Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0663
         (551 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    28   0.047
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    23   1.8  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    23   2.3  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   2.3  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   5.4  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      21   7.2  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 28.3 bits (60), Expect = 0.047
 Identities = 15/80 (18%), Positives = 33/80 (41%)
 Frame = +1

Query: 292 PDDLKVSRSSYANSLERPKSEMMKKLLAKNPILNVHIDQSTQREASTSAEVQTPMTDASK 471
           PDD+ + +   +    +P   +       +PIL+    ++ + +A+++    TP+   + 
Sbjct: 107 PDDVFIRKFETSFESGKPSGVISTNTSPPSPILSNRFGENEEADAASNVISSTPLPPTTS 166

Query: 472 SAMHQPDIVNFDLKPSEMKT 531
           +         F  KPS   T
Sbjct: 167 TTTRTTLTTKFTTKPSTKPT 186


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +1

Query: 172 TVAPWAPPDNDPPTQPNLTKLETTPTK 252
           +V+P  PP   PP +  LT  +   +K
Sbjct: 92  SVSPTTPPTPSPPPEERLTPSKDASSK 118


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +1

Query: 298 DLKVSRSSYANSLERPKSEMMKKLLAKNPI 387
           +L V    + N + RP    + K LA++PI
Sbjct: 472 ELPVFLQEHRNGMYRPSIYFISKTLAESPI 501


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +1

Query: 298 DLKVSRSSYANSLERPKSEMMKKLLAKNPI 387
           +L V    + N + RP    + K LA++PI
Sbjct: 472 ELPVFLQEHRNGMYRPSIYFISKTLAESPI 501


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +2

Query: 389 STYTSTRARKERLLPVPKSKRR*LTLRNPP 478
           ST T T  +  R  P P  + +  +L  PP
Sbjct: 253 STCTRTTLKNNRASPYPMQRPKSASLSPPP 282


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -2

Query: 424 PLFACSGRC 398
           P FAC GRC
Sbjct: 61  PSFACIGRC 69


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,805
Number of Sequences: 336
Number of extensions: 3000
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13621010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)