Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0663
(551 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC342.05 |crb2|rhp9, rhp9|DNA repair protein RAD9 homolog, Rhp... 33 0.021
SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces... 30 0.26
SPAC23C4.13 |bet1||SNARE Bet1|Schizosaccharomyces pombe|chr 1|||... 29 0.34
SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyce... 29 0.34
SPBC1734.16c |pst3||SIN3 family co-repressor|Schizosaccharomyces... 29 0.46
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 27 1.4
SPAC13A11.03 |mcp7|mug32|meiosis specific coiled-coil protein Mc... 27 1.8
SPBC660.17c |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 27 1.8
SPCC320.07c |mde7||RNA-binding protein Mde7|Schizosaccharomyces ... 27 2.4
SPBC23G7.04c |nif1||SEL1 repear protein Nif1|Schizosaccharomyces... 26 3.2
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 26 4.2
SPBC21D10.05c |ucp3|soc2|GTPase activating protein Ucp3 |Schizos... 26 4.2
SPAC1486.09 |||ribosome biogenesis protein Nob1 |Schizosaccharom... 26 4.2
SPAC144.17c |||6-phosphofructo-2-kinase|Schizosaccharomyces pomb... 26 4.2
SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2 |... 26 4.2
SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces ... 25 5.6
SPAC7D4.04 |taf1||Taz1 interacting factor 1|Schizosaccharomyces ... 25 5.6
SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyce... 25 7.4
SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 25 7.4
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 25 7.4
SPBC1703.05 |||protein kinase, RIO family|Schizosaccharomyces po... 25 9.8
SPBC1709.11c |png2||ING family homolog Png2|Schizosaccharomyces ... 25 9.8
SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein 4|Schizosacc... 25 9.8
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 25 9.8
SPCC736.14 |dis1||microtubule-associated protein Dis1 |Schizosac... 25 9.8
SPAC1782.09c |clp1|flp1|Cdc14-related protein phosphatase Clp1/F... 25 9.8
>SPBC342.05 |crb2|rhp9, rhp9|DNA repair protein RAD9 homolog,
Rhp9|Schizosaccharomyces pombe|chr 2|||Manual
Length = 778
Score = 33.5 bits (73), Expect = 0.021
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Frame = +1
Query: 211 TQPNLTKLETTPTKYDEKITMNYDTNIPDDLKVSRSSYANSLERPKSEMMKKLLAKNPIL 390
T+P+ K++ T TK+ +K D N P+ V SSY S P + + + + +
Sbjct: 255 TEPSSEKVDNTETKFSKKTKNINDENFPNPFNVI-SSYETSAS-PSTVIDQSSQVSSIFV 312
Query: 391 NVHIDQSTQREA---STSAEVQTPMTDA 465
N + +S +A S S + TP D+
Sbjct: 313 NKRLRKSVNNQAISRSDSLSLDTPKIDS 340
>SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 324
Score = 29.9 bits (64), Expect = 0.26
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +1
Query: 226 TKLETTPTKYDEKITMNYDTNIPDDLKVSRSSYANSLERPKSEMMK 363
TK+ TT K + ++N N P K SR+ LER K+EM K
Sbjct: 109 TKI-TTAEKSSVQSSLNTKENTPQQPKKSRNRQKERLERRKAEMKK 153
>SPAC23C4.13 |bet1||SNARE Bet1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 117
Score = 29.5 bits (63), Expect = 0.34
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 174 GSTLGTTRQRSADTT*PYETRNDTDQIR*EN-NDELRHKYTGRLKSIAQ 317
GS G ++R+ D YE+++ EN NDE K TG++KS+ +
Sbjct: 2 GSRFGRRKERNGDMLPLYESQSPQHLDSLENENDERISKLTGKVKSLKE 50
>SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 642
Score = 29.5 bits (63), Expect = 0.34
Identities = 27/130 (20%), Positives = 58/130 (44%)
Frame = +3
Query: 66 IGSERETSDHLAKRIMDENMKVHLKLVSEFAKTTSDGSTLGTTRQRSADTT*PYETRNDT 245
IG +E+++ + K+ N +V + + + + S TT S+++ +
Sbjct: 3 IGKRKESTE-VKKKDGSMNKRVKVAKLPKKVDSFSPKKKKNTTSSGSSESDSMSQNDKKK 61
Query: 246 DQIR*ENNDELRHKYTGRLKSIAQFVREQLGETKIRDDEETARQKSYTQRTHRPEHAKRG 425
D E+ DE + G +S ++ + E++ +DEE++ QKS ++ +H +
Sbjct: 62 DSSLNESEDE---DFAGFGESASENDELESAESEAENDEESSSQKSNSKESHAQRKKLQK 118
Query: 426 FYQCRSPNAD 455
+ P AD
Sbjct: 119 ERKAMKPFAD 128
>SPBC1734.16c |pst3||SIN3 family co-repressor|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1154
Score = 29.1 bits (62), Expect = 0.46
Identities = 23/109 (21%), Positives = 46/109 (42%), Gaps = 5/109 (4%)
Frame = +1
Query: 193 PDNDPPTQPNLTKLETTPTKYDEKITMNYDTNIPDDLKVSRSSYANSLER--PKSEMMKK 366
PDN T+P+ ++ +P + + + P K +R +++ + R K+ M +
Sbjct: 320 PDNVDSTEPSTPNVQKSPNRLPPVGNFSLPPSAPVREKRNRPAHSAQISRSISKTSRMYR 379
Query: 367 LLAKNPI--LNVHI-DQSTQREASTSAEVQTPMTDASKSAMHQPDIVNF 504
A+ P+ ++H+ Q S A Q + + H PD + F
Sbjct: 380 QTAEEPLNSYSLHVYPQKITAPTSPYAATQEELLAFTTIRQHLPDTLAF 428
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 27.5 bits (58), Expect = 1.4
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Frame = +1
Query: 190 PPDNDPPTQPNLTKLETTPTKYDEK---ITMNYDTNIP 294
PP P + PN+T + +P + E+ I + D+NIP
Sbjct: 112 PPPPQPQSHPNVTVISASPARAIEQQPTILSSTDSNIP 149
>SPAC13A11.03 |mcp7|mug32|meiosis specific coiled-coil protein
Mcp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 210
Score = 27.1 bits (57), Expect = 1.8
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 259 EKI-TMNYDTNIPDDLKVSRSSYANSLERPKSEMMKKLLAKNPILNVHIDQSTQREAST 432
EKI T NY + P D K SR S SL+ ++ +K +K N+ ++S + T
Sbjct: 61 EKIGTSNYYWSFPSDAKRSRESVLGSLQAQLDDLKQK--SKTLDENISFEKSKRDNEGT 117
>SPBC660.17c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 172
Score = 27.1 bits (57), Expect = 1.8
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -2
Query: 199 CLVVPRVLPSEVVLANSDTSFKWTFMF 119
C V LP EV L N T KW F+F
Sbjct: 82 CAYVMYFLPLEVGLFNPKTPNKWKFLF 108
>SPCC320.07c |mde7||RNA-binding protein Mde7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 761
Score = 26.6 bits (56), Expect = 2.4
Identities = 9/35 (25%), Positives = 22/35 (62%)
Frame = +1
Query: 238 TTPTKYDEKITMNYDTNIPDDLKVSRSSYANSLER 342
TTP+ Y ++++ NYD+ P + S +++ + + +
Sbjct: 308 TTPSLYSQRLSNNYDSTTPGFPRFSPANFDSVINK 342
>SPBC23G7.04c |nif1||SEL1 repear protein Nif1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 681
Score = 26.2 bits (55), Expect = 3.2
Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 9/92 (9%)
Frame = +1
Query: 145 YRNSLRPLQTVAPWAPPDN--------DPPTQPNLTKLETTPTKYDEKITMNYDT-NIPD 297
Y + + P +T + +P N +PP +P T+ T+P K + DT + D
Sbjct: 182 YYHEIEPPRTASNTSPTPNSIKSAHPAEPPKRPAFTRSATSPDKILPTRIKSKDTVSSGD 241
Query: 298 DLKVSRSSYANSLERPKSEMMKKLLAKNPILN 393
+S SS + + S L+ NP L+
Sbjct: 242 STPLSGSSSSKGMLMSMSTSENHSLSSNPELS 273
>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
1|||Manual
Length = 468
Score = 25.8 bits (54), Expect = 4.2
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 11/108 (10%)
Frame = +3
Query: 105 RIMDENMKVHLKLVSEFAKTTSDGSTLGTTRQRSADTT*PYETRNDTDQIR*ENNDELRH 284
+I+DE K +L+ +S+ +T L Q S DT RN+ +++R + ND
Sbjct: 126 KIVDE--KKYLREISQCNRTRKSFVELNAL-QTSIDTI-----RNELNELRDQLNDSESK 177
Query: 285 KYTGR---LKSIAQFVREQLG-----ETKI---RDDEETARQKSYTQR 395
K + + ++S VR+Q + K+ RDDE+TA Y QR
Sbjct: 178 KLSDKFVEIRSELDEVRKQQDGYYKDQRKLIAERDDEKTALDDLYNQR 225
>SPBC21D10.05c |ucp3|soc2|GTPase activating protein Ucp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 601
Score = 25.8 bits (54), Expect = 4.2
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +1
Query: 244 PTKYDEKITMNYDTNIPDDLKVSRSSYANSLERP 345
P + +M YDTN+P D + Y N + P
Sbjct: 526 PATMNYSNSMGYDTNVPADNGYYQQGYGNVMMPP 559
>SPAC1486.09 |||ribosome biogenesis protein Nob1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 388
Score = 25.8 bits (54), Expect = 4.2
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 135 LKLVSEFAKTTSDGSTLGTT 194
+K VSEFAK T D S+L T
Sbjct: 65 IKKVSEFAKQTGDYSSLSVT 84
>SPAC144.17c |||6-phosphofructo-2-kinase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 25.8 bits (54), Expect = 4.2
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +2
Query: 377 KILYSTYTSTRARKERLLPVPKSKRR*LTLRNP 475
+IL+ T ARK R+ VPK+ R L LR P
Sbjct: 248 RILFLLMNMTLARK-RIFLVPKASMRPLKLREP 279
>SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 760
Score = 25.8 bits (54), Expect = 4.2
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = +1
Query: 373 AKNPILNVHIDQSTQREAST--SAEVQTPMTDASKSAMHQP 489
A P+L + +T E T + EVQTP+ D S H P
Sbjct: 470 ANVPLLGLSNKATTASETGTVNAEEVQTPVADVIGSLNHPP 510
>SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1147
Score = 25.4 bits (53), Expect = 5.6
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = +1
Query: 208 PTQPNLTKLETTPTKYDEKITMNYDTNIPDDLKVSRSSYANSLERP 345
PT+PN +K TTP+ ++ ++++N+ K+S S+ ++P
Sbjct: 15 PTKPNFSKTSTTPS--TSQLKHSHESNV----KMSTSTVTEHRKKP 54
>SPAC7D4.04 |taf1||Taz1 interacting factor 1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 926
Score = 25.4 bits (53), Expect = 5.6
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +1
Query: 223 LTKLETTPTKYDEKITMNYDTNIPDDLKVSRSSYANSLERPKSEMM 360
+ K+E+T T K NY+T I D ++ +S+ + KS ++
Sbjct: 270 ILKIESTSTTSQIKPKCNYETEITDCMEKLQSNLSELKSSRKSSLI 315
>SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 604
Score = 25.0 bits (52), Expect = 7.4
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = +3
Query: 318 FVREQLGETKIRDDEETARQKSYTQRTHRPEHAKRGFYQCRSPN 449
F RE G DD T T R HR ++ R Y RSP+
Sbjct: 92 FQREDSG---YNDDVVTNSSSHRTPRHHRRSYSPRSDYGSRSPS 132
>SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 25.0 bits (52), Expect = 7.4
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +2
Query: 389 STYTSTRARKERLLPVPKSKRR*LTLRNPPCTNPT*STSI*NPPK*KLKITRTS 550
ST++ T ++P P + T PP T+ +T++ PP L T T+
Sbjct: 57 STHSVTSTNITSIVPPPSTSHNSTTTTVPPTTSMNTTTTV--PPTTSLNTTTTT 108
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 25.0 bits (52), Expect = 7.4
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = +1
Query: 163 PLQTVAPWAP--PDNDPPTQPNLTKLETTPTKYDEKI 267
P+ +P P P + PP PNL KL+ P + I
Sbjct: 167 PVSLPSPNLPHQPISKPPVIPNLPKLQVHPNRLPHPI 203
>SPBC1703.05 |||protein kinase, RIO family|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 336
Score = 24.6 bits (51), Expect = 9.8
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = -3
Query: 495 YVGLVHGGFRSVSHRRLDFGTGRSLSLRALVDVYVEYRIFGEQF---LHHLGFWSLQAVR 325
Y G + +++S R + G + + DVYV G+Q+ +H LG S ++V+
Sbjct: 69 YAGYDYLALKALSKRASVYSVGNQIGVGKESDVYVVGDQKGKQYILKIHRLGRISFRSVK 128
>SPBC1709.11c |png2||ING family homolog Png2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 305
Score = 24.6 bits (51), Expect = 9.8
Identities = 15/63 (23%), Positives = 26/63 (41%)
Frame = +1
Query: 295 DDLKVSRSSYANSLERPKSEMMKKLLAKNPILNVHIDQSTQREASTSAEVQTPMTDASKS 474
+D +SSY +R K+ + +K + H QST+R +E + T+
Sbjct: 172 EDASSPQSSYHTPTKRRKNAVPRKSSSPPLSSTKHAPQSTERRPVRRSESRLKQTNGEPL 231
Query: 475 AMH 483
H
Sbjct: 232 VKH 234
>SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein
4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 636
Score = 24.6 bits (51), Expect = 9.8
Identities = 25/120 (20%), Positives = 47/120 (39%), Gaps = 3/120 (2%)
Frame = +1
Query: 169 QTVAPWAPPDNDPPTQPNLTKLETTPT--KYDEKITMNYDTNIPDDLKVSRSSYANSLER 342
+T P P PP+ PN K +P+ K + + ++N P + SS SL+
Sbjct: 30 ETTEPPPPSSQQPPSTPN-GKEAASPSALKQNVRPSLNSVQQTPASIDAVASSSNVSLQ- 87
Query: 343 PKSEMMKKLLAKNPILNVHI-DQSTQREASTSAEVQTPMTDASKSAMHQPDIVNFDLKPS 519
+ + K +++ P + S S+ P + A H ++ + + PS
Sbjct: 88 SQQPLSKPVVSSKPNQTTAMPPPSNNPSRHVSSTSNKPAAVSPNPAAHHAELPSGSVPPS 147
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 24.6 bits (51), Expect = 9.8
Identities = 8/28 (28%), Positives = 17/28 (60%)
Frame = +3
Query: 339 ETKIRDDEETARQKSYTQRTHRPEHAKR 422
+ ++ +DE AR+ + +HRPE ++
Sbjct: 86 QRQLEEDERCARELANRYNSHRPERRRK 113
>SPCC736.14 |dis1||microtubule-associated protein Dis1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 882
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 489 GLVHGGFRSVSHRRLDFGTGRSLS 418
G+V G SVS + +GT RSL+
Sbjct: 814 GMVSSGIHSVSTKPSSYGTRRSLA 837
>SPAC1782.09c |clp1|flp1|Cdc14-related protein phosphatase
Clp1/Flp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 537
Score = 24.6 bits (51), Expect = 9.8
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +1
Query: 151 NSLRPLQTVAPWAPPDNDPPTQPNLTKLETTPT-KYDEKITMNYDTNIPDDLKVSRSSYA 327
N PL P P P+ +L + + K++EK+ +I ++ K S SSY
Sbjct: 379 NISTPLPEPTPGQPRKVSGHNPPSARRLPSASSVKFNEKLKNASKQSIQNENKASYSSYE 438
Query: 328 NS 333
+S
Sbjct: 439 DS 440
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,369,095
Number of Sequences: 5004
Number of extensions: 51216
Number of successful extensions: 207
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 207
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 229961028
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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