = 21.0 bits (42), Expect = 8.2
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 539 SMTILCIAMGTPTPTISLY 595
           ++ +LC A G P+P+   Y
Sbjct: 249 NVALLCPAQGFPSPSFRWY 267


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 25.4 bits (53), Expect = 0.38
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +3

Query: 249 PGSHRSSRKLTRRSPTHYSSNLQLKWVQISRIS 347
           PG++ ++  +  R+P H SS +   WV +  IS
Sbjct: 108 PGNYANASSVGSRNPIHTSSYMTGIWVWLINIS 140


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 25.4 bits (53), Expect = 0.38
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +3

Query: 249 PGSHRSSRKLTRRSPTHYSSNLQLKWVQISRIS 347
           PG++ ++  +  R+P H SS +   WV +  IS
Sbjct: 341 PGNYANASSVGSRNPIHTSSYMTGIWVWLINIS 373


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 25.4 bits (53), Expect = 0.38
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +3

Query: 249 PGSHRSSRKLTRRSPTHYSSNLQLKWVQISRIS 347
           PG++ ++  +  R+P H SS +   WV +  IS
Sbjct: 341 PGNYANASSVGSRNPIHTSSYMTGIWVWLINIS 373


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -2

Query: 132 SEEPCSLTATTNAWHVLFTSKLS 64
           +EEP  L  T  +W VL+TS  S
Sbjct: 47  NEEPEKLHFTFKSWKVLYTSLTS 69


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +1

Query: 43  HDGHHPTRELGGE 81
           ++GHH TR++G E
Sbjct: 331 NEGHHATRKMGPE 343


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +1

Query: 43  HDGHHPTRELGGE 81
           ++GHH TR++G E
Sbjct: 331 NEGHHATRKMGPE 343


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = +2

Query: 236 WLTLTWQPPQFSQADEKITYTLFFKSPTQM 325
           W +   + P F + D K+T  L+   P+ +
Sbjct: 419 WSSPLTESPYFEKLDVKVTVQLWLGDPSSV 448


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = +2

Query: 437 SLPSETLLAWTDPAYPAYVEPPTVN 511
           S P  T   W+    P  V  PT+N
Sbjct: 298 SAPGPTYSTWSTVQTPTTVMSPTIN 322


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = +1

Query: 499 PDGKPREPGDGRLQHDNPLHRHGNTN 576
           P   P E  D  +  +NP ++  N N
Sbjct: 214 PPPPPEEDDDSNIPQNNPKNKQHNFN 239


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 11/37 (29%), Positives = 13/37 (35%)
 Frame = +2

Query: 353 TVPGYTLEKLTPNTQYIVWVKAHATAGDSLPSETLLA 463
           TV G   +  TPN    VW        D +    L A
Sbjct: 131 TVLGAACQVCTPNATNTVWSHCQCVLADGVERGILTA 167


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 11/37 (29%), Positives = 13/37 (35%)
 Frame = +2

Query: 353 TVPGYTLEKLTPNTQYIVWVKAHATAGDSLPSETLLA 463
           TV G   +  TPN    VW        D +    L A
Sbjct: 131 TVLGAACQVCTPNATNTVWSHCQCVLADGVERGILTA 167


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +1

Query: 532 RLQHDNPLHRHGNTNP 579
           R QH+  +H   N NP
Sbjct: 97  RAQHEKGMHDQQNNNP 112


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,858
Number of Sequences: 336
Number of extensions: 4120
Number of successful extensions: 21
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)