Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0663
(551 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05) 34 0.067
SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.067
SB_36217| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.63
SB_28668| Best HMM Match : UCH (HMM E-Value=8e-12) 31 0.83
SB_1703| Best HMM Match : Extensin_2 (HMM E-Value=0.26) 30 1.4
SB_52278| Best HMM Match : Ery_res_leader1 (HMM E-Value=0.94) 29 1.9
SB_53775| Best HMM Match : Involucrin2 (HMM E-Value=7.1e-12) 29 2.5
SB_34296| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_47305| Best HMM Match : I-set (HMM E-Value=0) 29 2.5
SB_26138| Best HMM Match : RhoGEF (HMM E-Value=0.0011) 29 2.5
SB_29642| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_27280| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_19362| Best HMM Match : M (HMM E-Value=0.0014) 29 3.3
SB_38133| Best HMM Match : TolA (HMM E-Value=0.38) 28 4.4
SB_28059| Best HMM Match : DUF149 (HMM E-Value=0.71) 28 4.4
SB_25798| Best HMM Match : FA_desaturase (HMM E-Value=0) 28 4.4
SB_49130| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_8726| Best HMM Match : Pox_F16 (HMM E-Value=5.2) 28 5.8
SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
>SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05)
Length = 3397
Score = 34.3 bits (75), Expect = 0.067
Identities = 18/93 (19%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Frame = +1
Query: 253 YDEKITMNYDTNIPDDLKVSRSSYANSLERPKSEMMKKLLAKNPILNVHI--DQSTQREA 426
+DEK DTN P+ ++ + + ++++++ + ++ V I + E
Sbjct: 420 FDEKGNHVQDTNAPESEELPTDCELEDVSDEQGRVVRRIVKRYIVVKVFIINHEGQLEEI 479
Query: 427 STSAEVQTPMTDASKSAMHQPDIVNFDLKPSEM 525
S E + + ++S++ +P +++ D KP +M
Sbjct: 480 EISPEEKAEILESSQTQTTKPSVISLDEKPLKM 512
>SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2208
Score = 34.3 bits (75), Expect = 0.067
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Frame = +1
Query: 214 QPNLTKLETTPTKYDE--KITMNYDTNIPDDLKVSRSSYANSLERPKSEMMKKLLAKNPI 387
+ +L++L + D+ +I I D LK +R A SLE ++ KKL A+ I
Sbjct: 718 EEDLSRLSVKNDELDKAIRICSKEKEGIEDSLKHARDQIA-SLESSSTDASKKLRAEIKI 776
Query: 388 LNVHIDQSTQREASTSAEVQTPMTDASK 471
L + Q +Q + + T M ASK
Sbjct: 777 LEAQLKQKSQTVDELKSTMDTLMDSASK 804
>SB_36217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1356
Score = 31.1 bits (67), Expect = 0.63
Identities = 18/79 (22%), Positives = 40/79 (50%)
Frame = +1
Query: 310 SRSSYANSLERPKSEMMKKLLAKNPILNVHIDQSTQREASTSAEVQTPMTDASKSAMHQP 489
+ S+ + P+S+++++LLA +L + + Q A T A + T A++ +H+P
Sbjct: 154 AESAECQQVTAPQSKLIQELLASQKVLTEGLQRQQQVLADTQASLATL---ANRPFLHEP 210
Query: 490 DIVNFDLKPSEMKTKDYED 546
+ +P++ + ED
Sbjct: 211 TRPGYPQEPNDWAQQWKED 229
>SB_28668| Best HMM Match : UCH (HMM E-Value=8e-12)
Length = 893
Score = 30.7 bits (66), Expect = 0.83
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +1
Query: 241 TPTKYDEKITMNYDTNIPDDLKVSRSSYAN 330
+PT D K T+ YDTN+ D+ KV ++S N
Sbjct: 352 SPTTMDRK-TVGYDTNLVDETKVPQNSNVN 380
>SB_1703| Best HMM Match : Extensin_2 (HMM E-Value=0.26)
Length = 307
Score = 29.9 bits (64), Expect = 1.4
Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 5/98 (5%)
Frame = +1
Query: 175 VAPWAPPDNDPPTQPNLTKLET-TPTKYDEKI----TMNYDTNIPDDLKVSRSSYANSLE 339
+ PW P+ DPP + +++ T T + D + + P+ S+ A S
Sbjct: 43 IPPWTAPEQDPPRGQHQSRIPTWTAPQQDPPVDSARARSPPWTAPEPNPPVDSARARSFR 102
Query: 340 RPKSEMMKKLLAKNPILNVHIDQSTQREASTSAEVQTP 453
+ + A P LN H+D +T R + + P
Sbjct: 103 GQRKSQIPTWTA--PELNPHVDSATSRNPRGQRQSKIP 138
>SB_52278| Best HMM Match : Ery_res_leader1 (HMM E-Value=0.94)
Length = 592
Score = 29.5 bits (63), Expect = 1.9
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +3
Query: 9 RHEAKSTKITTREPNPDCGI-GSERETSDHLAKRIMDENMKVHLKLVSEFAKTTSD--GS 179
R + S+ TR+PN + I G E D L KR+ +EN K + ++A T D GS
Sbjct: 76 RRKISSSPFPTRKPNINTVIQGRIVEGLDILTKRVNEENEKDDIVQEWQYAATVLDRQGS 135
Query: 180 TLGTTRQR 203
G +R
Sbjct: 136 QRGERERR 143
>SB_53775| Best HMM Match : Involucrin2 (HMM E-Value=7.1e-12)
Length = 1879
Score = 29.1 bits (62), Expect = 2.5
Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
Frame = +1
Query: 232 LETTPTKYDEKI-TMNYDTNIPDDLKVSRSSYANSLERPKSEMMKKLLAKNPILNVHIDQ 408
+E T +E I +M ++ +S + S E P M ++ +K P L V Q
Sbjct: 1613 VEQQQTSQEEPILSMKQQQTSQEEPILSMEQHQTSQEEPALSMEQQQTSKKPTLGVEQQQ 1672
Query: 409 STQREASTSAEVQTPMTDASKSAMHQ 486
++Q E S + Q + +M Q
Sbjct: 1673 TSQEEPILSMKQQQTSQEEPILSMEQ 1698
Score = 27.9 bits (59), Expect = 5.8
Identities = 21/86 (24%), Positives = 35/86 (40%), Gaps = 1/86 (1%)
Frame = +1
Query: 232 LETTPTKYDEKI-TMNYDTNIPDDLKVSRSSYANSLERPKSEMMKKLLAKNPILNVHIDQ 408
+E T +E I +M ++ +S S E P M ++ +K P L V Q
Sbjct: 1668 VEQQQTSQEEPILSMKQQQTSQEEPILSMEQQRTSQEEPALSMEQQQTSKKPTLGVEQQQ 1727
Query: 409 STQREASTSAEVQTPMTDASKSAMHQ 486
++Q E S + Q + +M Q
Sbjct: 1728 TSQEEPILSMKQQQTSQEEPILSMEQ 1753
>SB_34296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3464
Score = 29.1 bits (62), Expect = 2.5
Identities = 22/69 (31%), Positives = 34/69 (49%)
Frame = +3
Query: 186 GTTRQRSADTT*PYETRNDTDQIR*ENNDELRHKYTGRLKSIAQFVREQLGETKIRDDEE 365
G TR RS DTT P E NDT + ++ H R S A+ +Q +K D+++
Sbjct: 2457 GVTRSRSQDTTIPEEYVNDTFESL-DSTRTPTHSTPVRKASPARDSLKQRSSSK-EDEQK 2514
Query: 366 TARQKSYTQ 392
+ + S T+
Sbjct: 2515 SEEETSMTE 2523
>SB_47305| Best HMM Match : I-set (HMM E-Value=0)
Length = 5832
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = -3
Query: 411 ALVDVYVEYRIFGEQFLHHLGFWSLQAVRVR 319
AL+D+ V+ R+FG +F+ G WS + VR R
Sbjct: 4138 ALIDLTVKERLFGPEFIEEDGKWS-KIVRER 4167
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -3
Query: 420 SLRALVDVYVEYRIFGEQFLHHLGFWS 340
S ++VD+ V+ R+FG +FL G W+
Sbjct: 3365 STGSVVDLTVKERLFGPEFLEEEGVWN 3391
>SB_26138| Best HMM Match : RhoGEF (HMM E-Value=0.0011)
Length = 1199
Score = 29.1 bits (62), Expect = 2.5
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = +1
Query: 277 YDTN--IPDDLKVSRSSYANSLERPKSEMMKKLLAKNPILNVHIDQSTQREASTSAEVQT 450
Y TN I D+ RSSYA+ L+ P+ + ++ LA PI + + + E + E+
Sbjct: 222 YRTNEIISTDIN-RRSSYADQLQSPRFQRKERPLAHVPIPSFEEFKRRKSEVQNTNELSA 280
Query: 451 PMTDASKSAMHQP 489
T+ ++ + P
Sbjct: 281 QNTEQARKYSNVP 293
>SB_29642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 276
Score = 28.7 bits (61), Expect = 3.3
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +1
Query: 169 QTVAPWAPPDNDPPTQPNL----TKLETTPTKYDEKITMNYDTNIPDD 300
+ VA AP DN PPT+P T ++TPT+ + + T P D
Sbjct: 225 EPVAEPAPNDNQPPTEPRTSTPGTPAKSTPTQSGPPLRRSTRTVKPPD 272
>SB_27280| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 980
Score = 28.7 bits (61), Expect = 3.3
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +1
Query: 169 QTVAPWAPPDNDPPTQPNL----TKLETTPTKYDEKITMNYDTNIPDD 300
+ VA AP DN PPT+P T ++TPT+ + + T P D
Sbjct: 929 EPVAEPAPNDNQPPTEPRTSTPGTPAKSTPTQSGPPLRRSTRTVKPPD 976
>SB_19362| Best HMM Match : M (HMM E-Value=0.0014)
Length = 722
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = +1
Query: 283 TNIPDDLKVSRSSYANSLERPKSEMMKKLLAKNPILNVHIDQSTQREASTSAEVQT 450
+ + DDLKVS SY +E+ K ++++ L H Q+ + QT
Sbjct: 97 SKLEDDLKVSLLSYFEQVEKQKEDLIESFNVMQQQLTRHQQMCQQQSKEMEDKEQT 152
>SB_38133| Best HMM Match : TolA (HMM E-Value=0.38)
Length = 2114
Score = 28.3 bits (60), Expect = 4.4
Identities = 24/109 (22%), Positives = 44/109 (40%), Gaps = 2/109 (1%)
Frame = +1
Query: 172 TVAPWAPPDNDPPTQPNLTKLETTPTKYDEKITMNYDTN--IPDDLKVSRSSYANSLERP 345
TV P P PT P + L K + + + + N +P ++ V N ++ P
Sbjct: 1268 TVVPTNPGPGLAPT-PTMPTLAGDGYKIETSLRLKFGENKQLPLNMIVGDKDNTNLVKMP 1326
Query: 346 KSEMMKKLLAKNPILNVHIDQSTQREASTSAEVQTPMTDASKSAMHQPD 492
+++ NP+ H D+ +E S + + T +T + PD
Sbjct: 1327 LGPSRERI--NNPM---HFDEDMYQERSMAGQAVTTVTPSKPDIRPTPD 1370
>SB_28059| Best HMM Match : DUF149 (HMM E-Value=0.71)
Length = 1043
Score = 28.3 bits (60), Expect = 4.4
Identities = 24/109 (22%), Positives = 44/109 (40%), Gaps = 2/109 (1%)
Frame = +1
Query: 172 TVAPWAPPDNDPPTQPNLTKLETTPTKYDEKITMNYDTN--IPDDLKVSRSSYANSLERP 345
TV P P PT P + L K + + + + N +P ++ V N ++ P
Sbjct: 232 TVVPTNPGPGLAPT-PTMPTLAGDGYKIETSLRLKFGENKQLPLNMIVGDKDNTNLVKMP 290
Query: 346 KSEMMKKLLAKNPILNVHIDQSTQREASTSAEVQTPMTDASKSAMHQPD 492
+++ NP+ H D+ +E S + + T +T + PD
Sbjct: 291 LGPSRERI--NNPM---HFDEDMYQERSMAGQAVTTVTPSKPDIRPTPD 334
>SB_25798| Best HMM Match : FA_desaturase (HMM E-Value=0)
Length = 268
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/47 (27%), Positives = 19/47 (40%)
Frame = -3
Query: 192 WCPGCYRLKWS*RIPIQASNGLSCSRP*FSWLNDRMSRVRFQYRSPD 52
W ++ KW R+ I N ++ F W D RV +Y D
Sbjct: 28 WAHRTFKAKWPLRLVIMLMNSMAAQNDIFEWSRDH--RVHHKYSETD 72
>SB_49130| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 665
Score = 28.3 bits (60), Expect = 4.4
Identities = 17/74 (22%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +1
Query: 310 SRSSYANSLERPKSEMMKKLLAKNPILNVHIDQSTQREASTSAEVQTPMTDA---SKSAM 480
+ S+ + P+S+++++LLA +L + + Q A T A + T A + +
Sbjct: 242 TESAECQQVTAPQSKLIQELLASQKVLTEGLQKQHQVLADTQASLATLANRACWPHQPFL 301
Query: 481 HQPDIVNFDLKPSE 522
H+P + KP +
Sbjct: 302 HEPTRPGYPQKPDD 315
>SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1077
Score = 28.3 bits (60), Expect = 4.4
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +1
Query: 187 APPDNDPPTQPNLTKLETTPTKYDEKITMNYDTNIPDDLKVSRSSYANSLERPKSE 354
+P + P P TK E TP + +T+ + D +VSR S N ++ K++
Sbjct: 41 SPKRSLPRLSPKFTKKEKTPNGKNLSLTLETGSADTLDGEVSRDSLVNGTKQKKNK 96
>SB_8726| Best HMM Match : Pox_F16 (HMM E-Value=5.2)
Length = 244
Score = 27.9 bits (59), Expect = 5.8
Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
Frame = +1
Query: 145 YRNSLRPLQTVAPWAPPDNDPPTQPNLTKLETTPTKYDEKITMNYDTNI-PDDLKVSRSS 321
Y + +RP V +A P +P T ++ KLE +T YD DL S +
Sbjct: 145 YFSMIRP---VMEYASPVWNPFTDRDINKLEQVQKNAARFVTGTYDPRASSSDLVKSLNW 201
Query: 322 YANSLERPKSEMMKKLLAKNPILNVHIDQSTQREAST 432
+ + R +++ +N ++N+ + Q Q + ST
Sbjct: 202 DSLEVRRQLAQLCLFYKIRNNLVNIALPQQFQPKLST 238
>SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1417
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = +1
Query: 163 PLQTVAPWAPPDNDPPTQPNLTK----LETTPTKYDEKITMNYDTNIPDDLKVS 312
P T +P + PP+ P++ + + +TPT D++ T + + PD L V+
Sbjct: 714 PQTTTSPSQQTTSPPPSSPSIGQPWIPVTSTPTHADQRETDQQEGSKPDTLTVT 767
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,252,726
Number of Sequences: 59808
Number of extensions: 396007
Number of successful extensions: 1710
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1705
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1276425465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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