Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0661
(578 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0) 46 2e-05
SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0) 46 2e-05
SB_59029| Best HMM Match : Pkinase (HMM E-Value=0) 38 0.006
SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037) 38 0.006
SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29) 38 0.008
SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10) 36 0.032
SB_57465| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.51
SB_45697| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.68
SB_24574| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.68
SB_13250| Best HMM Match : Toxin_22 (HMM E-Value=1.2) 29 3.6
SB_51209| Best HMM Match : UBX (HMM E-Value=0.5) 28 6.3
SB_46400| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_31174| Best HMM Match : LIM_bind (HMM E-Value=0) 28 6.3
SB_1398| Best HMM Match : fn3 (HMM E-Value=0.0034) 28 6.3
SB_3312| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_55194| Best HMM Match : Protamine_P1 (HMM E-Value=5.6) 27 8.4
SB_24816| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.4
SB_36388| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.4
SB_2793| Best HMM Match : UBX (HMM E-Value=0.32) 27 8.4
>SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 70 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 243
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 15 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72
>SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 70 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 243
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 15 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 70 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 243
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 91 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 70 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 243
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 70 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 243
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 243 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 70 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 243
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 319 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 70 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 243
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 395 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 70 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 243
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 471 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528
>SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 381
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 70 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 243
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 15 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 70 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 243
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 91 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 70 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 243
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 70 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 243
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 243 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 70 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 243
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 319 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 147
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 70 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 243
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 15 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/57 (22%), Positives = 31/57 (54%)
Frame = +1
Query: 70 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVI 240
+++E ++ +KE + ++ P+ L++ + + D +L +NIK G +HL +
Sbjct: 90 LDVEASDTVESVKEKIQNREGIPPKVQRLLYEEEELVDNRSLADYNIKQGSILHLFL 146
>SB_59029| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 1023
Score = 37.9 bits (84), Expect = 0.006
Identities = 21/61 (34%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Frame = +1
Query: 67 RVEIEEDADIKRLKEVLSS---KFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLV 237
+VEI ED + +LK+ + + K + + LI+AGKI+ND + LK++NI + V ++
Sbjct: 80 KVEIGEDETVLKLKQKIEADKGKDAYPHGNIKLIYAGKILNDDNPLKEYNIDEKSFVVIM 139
Query: 238 I 240
+
Sbjct: 140 V 140
>SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037)
Length = 150
Score = 37.9 bits (84), Expect = 0.006
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +1
Query: 139 PEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 243
P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 4 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 38
>SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29)
Length = 142
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +1
Query: 70 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIK 213
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+
Sbjct: 93 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 140
>SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10)
Length = 333
Score = 35.5 bits (78), Expect = 0.032
Identities = 15/50 (30%), Positives = 31/50 (62%)
Frame = +1
Query: 94 IKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 243
I +K ++ +K +Q L+F G++++D DT ++ I G T+HL+++
Sbjct: 94 IIEVKYLIEAKGGYPKDQQRLVFNGQVLSDEDTFEKVGIFAGATLHLIVR 143
>SB_57465| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 32.7 bits (71), Expect = 0.22
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +1
Query: 394 MQQELLSNPDMLRQVLDNPLVQQMMNDPENMRSLITSNPQMQDLMSRN 537
+ Q++ SNP ML+Q++ P +QQMM + SNP + S N
Sbjct: 4 LMQQMSSNPQMLQQMMQAPYMQQMMQQ-------MVSNPDLMSNKSAN 44
>SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1323
Score = 31.5 bits (68), Expect = 0.51
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +1
Query: 25 KKLRSQLKPPKEKQRVEIEEDADIKRLKEVLSSKFSTEPEQ 147
+K + K KEK+R + EDAD + K+ K + EPEQ
Sbjct: 39 EKKEKRKKMKKEKERKGVPEDADTEMKKKERKEKETFEPEQ 79
>SB_45697| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 734
Score = 31.1 bits (67), Expect = 0.68
Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Frame = +1
Query: 7 RDKTTLKKLRSQLKPPK---EKQRVEIEE-DADIKRLKEVLSSKFSTEPEQ 147
+ T +KKLR++ K +KQ +IEE D+++KR+ EVL+S+ + +Q
Sbjct: 385 QSNTIIKKLRAKEKENDALIKKQTKKIEELDSEVKRMTEVLTSRDDSHCKQ 435
>SB_24574| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 222
Score = 31.1 bits (67), Expect = 0.68
Identities = 16/53 (30%), Positives = 33/53 (62%), Gaps = 4/53 (7%)
Frame = +1
Query: 64 QRVEIEEDADIKRLK---EVLS-SKFSTEPEQLCLIFAGKIMNDADTLKQHNI 210
+R ++++A++K LK E+LS +++ PE L IFAG++ ++ K ++
Sbjct: 87 ERQRVKKEAEVKTLKDASEILSIGQYTPSPENLKAIFAGEVNTKSEIPKPKSV 139
>SB_13250| Best HMM Match : Toxin_22 (HMM E-Value=1.2)
Length = 376
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -3
Query: 396 HSSLEIHKSTLTKA-QAFKTRQPTQRV*TKWC 304
HS+ +I + ++T A + TRQPT R+ WC
Sbjct: 236 HSTTDITEISVTDALERTITRQPTSRILASWC 267
>SB_51209| Best HMM Match : UBX (HMM E-Value=0.5)
Length = 272
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +1
Query: 13 KTTLKKLRSQLKPPKEKQRVEIEEDADIKRLKEV 114
K LK+L + KEK R+ +EE+ ++ + +E+
Sbjct: 49 KEQLKQLEESSRIDKEKDRLRLEEEQELTKQEEI 82
>SB_46400| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 239
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = -1
Query: 533 LDMRSCICGLEVMRLRIFSGSFIICCTNGLSKTCLSISGLDRSSCCILAWRSIKVL*P 360
++MR I ++ + + F+ + C KTCL ++ D +C LA IK+ P
Sbjct: 44 VEMRDSIGRIKRLEIGEFAAAAAADCPARDVKTCLPLAARDIKTCLPLAAHDIKIRLP 101
>SB_31174| Best HMM Match : LIM_bind (HMM E-Value=0)
Length = 609
Score = 27.9 bits (59), Expect = 6.3
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = +1
Query: 409 LSNPDMLRQVLDNPLVQQMMNDPENMRSLITSNPQMQDLMSRN 537
+ +P ML QV N Q M N N L MQ+LMSR+
Sbjct: 487 MQDPGMLEQVSKNVTRQGMTNFTLNYLRLCVILEPMQELMSRH 529
>SB_1398| Best HMM Match : fn3 (HMM E-Value=0.0034)
Length = 2245
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +2
Query: 362 VRVLLWISRLECNRNFCPTLICSDKS*TIHWCSR 463
+RV LW L C R C CS K I WCS+
Sbjct: 462 IRVWLWYRLLLCIRIRCKPWWCSIK---IEWCSK 492
>SB_3312| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 769
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +1
Query: 13 KTTLKKLRSQLKPPKEKQRVEIEEDADIKRLKEV 114
K LK+L + KEK R+ +EE+ ++ + +E+
Sbjct: 242 KEQLKQLEESSRIDKEKDRLRLEEEQELTKQEEI 275
>SB_55194| Best HMM Match : Protamine_P1 (HMM E-Value=5.6)
Length = 203
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +1
Query: 457 QQMMNDPENMRSLITSN--PQMQDLMSRNPEISHMLNN 564
QQ MND N + + N ++ DL+SR P +S ++ +
Sbjct: 90 QQRMNDIMNRQRRVIMNLKKRVNDLLSRQPRVSSLMTD 127
>SB_24816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 662
Score = 27.5 bits (58), Expect = 8.4
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 1 WQRDKTTLKKLRSQLKPPKEKQRVEIEEDADIKRLKEVLSSKFSTEP 141
W R+ T+ +L +L PK K+R E A R+ + L S+ ST P
Sbjct: 557 WDREPGTMTRLMEELGWPKLKERREKARLAFFYRINKGL-SEISTPP 602
>SB_36388| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1570
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +2
Query: 239 LKLLQDQNRRVRLVD--PQLTSVLHHLV*TRWVGWRVLKAW 355
LKL+ D N+ +R + P ++ + V + +VG VLK+W
Sbjct: 1032 LKLVVDVNKHLRPISLTPAISKLAEEFVVSSYVGPAVLKSW 1072
>SB_2793| Best HMM Match : UBX (HMM E-Value=0.32)
Length = 311
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +1
Query: 13 KTTLKKLRSQLKPPKEKQRVEIEEDADIKRLKEV 114
K L++L K KEK R+ +EE+ ++ + +E+
Sbjct: 69 KEQLEQLEESSKIDKEKDRLRLEEEQELTKQEEI 102
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.316 0.131 0.363
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,883,885
Number of Sequences: 59808
Number of extensions: 363137
Number of successful extensions: 1109
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1108
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1385833362
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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