Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0660
         (368 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64843-11|AAL08038.1|  365|Caenorhabditis elegans Hypothetical p...    27   3.2  
U41007-21|AAK84502.1|  465|Caenorhabditis elegans Hypothetical p...    27   4.2  
U41007-20|AAA82275.1|  455|Caenorhabditis elegans Hypothetical p...    27   4.2  
U13645-6|AAV34802.1|  457|Caenorhabditis elegans Hypothetical pr...    27   4.2  
U13645-5|AAM15541.1|  425|Caenorhabditis elegans Hypothetical pr...    27   4.2  
U13645-4|AAA20986.2|  529|Caenorhabditis elegans Hypothetical pr...    27   4.2  
Z93785-2|CAB07859.2| 1335|Caenorhabditis elegans Hypothetical pr...    26   7.3  

>U64843-11|AAL08038.1|  365|Caenorhabditis elegans Hypothetical
           protein K06C4.17 protein.
          Length = 365

 Score = 27.5 bits (58), Expect = 3.2
 Identities = 11/45 (24%), Positives = 29/45 (64%)
 Frame = +2

Query: 185 LNRFSNVLIIQYGSWNMFLVYKLEFICFIKVYFNLSKVYRYNKNK 319
           + +++ + ++QY   N+F V+K+ F+ FI +  ++  + +Y+ N+
Sbjct: 219 VEKYTFLKVVQYVEENVFSVFKIFFLLFI-INVSIILLLKYSHNE 262


>U41007-21|AAK84502.1|  465|Caenorhabditis elegans Hypothetical
           protein C33H5.18b protein.
          Length = 465

 Score = 27.1 bits (57), Expect = 4.2
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +2

Query: 206 LIIQYGSWNMFLVYKLEFICFIKVYFNLSKVYR 304
           ++ +  +W MFLV+ ++F CF ++      VYR
Sbjct: 112 IVTRGATWLMFLVFLIQFKCFQEIISIGLAVYR 144


>U41007-20|AAA82275.1|  455|Caenorhabditis elegans Hypothetical
           protein C33H5.18a protein.
          Length = 455

 Score = 27.1 bits (57), Expect = 4.2
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +2

Query: 206 LIIQYGSWNMFLVYKLEFICFIKVYFNLSKVYR 304
           ++ +  +W MFLV+ ++F CF ++      VYR
Sbjct: 102 IVTRGATWLMFLVFLIQFKCFQEIISIGLAVYR 134


>U13645-6|AAV34802.1|  457|Caenorhabditis elegans Hypothetical
           protein C05D10.1c protein.
          Length = 457

 Score = 27.1 bits (57), Expect = 4.2
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +3

Query: 18  LGSAPGIAEVHGQR*PLAIRWAVCLSTYIG 107
           L  APG+ E HG    L + WA+ L + IG
Sbjct: 283 LERAPGLLEEHGGHVKLKLTWAMKLVSRIG 312


>U13645-5|AAM15541.1|  425|Caenorhabditis elegans Hypothetical
           protein C05D10.1b protein.
          Length = 425

 Score = 27.1 bits (57), Expect = 4.2
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +3

Query: 18  LGSAPGIAEVHGQR*PLAIRWAVCLSTYIG 107
           L  APG+ E HG    L + WA+ L + IG
Sbjct: 251 LERAPGLLEEHGGHVKLKLTWAMKLVSRIG 280


>U13645-4|AAA20986.2|  529|Caenorhabditis elegans Hypothetical
           protein C05D10.1a protein.
          Length = 529

 Score = 27.1 bits (57), Expect = 4.2
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +3

Query: 18  LGSAPGIAEVHGQR*PLAIRWAVCLSTYIG 107
           L  APG+ E HG    L + WA+ L + IG
Sbjct: 355 LERAPGLLEEHGGHVKLKLTWAMKLVSRIG 384


>Z93785-2|CAB07859.2| 1335|Caenorhabditis elegans Hypothetical protein
            W09D10.2 protein.
          Length = 1335

 Score = 26.2 bits (55), Expect = 7.3
 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 4/33 (12%)
 Frame = +2

Query: 179  MVLNRFSNVLIIQYGS----WNMFLVYKLEFIC 265
            +++N F   L +QY +    W+MFL   L FIC
Sbjct: 1186 IIVNTFHLALFVQYWTWPMFWSMFLSVLLFFIC 1218


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,202,949
Number of Sequences: 27780
Number of extensions: 159618
Number of successful extensions: 350
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 349
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 524900642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)