Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0661
         (578 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF506023-1|AAM46899.1|   76|Tribolium castaneum polyubiquitin pr...    46   2e-07
AF506022-1|AAM46898.1|  685|Tribolium castaneum polyubiquitin pr...    46   2e-07
AF506020-1|AAM46896.1|  112|Tribolium castaneum polyubiquitin pr...    39   4e-05
AF506021-1|AAM46897.1|   64|Tribolium castaneum polyubiquitin pr...    38   8e-05
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    23   1.9  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   4.3  
AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of act...    21   5.7  
AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity mod...    21   5.7  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   7.6  
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    21   7.6  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   7.6  

>AF506023-1|AAM46899.1|   76|Tribolium castaneum polyubiquitin
           protein.
          Length = 76

 Score = 46.0 bits (104), Expect = 2e-07
 Identities = 22/58 (37%), Positives = 34/58 (58%)
 Frame = +1

Query: 70  VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 243
           +E+E    I+ +K  +  K    P+Q  LIFAGK + D  TL  +NI+   T+HLV++
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72


>AF506022-1|AAM46898.1|  685|Tribolium castaneum polyubiquitin
           protein.
          Length = 685

 Score = 46.0 bits (104), Expect = 2e-07
 Identities = 22/58 (37%), Positives = 34/58 (58%)
 Frame = +1

Query: 70  VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 243
           +E+E    I+ +K  +  K    P+Q  LIFAGK + D  TL  +NI+   T+HLV++
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72



 Score = 46.0 bits (104), Expect = 2e-07
 Identities = 22/58 (37%), Positives = 34/58 (58%)
 Frame = +1

Query: 70  VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 243
           +E+E    I+ +K  +  K    P+Q  LIFAGK + D  TL  +NI+   T+HLV++
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148



 Score = 46.0 bits (104), Expect = 2e-07
 Identities = 22/58 (37%), Positives = 34/58 (58%)
 Frame = +1

Query: 70  VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 243
           +E+E    I+ +K  +  K    P+Q  LIFAGK + D  TL  +NI+   T+HLV++
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224



 Score = 46.0 bits (104), Expect = 2e-07
 Identities = 22/58 (37%), Positives = 34/58 (58%)
 Frame = +1

Query: 70  VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 243
           +E+E    I+ +K  +  K    P+Q  LIFAGK + D  TL  +NI+   T+HLV++
Sbjct: 243 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300



 Score = 46.0 bits (104), Expect = 2e-07
 Identities = 22/58 (37%), Positives = 34/58 (58%)
 Frame = +1

Query: 70  VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 243
           +E+E    I+ +K  +  K    P+Q  LIFAGK + D  TL  +NI+   T+HLV++
Sbjct: 319 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376



 Score = 46.0 bits (104), Expect = 2e-07
 Identities = 22/58 (37%), Positives = 34/58 (58%)
 Frame = +1

Query: 70  VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 243
           +E+E    I+ +K  +  K    P+Q  LIFAGK + D  TL  +NI+   T+HLV++
Sbjct: 471 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528



 Score = 46.0 bits (104), Expect = 2e-07
 Identities = 22/58 (37%), Positives = 34/58 (58%)
 Frame = +1

Query: 70  VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 243
           +E+E    I+ +K  +  K    P+Q  LIFAGK + D  TL  +NI+   T+HLV++
Sbjct: 547 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 604



 Score = 46.0 bits (104), Expect = 2e-07
 Identities = 22/58 (37%), Positives = 34/58 (58%)
 Frame = +1

Query: 70  VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 243
           +E+E    I+ +K  +  K    P+Q  LIFAGK + D  TL  +NI+   T+HLV++
Sbjct: 623 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 680



 Score = 43.6 bits (98), Expect = 1e-06
 Identities = 21/58 (36%), Positives = 33/58 (56%)
 Frame = +1

Query: 70  VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 243
           +E+E    I+ +K  +  K    P+Q   IFAGK + D  TL  +NI+   T+HLV++
Sbjct: 395 LEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452


>AF506020-1|AAM46896.1|  112|Tribolium castaneum polyubiquitin
           protein.
          Length = 112

 Score = 38.7 bits (86), Expect = 4e-05
 Identities = 18/43 (41%), Positives = 26/43 (60%)
 Frame = +1

Query: 115 LSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 243
           +  K    P+Q  LIFAGK + D  TL  +NI+   T+HLV++
Sbjct: 2   IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 44



 Score = 35.1 bits (77), Expect = 4e-04
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = +1

Query: 70  VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIK 213
           +E+E    I+ +K  +  K    P+Q   IFAGK + D  TL  +NI+
Sbjct: 63  LEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYNIQ 110


>AF506021-1|AAM46897.1|   64|Tribolium castaneum polyubiquitin
           protein.
          Length = 64

 Score = 37.5 bits (83), Expect = 8e-05
 Identities = 18/48 (37%), Positives = 27/48 (56%)
 Frame = +1

Query: 70  VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIK 213
           +E+E    I+ +K  +  K    P+Q  LIFAGK + D  TL  +NI+
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 62


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 479 SGSFIICCTNGLSKTCLSISGLD 411
           +GS ++C +NGL  T  S S L+
Sbjct: 49  AGSNLLCASNGLVTTLASGSSLN 71


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 362 PRPKLSRPASPPS 324
           PRP+ +RP S PS
Sbjct: 408 PRPEWARPPSTPS 420


>AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of
           activity of ets genes protein.
          Length = 108

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 103 LKEVLSSKFSTEPEQLCLIFAGKIMN 180
           L EV SS+F    + LCL+  G  ++
Sbjct: 57  LPEVPSSRFLMNGKALCLMSLGMFLS 82


>AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity
           modulator protein.
          Length = 108

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 103 LKEVLSSKFSTEPEQLCLIFAGKIMN 180
           L EV SS+F    + LCL+  G  ++
Sbjct: 57  LPEVPSSRFLMNGKALCLMSLGMFLS 82


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +1

Query: 370 TFMDLQARMQQELLSNPDMLRQVLDNPLV 456
           TF+DL +  Q + L+  D + +  D P++
Sbjct: 407 TFLDLWSDYQNKSLAAFDFVARNSDTPII 435


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +1

Query: 91  DIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQ 201
           D   LKE+L S   TE    CL+       D + LK+
Sbjct: 28  DNVNLKEILQSDRLTENYVNCLLEKKPCTPDGEELKR 64


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -2

Query: 91  RHLPQFQPAASLSGVLTVIVIFLGSSC 11
           +HLP+F  A       + I+  LG++C
Sbjct: 315 QHLPKFSAANFFDIERSTILSVLGTAC 341


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.316    0.131    0.363 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,806
Number of Sequences: 336
Number of extensions: 2881
Number of successful extensions: 22
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14412858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)