Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0660
         (368 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ302656-1|CAC35521.1|  385|Anopheles gambiae gSG1b protein prot...    24   2.1  
AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    23   4.8  
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    22   6.4  

>AJ302656-1|CAC35521.1|  385|Anopheles gambiae gSG1b protein
           protein.
          Length = 385

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +1

Query: 1   LTVGSGLALHLVLLKSMGNGNHSPSGGPYACLPTLAIKKK 120
           L V   L L LVL ++ G    +PSG  Y  +P   ++++
Sbjct: 5   LLVSCLLLLQLVLTQADGGSFLAPSGSNYCPIPLEVLEQE 44


>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +3

Query: 231 ICFSYINWSLYVLLRCILICQKYTVTIKTNND 326
           ICF+ +NW +  L+R   +C   + T++   D
Sbjct: 541 ICFNILNWCM--LVRSSNVCPYVSSTMEKTLD 570


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -2

Query: 43  SAIPGAEPSR 14
           S +PGAEPSR
Sbjct: 179 SGVPGAEPSR 188


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 374,495
Number of Sequences: 2352
Number of extensions: 6658
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 27944475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)