Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0660
(368 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g78900.1 68414.m09198 vacuolar ATP synthase catalytic subunit... 27 5.2
At1g63110.3 68414.m07131 cell division cycle protein-related con... 27 5.2
At1g63110.2 68414.m07132 cell division cycle protein-related con... 27 5.2
At1g63110.1 68414.m07130 cell division cycle protein-related con... 27 5.2
At1g32200.2 68414.m03961 glycerol-3-phosphate acyltransferase, c... 27 5.2
At1g32200.1 68414.m03960 glycerol-3-phosphate acyltransferase, c... 27 5.2
At2g17210.1 68415.m01987 pentatricopeptide (PPR) repeat-containi... 26 9.0
At1g25530.1 68414.m03170 lysine and histidine specific transport... 26 9.0
>At1g78900.1 68414.m09198 vacuolar ATP synthase catalytic subunit A
/ V-ATPase A subunit / vacuolar proton pump alpha
subunit / V-ATPase 69 kDa subunit identical to SP|O23654
Vacuolar ATP synthase catalytic subunit A (EC 3.6.3.14)
(V-ATPase A subunit) (Vacuolar proton pump alpha
subunit) (V-ATPase 69 kDa subunit) {Arabidopsis
thaliana}
Length = 623
Score = 26.6 bits (56), Expect = 5.2
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 7/45 (15%)
Frame = -3
Query: 288 KLKYTLIKHINSNLYTRNI---FQDPY----CIIKTFENLFSTMN 175
K+ YTLIKH +L+ R + F+DP +++ F+ L+ +N
Sbjct: 568 KITYTLIKHRLGDLFYRLVSQKFEDPAEGEDTLVEKFKKLYDDLN 612
>At1g63110.3 68414.m07131 cell division cycle protein-related
contains 9 transmembrane domains; similar to PIG-U
(GI:27372215) [Rattus norvegicus]; similar to Cell
division cycle protein 91-like 1 (CDC91-like 1 protein)
(PIG-U) (Swiss-Prot:Q9H490) [Homo sapiens]
Length = 407
Score = 26.6 bits (56), Expect = 5.2
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 237 FSYINWSLYVLLRCILICQKY 299
F + WSLYVL+ C L KY
Sbjct: 206 FWVLLWSLYVLILCALSLNKY 226
>At1g63110.2 68414.m07132 cell division cycle protein-related
contains 9 transmembrane domains; similar to PIG-U
(GI:27372215) [Rattus norvegicus]; similar to Cell
division cycle protein 91-like 1 (CDC91-like 1 protein)
(PIG-U) (Swiss-Prot:Q9H490) [Homo sapiens]
Length = 397
Score = 26.6 bits (56), Expect = 5.2
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 237 FSYINWSLYVLLRCILICQKY 299
F + WSLYVL+ C L KY
Sbjct: 196 FWVLLWSLYVLILCALSLNKY 216
>At1g63110.1 68414.m07130 cell division cycle protein-related
contains 9 transmembrane domains; similar to PIG-U
(GI:27372215) [Rattus norvegicus]; similar to Cell
division cycle protein 91-like 1 (CDC91-like 1 protein)
(PIG-U) (Swiss-Prot:Q9H490) [Homo sapiens]
Length = 469
Score = 26.6 bits (56), Expect = 5.2
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 237 FSYINWSLYVLLRCILICQKY 299
F + WSLYVL+ C L KY
Sbjct: 268 FWVLLWSLYVLILCALSLNKY 288
>At1g32200.2 68414.m03961 glycerol-3-phosphate acyltransferase,
chloroplast (ATS1) identical to SP|Q43307|PLSB_ARATH
Glycerol-3-phosphate acyltransferase, chloroplast
precursor (EC 2.3.1.15) (GPAT) (ATS1) {Arabidopsis
thaliana}; contains Pfam profile PF01553:
Acyltransferase
Length = 459
Score = 26.6 bits (56), Expect = 5.2
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -1
Query: 98 GRQAYGPPDGEWLPLPMDFSN 36
GR P GEW P P D S+
Sbjct: 324 GRDRPNPSTGEWFPAPFDASS 344
>At1g32200.1 68414.m03960 glycerol-3-phosphate acyltransferase,
chloroplast (ATS1) identical to SP|Q43307|PLSB_ARATH
Glycerol-3-phosphate acyltransferase, chloroplast
precursor (EC 2.3.1.15) (GPAT) (ATS1) {Arabidopsis
thaliana}; contains Pfam profile PF01553:
Acyltransferase
Length = 459
Score = 26.6 bits (56), Expect = 5.2
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -1
Query: 98 GRQAYGPPDGEWLPLPMDFSN 36
GR P GEW P P D S+
Sbjct: 324 GRDRPNPSTGEWFPAPFDASS 344
>At2g17210.1 68415.m01987 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 715
Score = 25.8 bits (54), Expect = 9.0
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +1
Query: 31 LVLLKSMGNGNHSPSGGPYACLPTLAIKKKKLLSCVEKNLNL 156
L++ KSM +H PS Y+C+ + + ++ + VE NL
Sbjct: 548 LMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNL 589
>At1g25530.1 68414.m03170 lysine and histidine specific transporter,
putative similar to lysine and histidine specific
transporter GI:2576361 from [Arabidopsis thaliana];
contains Pfam profile PF01490: Transmembrane amino acid
transporter protein
Length = 440
Score = 25.8 bits (54), Expect = 9.0
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -1
Query: 104 NVGRQAYGPPDGEWLPLP 51
++GR A+GP G W+ LP
Sbjct: 98 DLGRYAFGPKLGPWIVLP 115
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,518,364
Number of Sequences: 28952
Number of extensions: 138884
Number of successful extensions: 345
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 345
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 487896136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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