Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0661
(578 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 49 4e-07
SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein Ubi2|... 46 4e-06
SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein Ubi1|Schiz... 46 4e-06
SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein Ubi3|Schi... 46 4e-06
SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr 2|||M... 46 4e-06
SPAC589.10c |||ribomal-ubiquitin fusion protein Ubi5|Schizosacch... 46 4e-06
SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like pro... 40 3e-04
SPBC800.12c |||ubiquitin family protein, unknown|Schizosaccharom... 40 3e-04
SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces pomb... 37 0.002
SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomy... 34 0.013
SPBC31E1.03 |hub1|ubl4|ubiquitin-like protein modifier Hub1|Schi... 30 0.21
SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces ... 28 1.1
SPAC19B12.01 ||SPAC4F10.21|TPR repeat protein, TTC27 family|Schi... 28 1.1
SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory sub... 27 1.5
SPAC23C4.09c |||DNA-binding TFAR19-related protein|Schizosacchar... 27 2.0
SPAC16A10.03c |||zinc finger protein Pep5/Vps11 |Schizosaccharom... 27 2.0
SPAPB1A10.12c |alo1||D-arabinono-1,4-lactone oxidase|Schizosacch... 27 2.6
SPBC1683.04 |||glycosyl hydrolase family 3|Schizosaccharomyces p... 25 6.1
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 49.2 bits (112), Expect = 4e-07
Identities = 20/60 (33%), Positives = 39/60 (65%)
Frame = +1
Query: 58 EKQRVEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLV 237
+K V ++ ++ + LKE ++ E E+ LI+AG+++ D ++LK + I+DG ++HLV
Sbjct: 14 QKYAVTVDSESSVLALKEAIAPVADIEKERQRLIYAGRVLKDEESLKTYKIQDGHSIHLV 73
Score = 26.6 bits (56), Expect = 2.6
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 8/47 (17%)
Frame = +1
Query: 403 ELLSNPDMLRQVLDN--------PLVQQMMNDPENMRSLITSNPQMQ 519
E+ SNP ML ++++ P V+QMM PE R++ + Q
Sbjct: 159 EMFSNPQMLDMIINSSPHLRNAPPYVRQMMQSPEFRRAMTDPDTMRQ 205
>SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein
Ubi2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 46.0 bits (104), Expect = 4e-06
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +1
Query: 70 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 243
+E+E I +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 15 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72
>SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein
Ubi1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 46.0 bits (104), Expect = 4e-06
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +1
Query: 70 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 243
+E+E I +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 15 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72
>SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein
Ubi3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 46.0 bits (104), Expect = 4e-06
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +1
Query: 70 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 243
+E+E I +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 15 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72
>SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 382
Score = 46.0 bits (104), Expect = 4e-06
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +1
Query: 70 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 243
+E+E I +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 15 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72
Score = 46.0 bits (104), Expect = 4e-06
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +1
Query: 70 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 243
+E+E I +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 91 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 46.0 bits (104), Expect = 4e-06
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +1
Query: 70 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 243
+E+E I +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 167 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 46.0 bits (104), Expect = 4e-06
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +1
Query: 70 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 243
+E+E I +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 243 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 46.0 bits (104), Expect = 4e-06
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +1
Query: 70 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 243
+E+E I +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 319 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>SPAC589.10c |||ribomal-ubiquitin fusion protein
Ubi5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 46.0 bits (104), Expect = 4e-06
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +1
Query: 70 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 243
+E+E I +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 15 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72
>SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like
protein modifier Ned8|Schizosaccharomyces pombe|chr
2|||Manual
Length = 78
Score = 39.5 bits (88), Expect = 3e-04
Identities = 18/57 (31%), Positives = 33/57 (57%)
Frame = +1
Query: 70 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVI 240
++I+ + + R+KE + K P Q LI+AGK M D + ++++ G +HLV+
Sbjct: 15 LDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYHLEGGSVLHLVL 71
>SPBC800.12c |||ubiquitin family protein,
unknown|Schizosaccharomyces pombe|chr 2|||Manual
Length = 137
Score = 39.5 bits (88), Expect = 3e-04
Identities = 19/61 (31%), Positives = 36/61 (59%)
Frame = +1
Query: 43 LKPPKEKQRVEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGL 222
++PP ++ EI + I LKEVL+S+ ST+P + L++ GK + ++ L + D +
Sbjct: 65 VRPPIQQASTEINVQSTILELKEVLASQLSTQPSSIRLMYKGKPLVNSRLLDDYVDADSV 124
Query: 223 T 225
+
Sbjct: 125 S 125
>SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 368
Score = 36.7 bits (81), Expect = 0.002
Identities = 16/48 (33%), Positives = 31/48 (64%)
Frame = +1
Query: 73 EIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKD 216
++ D I LKE + ++ + E E+ LI++G+I+ D T+ ++NIK+
Sbjct: 17 DVSADTKISELKEKIQTQQNYEVERQKLIYSGRILADDKTVGEYNIKE 64
>SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 603
Score = 34.3 bits (75), Expect = 0.013
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = +1
Query: 73 EIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQ--HNIKDGLTVHLVI 240
++ + LKE+++ F ++L LI AG+++ + L++ H+ D +T HLVI
Sbjct: 19 QVPRTKTVLELKELIAVTFEAPADRLKLIHAGRVLRNETPLEEILHDATDLVTFHLVI 76
>SPBC31E1.03 |hub1|ubl4|ubiquitin-like protein modifier
Hub1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 73
Score = 30.3 bits (65), Expect = 0.21
Identities = 14/59 (23%), Positives = 32/59 (54%)
Frame = +1
Query: 58 EKQRVEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHL 234
+K RV+ D + K++++++ T+P ++ L + D TL + I DG+++ +
Sbjct: 12 KKVRVKCMPDDTVGDFKKLVAAQTGTDPRRIVLKKWHSVFKDNITLADYEIHDGMSLEM 70
>SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1502
Score = 27.9 bits (59), Expect = 1.1
Identities = 11/31 (35%), Positives = 22/31 (70%)
Frame = +1
Query: 427 LRQVLDNPLVQQMMNDPENMRSLITSNPQMQ 519
LR ++D+P + ++N+PE +++LI P+ Q
Sbjct: 1169 LRSIVDSPRKKIIVNNPEILQALIKLTPRNQ 1199
>SPAC19B12.01 ||SPAC4F10.21|TPR repeat protein, TTC27
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 817
Score = 27.9 bits (59), Expect = 1.1
Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Frame = +1
Query: 4 QRDKTTLKKLRSQLKPPKEKQRVEIEED----ADIKRLKEVLSSKFSTEPEQLCLIFAGK 171
Q T+ + + +L +++ +ED A + L +LSS+ P +L + A
Sbjct: 249 QNKSTSTQPITFELNDDTLLEKISFKEDQKSLAPSEELDPILSSEDPNHPSKLDPLDASL 308
Query: 172 IMNDADTLKQHNIKDGLT 225
++ +K +N DGLT
Sbjct: 309 LLAFCHIIKNNNPDDGLT 326
>SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory
subunit Ekc1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 838
Score = 27.5 bits (58), Expect = 1.5
Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Frame = +1
Query: 454 VQQMMNDPE---NMRSLITSNPQMQDLMSRNPEISHMLNNPELL 576
++ +++ PE N++ L+ N + + S NP++ L PE+L
Sbjct: 17 IEAILDKPEDEINLKELLEENGVLDECKSHNPKLLEYLCKPEVL 60
>SPAC23C4.09c |||DNA-binding TFAR19-related
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 131
Score = 27.1 bits (57), Expect = 2.0
Identities = 15/64 (23%), Positives = 33/64 (51%)
Frame = +1
Query: 385 QARMQQELLSNPDMLRQVLDNPLVQQMMNDPENMRSLITSNPQMQDLMSRNPEISHMLNN 564
Q +Q E+ N +L Q+L++P ++ + + ++ M++ +ISH ++
Sbjct: 37 QQEVQDEMRQN--LLSQILEHPARDRLRRIALVRKDRAEAVEELLLRMAKTGQISHKISE 94
Query: 565 PELL 576
PEL+
Sbjct: 95 PELI 98
>SPAC16A10.03c |||zinc finger protein Pep5/Vps11
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 860
Score = 27.1 bits (57), Expect = 2.0
Identities = 11/31 (35%), Positives = 23/31 (74%)
Frame = +1
Query: 403 ELLSNPDMLRQVLDNPLVQQMMNDPENMRSL 495
+LL + L++ D+ L+QQ+++DPE +++L
Sbjct: 654 DLLYSHLSLKEGQDDSLIQQIISDPETVKTL 684
>SPAPB1A10.12c |alo1||D-arabinono-1,4-lactone
oxidase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 461
Score = 26.6 bits (56), Expect = 2.6
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -3
Query: 219 PIFDVVLLQGIGIIHDFPGENKT*LFWFCTEF*RQHFF 106
P FD+V + + + D + K L W EF R H F
Sbjct: 193 PAFDLVATEDVTTVTDLFQDWKNNLIWESAEFVRVHVF 230
>SPBC1683.04 |||glycosyl hydrolase family 3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 832
Score = 25.4 bits (53), Expect = 6.1
Identities = 9/17 (52%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
Frame = -3
Query: 540 WISR-HEILHLWVGGDE 493
WIS H +LH+W G+E
Sbjct: 619 WISEAHTLLHIWYNGNE 635
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.131 0.363
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,364,845
Number of Sequences: 5004
Number of extensions: 45572
Number of successful extensions: 152
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 151
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 248115846
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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