Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0663
(551 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U20861-11|AAA62291.2| 1714|Caenorhabditis elegans Hypothetical p... 29 2.2
Z93379-2|CAB07592.1| 170|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z75527-4|CAA99779.2| 316|Caenorhabditis elegans Hypothetical pr... 28 3.9
DQ178236-1|ABA18178.1| 316|Caenorhabditis elegans putative low ... 28 3.9
AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical... 28 3.9
U28940-3|AAD31556.1| 1212|Caenorhabditis elegans Transbilayer am... 28 5.1
U28940-1|AAD31557.1| 1454|Caenorhabditis elegans Transbilayer am... 28 5.1
Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical pr... 27 6.8
AL033536-10|CAN86926.1| 345|Caenorhabditis elegans Hypothetical... 27 6.8
AL033536-9|CAA22140.1| 344|Caenorhabditis elegans Hypothetical ... 27 6.8
AF067618-2|AAC19195.1| 920|Caenorhabditis elegans Nuclear hormo... 27 6.8
Z68751-2|CAA92972.2| 193|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z68161-9|CAA92298.2| 688|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z50857-3|CAC42284.1| 753|Caenorhabditis elegans Hypothetical pr... 27 9.0
U61945-5|AAB03128.1| 517|Caenorhabditis elegans Hypothetical pr... 27 9.0
U39667-6|AAC69011.2| 640|Caenorhabditis elegans Disorganized mu... 27 9.0
AY095447-1|AAM23316.1| 640|Caenorhabditis elegans DIM-1(L) prot... 27 9.0
AF136238-1|AAD34462.1| 753|Caenorhabditis elegans DAF-12 A1 pro... 27 9.0
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 27 9.0
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 27 9.0
AC006674-4|AAF39940.1| 402|Caenorhabditis elegans Hypothetical ... 27 9.0
>U20861-11|AAA62291.2| 1714|Caenorhabditis elegans Hypothetical
protein C28H8.3 protein.
Length = 1714
Score = 29.1 bits (62), Expect = 2.2
Identities = 17/72 (23%), Positives = 32/72 (44%)
Frame = +1
Query: 334 LERPKSEMMKKLLAKNPILNVHIDQSTQREASTSAEVQTPMTDASKSAMHQPDIVNFDLK 513
L R + + K L K IL + S + + ++ + M+D +S +++NF L+
Sbjct: 26 LPRARQPSIAKSLEKVQILENSVAGSEKNASDDDSDASSVMSDDLESLGETTEVLNFSLE 85
Query: 514 PSEMKTKDYEDF 549
M K+ F
Sbjct: 86 QLSMMKKNLAQF 97
>Z93379-2|CAB07592.1| 170|Caenorhabditis elegans Hypothetical
protein F21H7.3 protein.
Length = 170
Score = 28.7 bits (61), Expect = 2.9
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -2
Query: 304 LSRPVYLCRSSSLFS 260
L RP+YLC+SS LFS
Sbjct: 112 LGRPIYLCKSSVLFS 126
>Z75527-4|CAA99779.2| 316|Caenorhabditis elegans Hypothetical
protein C15C8.4 protein.
Length = 316
Score = 28.3 bits (60), Expect = 3.9
Identities = 20/82 (24%), Positives = 35/82 (42%)
Frame = +1
Query: 184 WAPPDNDPPTQPNLTKLETTPTKYDEKITMNYDTNIPDDLKVSRSSYANSLERPKSEMMK 363
W+ N +Q L L + ++K+ + Y+ + D KV + + K
Sbjct: 132 WSQAQNGKFSQKELNALHGELKEVEQKMRV-YEDQLDDFKKVPHENSIQHDIESIGDKTK 190
Query: 364 KLLAKNPILNVHIDQSTQREAS 429
KL A N LN H+D+ ++ S
Sbjct: 191 KLKAANRELNDHLDEVHRKVTS 212
>DQ178236-1|ABA18178.1| 316|Caenorhabditis elegans putative low
density lipoproteinreceptor associated protein (37.4 kD)
protein.
Length = 316
Score = 28.3 bits (60), Expect = 3.9
Identities = 20/82 (24%), Positives = 35/82 (42%)
Frame = +1
Query: 184 WAPPDNDPPTQPNLTKLETTPTKYDEKITMNYDTNIPDDLKVSRSSYANSLERPKSEMMK 363
W+ N +Q L L + ++K+ + Y+ + D KV + + K
Sbjct: 132 WSQAQNGKFSQKELNALHGELKEVEQKMRV-YEDQLDDFKKVPHENSIQHDIESIGDKTK 190
Query: 364 KLLAKNPILNVHIDQSTQREAS 429
KL A N LN H+D+ ++ S
Sbjct: 191 KLKAANRELNDHLDEVHRKVTS 212
>AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical
protein W03F11.4 protein.
Length = 1406
Score = 28.3 bits (60), Expect = 3.9
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 145 YRNSLRPLQTVAPWAPPDNDPPTQPNLTKLETTP 246
Y ++ +PL T+ P PP+ P QP + TP
Sbjct: 815 YASNSQPLSTLPPPPPPNPPPAPQPPSSAASLTP 848
>U28940-3|AAD31556.1| 1212|Caenorhabditis elegans Transbilayer
amphipath transporters(subfamily iv p-type atpase)
protein 4, isoform a protein.
Length = 1212
Score = 27.9 bits (59), Expect = 5.1
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +1
Query: 196 DNDPPTQPNLTKLETTPTKYDEKITMNYDTNIPDDLKVSRSSYANSLERP 345
D+D ++P+ L TT ++D+++T+ + + P D +S + E P
Sbjct: 547 DDDDVSRPDELGLPTTSIQFDDRLTVIVEEDTPSDSPAPDASPRDLPETP 596
>U28940-1|AAD31557.1| 1454|Caenorhabditis elegans Transbilayer
amphipath transporters(subfamily iv p-type atpase)
protein 4, isoform b protein.
Length = 1454
Score = 27.9 bits (59), Expect = 5.1
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +1
Query: 196 DNDPPTQPNLTKLETTPTKYDEKITMNYDTNIPDDLKVSRSSYANSLERP 345
D+D ++P+ L TT ++D+++T+ + + P D +S + E P
Sbjct: 547 DDDDVSRPDELGLPTTSIQFDDRLTVIVEEDTPSDSPAPDASPRDLPETP 596
>Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical
protein B0393.4 protein.
Length = 803
Score = 27.5 bits (58), Expect = 6.8
Identities = 24/82 (29%), Positives = 36/82 (43%)
Frame = +1
Query: 148 RNSLRPLQTVAPWAPPDNDPPTQPNLTKLETTPTKYDEKITMNYDTNIPDDLKVSRSSYA 327
+N+ R L VA A P P +P+ +PT+ E I IP+ +++ ++
Sbjct: 27 KNARRQLLNVALTATPP--PSVEPS------SPTRPSEPIPPPLPEPIPELVQILLAAEP 78
Query: 328 NSLERPKSEMMKKLLAKNPILN 393
N PK KKL K P N
Sbjct: 79 NKPSVPKRSNRKKLTYKQPPRN 100
>AL033536-10|CAN86926.1| 345|Caenorhabditis elegans Hypothetical
protein Y53C10A.6b protein.
Length = 345
Score = 27.5 bits (58), Expect = 6.8
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = +1
Query: 304 KVSRSSYANSLERPKSEMMKKLLAKNPI-LNV-HIDQSTQREASTSAE 441
K SR + + E+P ++++++ L KNPI L+ I Q + +A+ S E
Sbjct: 22 KTSRMERSTTSEKPAADLIREYLLKNPIKLSPWSITQFFENDANVSEE 69
>AL033536-9|CAA22140.1| 344|Caenorhabditis elegans Hypothetical
protein Y53C10A.6a protein.
Length = 344
Score = 27.5 bits (58), Expect = 6.8
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = +1
Query: 304 KVSRSSYANSLERPKSEMMKKLLAKNPI-LNV-HIDQSTQREASTSAE 441
K SR + + E+P ++++++ L KNPI L+ I Q + +A+ S E
Sbjct: 22 KTSRMERSTTSEKPAADLIREYLLKNPIKLSPWSITQFFENDANVSEE 69
>AF067618-2|AAC19195.1| 920|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 266 protein.
Length = 920
Score = 27.5 bits (58), Expect = 6.8
Identities = 12/47 (25%), Positives = 25/47 (53%)
Frame = +1
Query: 358 MKKLLAKNPILNVHIDQSTQREASTSAEVQTPMTDASKSAMHQPDIV 498
+K+ LAKN + ++I +S AE++ P D ++ + D++
Sbjct: 126 LKENLAKNVLNKLNITESINTTGKPWAEIEQPAADLGRAILAARDVL 172
>Z68751-2|CAA92972.2| 193|Caenorhabditis elegans Hypothetical
protein T05E11.2 protein.
Length = 193
Score = 27.1 bits (57), Expect = 9.0
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 9/67 (13%)
Frame = -1
Query: 482 CMADFEASVIGVWTSALVEASLCVLWSMCTL--SIGFLASSFFII-------SDFGLSKL 330
C DFE + I + +++L L + +++CT+ S G LA S +I S F L+
Sbjct: 68 CFGDFELASIILISASLGCCILAICFAICTIFTSFGALAHSVVLIAAAMCSLSGF-LTYT 126
Query: 329 FAYELRD 309
+ YEL+D
Sbjct: 127 YYYELKD 133
>Z68161-9|CAA92298.2| 688|Caenorhabditis elegans Hypothetical
protein F20C5.5 protein.
Length = 688
Score = 27.1 bits (57), Expect = 9.0
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +1
Query: 310 SRSSYANSLERPKSEMMKKLLAKNPI--LNVHIDQSTQREASTSAEVQTPMTDASKSAMH 483
S+S + LE K +K++ + + +N + + STQ STS E Q + ++AM
Sbjct: 47 SKSKKTHFLEVDKFWTPEKIVRSSEVKRINKNTEISTQESTSTSTEYQFATLEDFQNAMA 106
Query: 484 QPD 492
+ D
Sbjct: 107 EKD 109
>Z50857-3|CAC42284.1| 753|Caenorhabditis elegans Hypothetical
protein F11A1.3a protein.
Length = 753
Score = 27.1 bits (57), Expect = 9.0
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +3
Query: 315 QFVREQLGETKIRDDEETARQKSYTQRTHRPEHAKRGFYQCRSPNADD 458
Q + + E + +E R+K T+R HR H+K PN+DD
Sbjct: 11 QSMEIETNENPDKVEEPVVRRKRVTRRRHRRIHSKNNC--LTPPNSDD 56
>U61945-5|AAB03128.1| 517|Caenorhabditis elegans Hypothetical
protein C49C8.1 protein.
Length = 517
Score = 27.1 bits (57), Expect = 9.0
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 351 RDDEETARQKSYTQRTHRPEHAKRGFYQCRSPNA 452
R EE + +T R RP RG +Q SPNA
Sbjct: 252 RTAEEKVDDEEFTFRRARPHTDFRGTFQYASPNA 285
>U39667-6|AAC69011.2| 640|Caenorhabditis elegans Disorganized
muscle protein 1,isoform a protein.
Length = 640
Score = 27.1 bits (57), Expect = 9.0
Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 5/87 (5%)
Frame = +1
Query: 304 KVSRSSYANSLERPKSEMMKKLLAKNPILNVHIDQSTQR-EASTSAEV---QTPMTDASK 471
K S Y L + + EM KKL AKN N + Q ++ STS EV M
Sbjct: 86 KPKHSEYFLRLMKTRQEMQKKLTAKNG-SNKSVQQYLRKLPPSTSKEVTIIPVKMKPDDN 144
Query: 472 SAMHQPDIVN-FDLKPSEMKTKDYEDF 549
S ++ + D K ++ TK+ E F
Sbjct: 145 SVYISKELSDRTDTKLPKVSTKEVEKF 171
>AY095447-1|AAM23316.1| 640|Caenorhabditis elegans DIM-1(L)
protein.
Length = 640
Score = 27.1 bits (57), Expect = 9.0
Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 5/87 (5%)
Frame = +1
Query: 304 KVSRSSYANSLERPKSEMMKKLLAKNPILNVHIDQSTQR-EASTSAEV---QTPMTDASK 471
K S Y L + + EM KKL AKN N + Q ++ STS EV M
Sbjct: 86 KPKHSEYFLRLMKTRQEMQKKLTAKNG-SNKSVQQYLRKLPPSTSKEVTIIPVKMKPDDN 144
Query: 472 SAMHQPDIVN-FDLKPSEMKTKDYEDF 549
S ++ + D K ++ TK+ E F
Sbjct: 145 SVYISKELSDRTDTKLPKVSTKEVEKF 171
>AF136238-1|AAD34462.1| 753|Caenorhabditis elegans DAF-12 A1
protein.
Length = 753
Score = 27.1 bits (57), Expect = 9.0
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +3
Query: 315 QFVREQLGETKIRDDEETARQKSYTQRTHRPEHAKRGFYQCRSPNADD 458
Q + + E + +E R+K T+R HR H+K PN+DD
Sbjct: 11 QSMEIETNENPDKVEEPVVRRKRVTRRRHRRIHSKNNC--LTPPNSDD 56
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +1
Query: 145 YRNSLRPLQTVAPWAPPDNDPPTQPNLTKLETTPT 249
++ LRP V+P PP PP P + T T
Sbjct: 129 HQQQLRPTTAVSPPKPPSFAPPVPPAAALITDTST 163
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +1
Query: 145 YRNSLRPLQTVAPWAPPDNDPPTQPNLTKLETTPT 249
++ LRP V+P PP PP P + T T
Sbjct: 351 HQQQLRPTTAVSPPKPPSFAPPVPPAAALITDTST 385
>AC006674-4|AAF39940.1| 402|Caenorhabditis elegans Hypothetical
protein K12H6.11 protein.
Length = 402
Score = 27.1 bits (57), Expect = 9.0
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -2
Query: 436 HW*KPLFACSGRC 398
+W +P+FACSG C
Sbjct: 168 YWDRPMFACSGSC 180
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,259,138
Number of Sequences: 27780
Number of extensions: 293509
Number of successful extensions: 1351
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1350
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1123720628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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