Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0658
(607 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 281 7e-75
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 257 1e-67
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 239 3e-62
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 231 7e-60
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 228 7e-59
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 185 6e-46
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 185 6e-46
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 150 3e-35
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 149 4e-35
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 141 1e-32
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 138 1e-31
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 134 2e-30
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 131 1e-29
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 129 6e-29
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 124 2e-27
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 124 2e-27
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 123 3e-27
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 123 3e-27
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 122 5e-27
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 116 4e-25
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 114 2e-24
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 113 2e-24
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 112 5e-24
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 109 4e-23
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 108 1e-22
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 107 2e-22
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 107 3e-22
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 105 8e-22
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 101 1e-20
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 98 2e-19
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 95 9e-19
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 89 1e-16
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 87 2e-16
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 85 1e-15
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 84 2e-15
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 75 1e-12
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 66 5e-10
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 66 6e-10
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 65 1e-09
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 65 1e-09
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 63 4e-09
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 59 9e-08
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 59 9e-08
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 59 9e-08
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 58 1e-07
UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n... 58 2e-07
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 57 4e-07
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 56 5e-07
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 56 5e-07
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 56 5e-07
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 56 7e-07
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 55 1e-06
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 55 1e-06
UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2; Mycoplas... 55 2e-06
UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n... 54 2e-06
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 54 2e-06
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 53 6e-06
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 50 4e-05
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 50 6e-05
UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;... 48 1e-04
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 48 1e-04
UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3; Bacteria... 48 2e-04
UniRef50_Q7MTN0 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 48 2e-04
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 48 2e-04
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 47 3e-04
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 46 5e-04
UniRef50_A0CLK5 Cluster: Chromosome undetermined scaffold_20, wh... 45 0.002
UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9; Firmicut... 45 0.002
UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11; Bacteri... 44 0.002
UniRef50_A4S3U8 Cluster: Predicted protein; n=2; Ostreococcus|Re... 44 0.003
UniRef50_Q4FLN5 Cluster: 30S ribosomal protein S5; n=4; Ricketts... 44 0.003
UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1; ... 44 0.004
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 44 0.004
UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep... 44 0.004
UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondr... 42 0.009
UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1; N... 41 0.020
UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7; Chlamydi... 41 0.020
UniRef50_Q7R438 Cluster: GLP_254_52826_53383; n=1; Giardia lambl... 40 0.035
UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1; Neoricke... 40 0.035
UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1; ... 40 0.046
UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;... 39 0.080
UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1; ... 39 0.080
UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis gr... 38 0.24
UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1; ... 37 0.32
UniRef50_Q8CJM4 Cluster: Putative uncharacterized protein SCO658... 35 1.3
UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium falciparu... 35 1.7
UniRef50_A6S1U3 Cluster: Putative uncharacterized protein; n=2; ... 35 1.7
UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial... 35 1.7
UniRef50_UPI0000F2DE4B Cluster: PREDICTED: similar to thioredoxi... 33 4.0
UniRef50_Q1III4 Cluster: Molybdenum cofactor synthesis-like; n=1... 33 4.0
UniRef50_Q9RS86 Cluster: Ribosomal protein S2-related protein; n... 33 5.2
UniRef50_Q01BF6 Cluster: COG0457: FOG: TPR repeat; n=2; Ostreoco... 33 5.2
UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella ve... 33 5.2
UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila pseudoobscu... 33 6.9
UniRef50_Q12FM3 Cluster: Phage integrase; n=2; Proteobacteria|Re... 32 9.2
UniRef50_Q01TB9 Cluster: Putative uncharacterized protein precur... 32 9.2
UniRef50_Q9MTD9 Cluster: Ribosomal protein S5; n=1; Toxoplasma g... 32 9.2
UniRef50_Q4WLB1 Cluster: CDF zinc transporter (Msc2), putaitve; ... 32 9.2
UniRef50_Q9NQ11 Cluster: Probable cation-transporting ATPase 13A... 32 9.2
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 281 bits (690), Expect = 7e-75
Identities = 132/151 (87%), Positives = 140/151 (92%)
Frame = +3
Query: 153 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 332
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQ
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQ 113
Query: 333 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 512
KQTRAGQRTRFKAFVAIGD NGH+GLGVKCSKEVATAIRGAIILAKLS++PVRRGYWGNK
Sbjct: 114 KQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNK 173
Query: 513 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
IGKPHTVPCKVTG+CGSV VRLIPAPRGTGI
Sbjct: 174 IGKPHTVPCKVTGRCGSVLVRLIPAPRGTGI 204
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 257 bits (630), Expect = 1e-67
Identities = 111/151 (73%), Positives = 138/151 (91%)
Frame = +3
Query: 153 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 332
++++KEWVPVTKLGRLV+ GKI +E IYL+SLPIKE++I+D+FL P LNDEV+K++PVQ
Sbjct: 28 RDEEKEWVPVTKLGRLVKAGKIKSIEEIYLYSLPIKEYQIVDYFL-PRLNDEVMKVVPVQ 86
Query: 333 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 512
KQTRAGQRTRFKAFV IGD++GH+GLG+KC+KEVATAIRGAII+ KLS++P+RRGYWG
Sbjct: 87 KQTRAGQRTRFKAFVVIGDSDGHVGLGIKCAKEVATAIRGAIIMGKLSIMPIRRGYWGTA 146
Query: 513 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
+G PHTVP KV+GKCGSVTVRL+PAPRG G+
Sbjct: 147 LGDPHTVPVKVSGKCGSVTVRLVPAPRGAGL 177
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 239 bits (586), Expect = 3e-62
Identities = 114/139 (82%), Positives = 121/139 (87%)
Frame = +3
Query: 174 VPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQ 353
+PVTKLG L+ + KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQKQT AGQ
Sbjct: 1 MPVTKLGHLINDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTCAGQ 60
Query: 354 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 533
TRFKAFV IGD NGH+GL VKCSKEVATAIRGAIILAKLS++PV RGYWGNKIGKPHTV
Sbjct: 61 HTRFKAFVPIGDYNGHVGLSVKCSKEVATAIRGAIILAKLSIVPVCRGYWGNKIGKPHTV 120
Query: 534 PCKVTGKCGSVTVRLIPAP 590
PCKVTG+C SV V LIPAP
Sbjct: 121 PCKVTGRCSSVLVHLIPAP 139
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 231 bits (566), Expect = 7e-60
Identities = 105/150 (70%), Positives = 127/150 (84%)
Frame = +3
Query: 156 EDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQK 335
+D+ WVP TKLGRLV++GKI LE I+LFSLPIKE +I++ F+G L DEV+KI PVQK
Sbjct: 45 DDKDVWVPCTKLGRLVQQGKIKSLEHIFLFSLPIKEHQIVEHFIGGELKDEVMKICPVQK 104
Query: 336 QTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKI 515
QT AGQR RFKAFV +GD NGHIGLGVK KEVA +I+G++ILAKL+++PVRRGYWG+K+
Sbjct: 105 QTTAGQRMRFKAFVVVGDCNGHIGLGVKACKEVAHSIQGSMILAKLNIVPVRRGYWGSKL 164
Query: 516 GKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
G+PHT+P KV GKCGSV VRLIPAPRG GI
Sbjct: 165 GEPHTIPTKVHGKCGSVHVRLIPAPRGAGI 194
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 228 bits (558), Expect = 7e-59
Identities = 104/149 (69%), Positives = 125/149 (83%)
Frame = +3
Query: 159 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQ 338
++K WVPVTKLGRLV+ GKI +E I+L SLP+KEF+IID L P L DEV+ I PVQKQ
Sbjct: 31 EEKGWVPVTKLGRLVKAGKITTIEEIFLHSLPVKEFQIIDTLL-PGLQDEVMNIKPVQKQ 89
Query: 339 TRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIG 518
TRAGQRTRFKA V +GD+NGH+GLG+K +KEVA AIR II+AKLSV+P+RRGYWG +G
Sbjct: 90 TRAGQRTRFKAVVVVGDSNGHVGLGIKTAKEVAGAIRAGIIIAKLSVIPIRRGYWGTNLG 149
Query: 519 KPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
+PH++ K TGKCGSVTVRLIPAPRG+GI
Sbjct: 150 QPHSLATKTTGKCGSVTVRLIPAPRGSGI 178
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 185 bits (451), Expect = 6e-46
Identities = 87/101 (86%), Positives = 93/101 (92%)
Frame = +3
Query: 303 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 482
DEVLKIMPVQKQT AGQRTRF AFVAIGD NGH GLGVKCSKEVATAIR AIILAKLS++
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEVATAIREAIILAKLSIV 107
Query: 483 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
P+R+GYWGNKIGKP+TVPCKVTG CGSV V LIPAPRGTG+
Sbjct: 108 PLRQGYWGNKIGKPNTVPCKVTGHCGSVLVCLIPAPRGTGM 148
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 185 bits (451), Expect = 6e-46
Identities = 86/151 (56%), Positives = 109/151 (72%)
Frame = +3
Query: 153 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 332
++++ EW+P T +GRLV+ KI LE I+ FS I+E EI+D G S+ +EVL I VQ
Sbjct: 15 RKEESEWIPKTAVGRLVKMLKITSLEQIFKFSHVIREPEIVDLLCGNSIKEEVLSIKSVQ 74
Query: 333 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 512
KQTRAGQ+TR KA V +GD GH+G+G K SKE A+AIRGAI AK ++ PVR G W
Sbjct: 75 KQTRAGQKTRIKAVVVVGDRKGHVGIGTKASKEAASAIRGAIARAKCAIRPVRLGLWDGA 134
Query: 513 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
GKPHTV CK +GKCG+ V++IPAPRGTGI
Sbjct: 135 QGKPHTVSCKGSGKCGTSVVQVIPAPRGTGI 165
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 150 bits (363), Expect = 3e-35
Identities = 71/86 (82%), Positives = 76/86 (88%)
Frame = +3
Query: 153 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 332
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQ
Sbjct: 29 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQ 88
Query: 333 KQTRAGQRTRFKAFVAIGDNNGHIGL 410
KQTRAGQRTRFKAFVAIGD NGH+GL
Sbjct: 89 KQTRAGQRTRFKAFVAIGDYNGHVGL 114
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 149 bits (362), Expect = 4e-35
Identities = 68/83 (81%), Positives = 75/83 (90%)
Frame = +3
Query: 354 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 533
+ RFKAFVAIGD+NG +G GVKCSKE ATAIRGA+ILAKLS+LPV RGYWGN+I KPHTV
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVKCSKEAATAIRGAVILAKLSILPVPRGYWGNEIRKPHTV 120
Query: 534 PCKVTGKCGSVTVRLIPAPRGTG 602
P KVTG+CGSV VRLIPAPRGTG
Sbjct: 121 PGKVTGRCGSVLVRLIPAPRGTG 143
Score = 33.5 bits (73), Expect = 4.0
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +3
Query: 159 DQKEWVPVTKLGRLVREGKI 218
+ KEW+PVT LGRLV++ KI
Sbjct: 43 EDKEWIPVTGLGRLVKDMKI 62
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 141 bits (341), Expect = 1e-32
Identities = 83/143 (58%), Positives = 98/143 (68%)
Frame = +3
Query: 177 PVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQR 356
P +KLG LV++ +I L IYLFSLPIKE EIID FLG +L DEVLK +P QK TR GQ
Sbjct: 51 PASKLGCLVKD-EIKSLGEIYLFSLPIKETEIIDIFLGAALKDEVLKSLPEQKGTRVGQ- 108
Query: 357 TRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVP 536
+KA GD NGH+ G+ EVA I+ IIL KL ++PV RGY G+K KPHTV
Sbjct: 109 -YYKA----GDYNGHVITGL---DEVANTIQRVIILTKLPIVPVWRGYCGSKTSKPHTVL 160
Query: 537 CKVTGKCGSVTVRLIPAPRGTGI 605
CKVTG GSV++ LIPAPR T I
Sbjct: 161 CKVTGH-GSVSLHLIPAPRDTVI 182
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 138 bits (333), Expect = 1e-31
Identities = 69/149 (46%), Positives = 102/149 (68%), Gaps = 2/149 (1%)
Frame = +3
Query: 165 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTR 344
+EW P T +G LV+EGKI ++ ++ +LPI E EI+D L P L EV+ I VQKQT
Sbjct: 11 EEWKPRTSIGSLVKEGKISSIKELFDRNLPITEPEIVDVLL-PKLKYEVVDIKVVQKQTD 69
Query: 345 AGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGNKIG 518
AG+ +R+K V +G+ +G++ +G +K++ AI+ AI AK++++PVRR G W G
Sbjct: 70 AGEISRYKVLVIMGNMDGYVSIGTGKAKQLRVAIQKAIRDAKMNIIPVRRGCGSWQCTCG 129
Query: 519 KPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
+PH++P KV GK GSV V L+PAP+GTG+
Sbjct: 130 EPHSLPFKVVGKAGSVEVDLLPAPKGTGL 158
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 134 bits (323), Expect = 2e-30
Identities = 68/153 (44%), Positives = 98/153 (64%), Gaps = 2/153 (1%)
Frame = +3
Query: 153 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 332
K + + W P T++GR+V+EG I + I LP+ E EI+D L P L ++VL + VQ
Sbjct: 10 KFNTEAWEPKTQIGRMVKEGTISDISYIMDKGLPLLEPEIVDALL-PDLEEQVLDVKLVQ 68
Query: 333 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVR--RGYWG 506
+ ++G+R R++A V +G+ NG++G+G+ SKEV AIR AI AKLS++ VR G W
Sbjct: 69 RMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAIRKAIAHAKLSLIKVRVGCGSWE 128
Query: 507 NKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
G PH++P G CGSV V L+PAPRG G+
Sbjct: 129 CGCGSPHSIPFTAKGACGSVKVELLPAPRGVGL 161
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 131 bits (317), Expect = 1e-29
Identities = 64/149 (42%), Positives = 95/149 (63%), Gaps = 2/149 (1%)
Frame = +3
Query: 165 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTR 344
+EW P T+LGRLV G+I + LP+KE++I+D+ + P L DEV+ I Q+ T
Sbjct: 3 EEWTPRTELGRLVANGEIKTISEALHSKLPLKEYQIVDYLI-PDLKDEVINIERAQRMTD 61
Query: 345 AGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGNKIG 518
+G+R + +G+ NG++G+G +KE A AI+ AI AKL+++ ++R G W G
Sbjct: 62 SGRRMNYSITAVVGNGNGYVGVGRGKAKEAAPAIKKAIDNAKLNIIEIKRGCGSWECGCG 121
Query: 519 KPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
KPHT+P V GK GSV+V L PAP+G G+
Sbjct: 122 KPHTLPFLVNGKSGSVSVTLKPAPQGVGL 150
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 129 bits (311), Expect = 6e-29
Identities = 70/152 (46%), Positives = 95/152 (62%), Gaps = 6/152 (3%)
Frame = +3
Query: 168 EWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLN----DEVLKIMPVQK 335
EW P TKLG +V+EG+I + I+ IKE EIID L P +N EVL I +
Sbjct: 15 EWEPKTKLGMMVKEGQITDIHEIFRRGYQIKEPEIIDVLL-PEVNARENQEVLDIALTVR 73
Query: 336 QTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGN 509
T +G+R RF+ A+G+ +G++GLG+ KEV AIR AI AKL+++ ++R G W
Sbjct: 74 MTDSGRRVRFRVLAAVGNRDGYVGLGIGHGKEVGIAIRKAINYAKLNIIEIKRGCGSWEC 133
Query: 510 KIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
+ +PH+VP V GK GSV VRLIP PRG G+
Sbjct: 134 RCRRPHSVPFAVEGKEGSVRVRLIPGPRGLGL 165
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 124 bits (298), Expect = 2e-27
Identities = 71/147 (48%), Positives = 92/147 (62%)
Frame = +3
Query: 162 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQT 341
+ +W+P+TKLG LV+E KI LE IY FSL + + F P+ KQT
Sbjct: 51 EDKWLPITKLGCLVKEMKIKSLEEIYFFSLLSRNLRSLTFSWEH----------PLIKQT 100
Query: 342 RAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGK 521
Q+TRFKA V +G + GH+ LG+K S EVA IILAKLS++PV G ++ +
Sbjct: 101 CTDQQTRFKASVTVG-SYGHVSLGIKYSMEVA------IILAKLSIIPVETATGGKRL-E 152
Query: 522 PHTVPCKVTGKCGSVTVRLIPAPRGTG 602
PH VPC+VTG+CGS+ V LIPAPRGTG
Sbjct: 153 PHMVPCRVTGRCGSLLVHLIPAPRGTG 179
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 124 bits (298), Expect = 2e-27
Identities = 59/72 (81%), Positives = 63/72 (87%)
Frame = +3
Query: 153 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 332
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQ
Sbjct: 54 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQ 113
Query: 333 KQTRAGQRTRFK 368
KQTRAGQRTRFK
Sbjct: 114 KQTRAGQRTRFK 125
Score = 46.4 bits (105), Expect = 5e-04
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +3
Query: 540 KVTGKCGSVTVRLIPAPRGTGI 605
KVTG+CGSV VRLIPAPRGTGI
Sbjct: 125 KVTGRCGSVLVRLIPAPRGTGI 146
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 123 bits (297), Expect = 3e-27
Identities = 59/96 (61%), Positives = 78/96 (81%)
Frame = +3
Query: 162 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQT 341
++EWVP+TKLGRLV+ GKI LE+I+ FS+PIKE++I+D FL +L +E L I PVQKQT
Sbjct: 61 EQEWVPLTKLGRLVKGGKIKSLETIFQFSIPIKEYQIVDHFL-KTLKEEPLAIGPVQKQT 119
Query: 342 RAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 449
AGQ+TRFKA+V +GD++ HIGLG K +KEV AI+
Sbjct: 120 CAGQKTRFKAYVVVGDSHQHIGLGWKSAKEVQGAIQ 155
Score = 38.7 bits (86), Expect = 0.11
Identities = 19/47 (40%), Positives = 23/47 (48%)
Frame = +2
Query: 464 C*AVSSTSPKRLLG*QDRKATHRPLQGHRQVWFRNSPADSCPSWYWY 604
C +S KR+LG QDR TH P+Q R+ S S YWY
Sbjct: 163 CQTQFDSSQKRILGKQDRLTTHSPMQSDRKGRISQSQIGSSTQRYWY 209
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 123 bits (297), Expect = 3e-27
Identities = 65/147 (44%), Positives = 91/147 (61%), Gaps = 2/147 (1%)
Frame = +3
Query: 171 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAG 350
W P T+LG+ V EG+ID ++ LP+KE E++D + P L DEVL I VQ+ T +G
Sbjct: 7 WEPRTRLGKQVVEGEIDSMQEALNSGLPLKESEVVDQLV-PDLEDEVLDINMVQRMTDSG 65
Query: 351 QRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGNKIGKP 524
+R +F+ VA+G+ +G IG +V AI+ AI +AKL+++ V R G W G+P
Sbjct: 66 RRVKFRCVVAVGNRDGLIGYAEGRDDQVGGAIQKAIDIAKLNIIDVSRGCGSWECGCGRP 125
Query: 525 HTVPCKVTGKCGSVTVRLIPAPRGTGI 605
HTV + GK GSV V L PAPRG G+
Sbjct: 126 HTVALRTEGKAGSVEVELQPAPRGLGL 152
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 122 bits (295), Expect = 5e-27
Identities = 68/151 (45%), Positives = 92/151 (60%), Gaps = 2/151 (1%)
Frame = +3
Query: 159 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQ 338
+++ WVP T LG+ V G+I LE I L I+E II L P L EV+ + +QK
Sbjct: 42 EEEVWVPKTILGQKVASGEISSLEEIIELGLRIQEAGIIKKLL-PDLKSEVVDVGIIQKM 100
Query: 339 TRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGNK 512
T GQ TRFKA VA G+ NG++G+G SK++ AI A A L+V P++ G W +
Sbjct: 101 TSNGQSTRFKAIVATGNENGYLGIGQGKSKQMRIAIEKATNAAYLNVNPIKMGCGSWECR 160
Query: 513 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
+ H+VP KV GK GSVT+ +IPAPRG G+
Sbjct: 161 CDQKHSVPFKVKGKGGSVTIEIIPAPRGLGL 191
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 116 bits (279), Expect = 4e-25
Identities = 62/147 (42%), Positives = 91/147 (61%), Gaps = 2/147 (1%)
Frame = +3
Query: 171 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAG 350
W P T+LGR V+ G I +E LP+KE EI+D L P L DEVL I VQ+ T +G
Sbjct: 58 WEPRTRLGRKVQNGDISSMEQALDSGLPLKEAEIVDQLL-PGLEDEVLDINMVQRMTDSG 116
Query: 351 QRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGNKIGKP 524
+R +F+ VA+G+ +G++G +V AI+ AI +AKL+++ V R G W ++ G
Sbjct: 117 RRVKFRCVVAVGNRDGYLGYAQARDDQVGGAIQKAIDVAKLNIIEVDRGSGSWEDQPGGT 176
Query: 525 HTVPCKVTGKCGSVTVRLIPAPRGTGI 605
+++ K GK GSVTV + PAP+G G+
Sbjct: 177 NSLTRKAEGKAGSVTVEIQPAPQGLGL 203
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 114 bits (274), Expect = 2e-24
Identities = 59/138 (42%), Positives = 87/138 (63%), Gaps = 2/138 (1%)
Frame = +3
Query: 198 LVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFV 377
+V +GKI E LPI+E EI+D L P L+D+VL + +Q+ T +G+R RF
Sbjct: 1 MVADGKILSYEEALATGLPIREVEIVDALL-PGLDDDVLAVNMIQRMTDSGRRVRFNVLC 59
Query: 378 AIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGNKIGKPHTVPCKVTG 551
+G+++G++GL + KEVA+ IR AI AKL+++PV R G W + G +VP K+TG
Sbjct: 60 VVGNSDGYVGLAICKGKEVASTIRKAIDKAKLNMIPVMRGNGSWESGGGPGTSVPLKITG 119
Query: 552 KCGSVTVRLIPAPRGTGI 605
+ GS V L+PAP G G+
Sbjct: 120 RSGSTRVTLMPAPAGKGL 137
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 113 bits (273), Expect = 2e-24
Identities = 64/151 (42%), Positives = 89/151 (58%), Gaps = 2/151 (1%)
Frame = +3
Query: 159 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQ 338
++ WVP T LG+ V G+I LE I I+E II L P L EV+ + +QK
Sbjct: 23 EEAPWVPKTALGKRVNAGEITSLEEIQEAGARIQESGIIKKLL-PDLKTEVVDVGIIQKM 81
Query: 339 TRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGNK 512
T GQ TRFKA VA G+ NG++G+G +K++ AI A A L+V P++ G W +
Sbjct: 82 TSNGQSTRFKAIVAAGNENGYLGIGQGKAKQMRIAIEKANNQALLNVGPIKLGCGSWECR 141
Query: 513 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
+ H+VP KV GK GSV + ++PAPRG G+
Sbjct: 142 CDQKHSVPFKVRGKGGSVVIEILPAPRGLGL 172
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 112 bits (270), Expect = 5e-24
Identities = 66/162 (40%), Positives = 93/162 (57%), Gaps = 15/162 (9%)
Frame = +3
Query: 165 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPV----- 329
+EW P TKLGRLV+EGKI ++ I I+E EI+D L P+L E +K +
Sbjct: 5 EEWQPKTKLGRLVKEGKITNIDEILSNKYVIREPEIVDVLL-PNLEVEFMKWRIIRGKFR 63
Query: 330 --------QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLP 485
QK+T G +TR++ +GD +GH+G+G+ S ++ A AI AKL+++
Sbjct: 64 SKKPYRMAQKKTAEGNKTRYEVIAIVGDKDGHVGVGLGRSSDLLIAREKAINRAKLNIIK 123
Query: 486 VRR--GYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
V R G W G PH++P +V GK GSV V L PAP+G GI
Sbjct: 124 VARGCGSWECACGAPHSIPYQVEGKSGSVRVILKPAPKGVGI 165
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 109 bits (263), Expect = 4e-23
Identities = 53/72 (73%), Positives = 58/72 (80%)
Frame = +3
Query: 153 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 332
K + KEW+P TKLG LV++ KI LE IYLFSLPIK EIIDFFLG SL +EVLK MPVQ
Sbjct: 54 KAEDKEWIPFTKLGHLVKDMKIKSLEEIYLFSLPIKGSEIIDFFLGASLKNEVLKTMPVQ 113
Query: 333 KQTRAGQRTRFK 368
KQTRAGQ TRFK
Sbjct: 114 KQTRAGQWTRFK 125
Score = 41.5 bits (93), Expect = 0.015
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +3
Query: 540 KVTGKCGSVTVRLIPAPRGTGI 605
KVTG+CGSV VRL APRGTGI
Sbjct: 125 KVTGRCGSVLVRLFSAPRGTGI 146
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 108 bits (259), Expect = 1e-22
Identities = 53/65 (81%), Positives = 56/65 (86%)
Frame = +3
Query: 213 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 392
KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPV+K+TRAGQRTRFKAFVAI D
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDY 61
Query: 393 NGHIG 407
NG+ G
Sbjct: 62 NGYAG 66
Score = 45.6 bits (103), Expect = 0.001
Identities = 25/55 (45%), Positives = 30/55 (54%)
Frame = +2
Query: 386 RQQRSYWFGCEVQQGSRHCHSRRYYPC*AVSSTSPKRLLG*QDRKATHRPLQGHR 550
R Y EV QG H R ++P A+ +RLLG QDR+A HRPLQG R
Sbjct: 59 RDYNGYAGRVEVLQGGGRRHPRGHHPDQALHCHRAQRLLGEQDRQAPHRPLQGDR 113
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 107 bits (258), Expect = 2e-22
Identities = 58/131 (44%), Positives = 84/131 (64%)
Frame = -3
Query: 545 DLARDGVWLSYLVTPVTSSDW*N*QLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCL 366
+LA GV + LVTPV S+ N QL +D+S ++G G FLAAL QT++ V V +G++ L
Sbjct: 18 NLAGHGVGFTDLVTPVASTHRNNGQLGQDDSPTDGGGHFLAALDAQTDVAVAVTDGDEGL 77
Query: 365 ETCALSGTCLFLYRHDLKNLIIQGRAEEEINDLEFFDW*RKQVNALEFVDFSFANKTAEF 186
E L+GT L L HDL++ ++Q A+EEI+DLE F+ R QV+ L+ D + A++ +
Sbjct: 78 EARTLTGTGLLLDGHDLQHFVLQRAAQEEIDDLELFNGQRVQVDLLQGADLAIAHQATQL 137
Query: 185 GDRNPLFLVFL 153
G NP VFL
Sbjct: 138 GHWNPFLRVFL 148
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 107 bits (256), Expect = 3e-22
Identities = 62/151 (41%), Positives = 94/151 (62%), Gaps = 2/151 (1%)
Frame = -3
Query: 605 NTSTTRGRNQPDCYGTTLAGDLARDGVWLSYLVTPVTSSDW*N*QLSKDNSASNGSGDFL 426
+T T+ NQ + GTTL L GV L+ + TPVTSSDW N QL D++ S+G+ +FL
Sbjct: 79 DTGTSWSWNQSNGNGTTLTRGLGSQGVRLTQVGTPVTSSDWDNGQLGDDDTGSDGTSNFL 138
Query: 425 AALHTQTNMTVVVANGNKCLETCALSGTCLFLYRHDLKNLIIQGRAEEEINDLEFFDW*R 246
+ L+TQT++TV V N + LE+ +L+ + L L R D+ N I+Q ++ +NDLEF DW R
Sbjct: 139 SGLNTQTDVTVGVTNDDDSLESGSLTSSGLLLDRLDVHNFILQ-VWQQLVNDLEFLDWQR 197
Query: 245 KQVNALEFVDFSFANKTAEFGDRNP--LFLV 159
Q + + D + +++ + G+ NP FLV
Sbjct: 198 VQEDFFDGRDLAGLHQSTQLGNWNPTLFFLV 228
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 105 bits (252), Expect = 8e-22
Identities = 49/127 (38%), Positives = 82/127 (64%)
Frame = +3
Query: 225 LESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHI 404
L+ ++L + ++++ G SL +V++ + V + T++G++ + K V +GD +GH+
Sbjct: 84 LDYLFLKRIFFHNNKLVNILFGKSLKYKVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHV 143
Query: 405 GLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIP 584
GLGVK S + I+ A+ AKL++ +RRGYW + GKP+T+ K +GK GSV V + P
Sbjct: 144 GLGVKSSMDSKAGIKAALRKAKLAITKIRRGYWEIEEGKPNTIKYKTSGKAGSVVVCIKP 203
Query: 585 APRGTGI 605
AP+GTGI
Sbjct: 204 APKGTGI 210
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 101 bits (242), Expect = 1e-20
Identities = 70/151 (46%), Positives = 83/151 (54%), Gaps = 1/151 (0%)
Frame = +3
Query: 153 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 332
K + K WV + LG LV+E KI LES FS +II+FFLG L DEVL+ M Q
Sbjct: 18 KAEDKAWVFINNLGCLVKE-KIKSLESCSPFS----SSDIIEFFLGEHLKDEVLRTMLAQ 72
Query: 333 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 512
Q RTR K F + + L V CSKEV TA + AI L + + GY GNK
Sbjct: 73 NQ-----RTRIKVFFFLTIRSPMTTL-VNCSKEVGTAAQRAITLLSF-LFSTQTGYKGNK 125
Query: 513 IGKPHTVPCKVTG-KCGSVTVRLIPAPRGTG 602
IG PHT+PC VT + V V L APRGTG
Sbjct: 126 IGNPHTIPCDVTATEKNLVLVCLTTAPRGTG 156
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 97.9 bits (233), Expect = 2e-19
Identities = 56/110 (50%), Positives = 69/110 (62%)
Frame = +3
Query: 276 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 455
D L ++ + ++I +K+T AGQ+TRFKAFV D NGH+ L EVATAIRGA
Sbjct: 1 DMSLLAAVKGKGIRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSL------EVATAIRGA 54
Query: 456 IILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
IIL + S+ G+ GNKI KPHTV C+VT SV V I APRGT I
Sbjct: 55 IILDRSSIAIAWGGWSGNKIAKPHTVSCRVTRLYCSVLVHHISAPRGTDI 104
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 95.5 bits (227), Expect = 9e-19
Identities = 65/127 (51%), Positives = 80/127 (62%), Gaps = 1/127 (0%)
Frame = +3
Query: 174 VPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQ 353
+PVTKLG LV++ KI L P+KEFEI DFFL SL D+VLKI+P+ + R Q
Sbjct: 1 IPVTKLGCLVKDIKIKYL--------PVKEFEINDFFLEASLKDKVLKIIPLSR-FRNDQ 51
Query: 354 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL-SVLPVRRGYWGNKIGKPHT 530
TRF +F I + GH G+GVKCSK+V TA+ + + L S LP R Y GN I KP T
Sbjct: 52 WTRFNSFDTI-NYGGHNGIGVKCSKKVGTAVGLSSWSSFLSSCLP--RDYCGNNIRKP-T 107
Query: 531 VPCKVTG 551
PCK TG
Sbjct: 108 YPCKRTG 114
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 88.6 bits (210), Expect = 1e-16
Identities = 46/93 (49%), Positives = 64/93 (68%)
Frame = +3
Query: 201 VREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVA 380
V++ K+ L+ +YLFSLPIKEFE+ DF LG L D+VLK+M VQKQ +AG+R RFK V
Sbjct: 132 VKDMKMKSLK-VYLFSLPIKEFEVTDFLLGVPLKDKVLKLMFVQKQPKAGRRIRFKVIVT 190
Query: 381 IGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 479
I D N ++ LGV+ KE+ A+ +L+ + V
Sbjct: 191 IRDCNDNVSLGVEWPKELLIAVCRTNVLSIILV 223
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 87.4 bits (207), Expect = 2e-16
Identities = 46/92 (50%), Positives = 56/92 (60%)
Frame = +3
Query: 330 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGN 509
QKQT+ GQ+ R K F GD NGH+GLG+KCSKEVATA +G + +L
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKEVATAFQGLWVKMQLG---------ET 51
Query: 510 KIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
++ + V KVT GSV V LIPAPRGTGI
Sbjct: 52 RLSRSTLVQYKVTSHYGSVLVHLIPAPRGTGI 83
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 85.0 bits (201), Expect = 1e-15
Identities = 41/78 (52%), Positives = 55/78 (70%)
Frame = +3
Query: 177 PVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQR 356
PVTKLGRLV++GK+ ++ I+ F + IKE++I+D L L +EV+ I VQKQT G+
Sbjct: 36 PVTKLGRLVKDGKVKSIDQIFEFGIKIKEYQIVDHLLS-RLKEEVMTIDQVQKQTSRGKE 94
Query: 357 TRFKAFVAIGDNNGHIGL 410
R KA VAIGD+NGH L
Sbjct: 95 PRLKASVAIGDHNGHRAL 112
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 84.2 bits (199), Expect = 2e-15
Identities = 66/145 (45%), Positives = 80/145 (55%)
Frame = +3
Query: 159 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQ 338
+ K+W+PV KL LVR + L FSL K+ II FFL SL DE IMPVQ Q
Sbjct: 59 EDKQWMPVIKLCHLVRTWRYRDLP----FSLLNKKSMIIGFFLRTSLRDE---IMPVQTQ 111
Query: 339 TRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIG 518
T R FK FV+I D + H+ L KCSK+ ATAI VL V +G ++G
Sbjct: 112 TWLPSRP-FKDFVSIRDYSSHVDLDDKCSKKTATAI----------VL-VWKGTRETRLG 159
Query: 519 KPHTVPCKVTGKCGSVTVRLIPAPR 593
TV CKVTG+C SV + LIP R
Sbjct: 160 S-LTVSCKVTGQCVSVLICLIPPTR 183
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 74.9 bits (176), Expect = 1e-12
Identities = 42/84 (50%), Positives = 54/84 (64%)
Frame = +3
Query: 213 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 392
KI L+ +YLFS PIKEFE+ DF L L D+VLK+M V+KQ AG+ RFK V I
Sbjct: 2 KIKSLK-VYLFSRPIKEFEVTDFLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYC 60
Query: 393 NGHIGLGVKCSKEVATAIRGAIIL 464
N ++ LGV+ KE+ A+ IIL
Sbjct: 61 NDNVSLGVERPKELLIAVCRTIIL 84
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 66.5 bits (155), Expect = 5e-10
Identities = 39/104 (37%), Positives = 58/104 (55%)
Frame = +3
Query: 294 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 473
+ + V+KI + K T+ G+ RF A V IGD NG +G G+ S EV AI+ AI A
Sbjct: 48 NFEERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANN 107
Query: 474 SVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
+++ V++ K ++ V G+ G+ V L+PAP GTGI
Sbjct: 108 NLIKVKQ-------TKKGSIYHDVNGRHGAAKVMLLPAPEGTGI 144
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 66.1 bits (154), Expect = 6e-10
Identities = 36/106 (33%), Positives = 60/106 (56%)
Frame = +3
Query: 288 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 467
GP ++VL++ + K + G+ F+A VA+GD NG IGLG +KEV A+ A + A
Sbjct: 68 GPRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGCASAKEVMVAVEKASMEA 127
Query: 468 KLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
K + + V I K +++P ++ + G+ +V + PA GTG+
Sbjct: 128 KKTAITV-------PITKDYSLPHRLDVEWGAASVMMKPASVGTGL 166
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 64.9 bits (151), Expect = 1e-09
Identities = 37/103 (35%), Positives = 58/103 (56%)
Frame = +3
Query: 297 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 476
L ++++ + + K T+ G+ RF A IGD G++G G+ S EV AIR A+ AK +
Sbjct: 78 LEEKIVGVKKISKTTKGGRNMRFSALAVIGDRKGNVGFGLGKSIEVPVAIRKALKSAKNN 137
Query: 477 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
+ V K+ K T+ +V GK G+ V + PAP+GTG+
Sbjct: 138 MYKV-------KMNKNFTLYHEVIGKHGAGKVLIKPAPKGTGV 173
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 64.9 bits (151), Expect = 1e-09
Identities = 36/101 (35%), Positives = 56/101 (55%)
Frame = +3
Query: 303 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 482
+++LKI V K T+ G+ F A+GD G IGLG+ + V AIR AI AK +++
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRKAIAAAKKNIV 70
Query: 483 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
+ K +T+P ++ GK G+ T+ + PA GTG+
Sbjct: 71 KISL--------KNNTIPHEIAGKWGATTLWMAPAYEGTGV 103
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 63.3 bits (147), Expect = 4e-09
Identities = 37/103 (35%), Positives = 58/103 (56%)
Frame = +3
Query: 297 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 476
L + V+ + V K + G+R RF A V +GD NGH+G G ++EV AI+ A+ AK +
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIKKAVDDAKKN 71
Query: 477 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
++ V +G T+P ++ G+ GS V + PA GTG+
Sbjct: 72 LISV------PIVGT--TIPHEIHGQFGSGNVLMKPAAEGTGV 106
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 58.8 bits (136), Expect = 9e-08
Identities = 33/110 (30%), Positives = 59/110 (53%)
Frame = +3
Query: 276 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 455
DF G + + ++++ V K + G+ F+ IG+ NG +G+G + +EVATA++ A
Sbjct: 506 DFDDGENWQERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQAGREVATAVKRA 565
Query: 456 IILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
++ AK SV+ V + T+P +V K + ++PA GTG+
Sbjct: 566 LVDAKKSVVRV-------PLVGAGTIPHRVEAKFNAARCVMVPAADGTGV 608
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 58.8 bits (136), Expect = 9e-08
Identities = 38/105 (36%), Positives = 53/105 (50%)
Frame = +3
Query: 291 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 470
P L ++V+KI + K + G R RF A V +GD G IG +KE+ AI+ A+ AK
Sbjct: 13 PLLEEKVVKINRITKVVKGGARFRFSALVVVGDKKGQIGFATAKAKEIVEAIKKALEKAK 72
Query: 471 LSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
+ VR G T+P G+ G+ L PA +GTGI
Sbjct: 73 KQL--VRIPITGT------TIPHDTIGRFGASKFFLKPASKGTGI 109
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 58.8 bits (136), Expect = 9e-08
Identities = 37/102 (36%), Positives = 54/102 (52%)
Frame = +3
Query: 300 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 479
+++V+KI V K + G+R F A +GD G +G+G + EV AIR +I AK +
Sbjct: 31 SEKVVKIDRVAKVVKGGRRFSFNALSVVGDQRGKVGIGFGKANEVPDAIRKSIESAKKHL 90
Query: 480 LPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
+ + K HT+P +V GK S V L P+ GTGI
Sbjct: 91 VKIN--------FKGHTIPHEVIGKFKSARVILKPSTAGTGI 124
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 58.4 bits (135), Expect = 1e-07
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +3
Query: 153 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 260
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIK
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIK 89
>UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000502977 UniRef100 entry -
Rattus norvegicus
Length = 140
Score = 58.0 bits (134), Expect = 2e-07
Identities = 27/34 (79%), Positives = 27/34 (79%)
Frame = +3
Query: 504 GNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
GNKIGK H V CKVTG CGSV V LIPA RGTGI
Sbjct: 7 GNKIGKTHIVLCKVTGCCGSVLVHLIPAHRGTGI 40
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 56.8 bits (131), Expect = 4e-07
Identities = 31/101 (30%), Positives = 56/101 (55%)
Frame = +3
Query: 303 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 482
+ V+++ V K + G++ +F+A V +GD G++G+G +KEV A++ + I A+ +++
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIV 208
Query: 483 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
V + K T P + G G+ V L PA GTG+
Sbjct: 209 QV-------PMTKYSTFPHRSEGDYGAAKVMLRPASPGTGV 242
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 56.4 bits (130), Expect = 5e-07
Identities = 22/38 (57%), Positives = 30/38 (78%)
Frame = +3
Query: 171 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFF 284
W PVTKLGRLV++GK+ ++ I+ F + IKEFEI+D F
Sbjct: 35 WTPVTKLGRLVKDGKVKSIDQIFEFGIKIKEFEIVDHF 72
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 56.4 bits (130), Expect = 5e-07
Identities = 37/108 (34%), Positives = 55/108 (50%)
Frame = +3
Query: 282 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAII 461
F ++V+ I V K T+ G+ RF A V +GD G +GLG + EV AI+ A+
Sbjct: 38 FQKDDFEEKVVTIRRVTKVTKGGRHFRFAAVVVVGDKKGQVGLGTGKANEVPEAIKKAVK 97
Query: 462 LAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
AK +++ V + TVP +V G G+ V + PA GTG+
Sbjct: 98 EAKKNLIRVPL--------RGTTVPHEVIGHFGAGQVLIKPAKPGTGV 137
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 56.4 bits (130), Expect = 5e-07
Identities = 29/101 (28%), Positives = 57/101 (56%)
Frame = +3
Query: 303 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 482
+ V++I V K + G++ F+A + +GD NG +G+GV + +V A++ + A+ +++
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGVGKANDVIGAVKKGVSDARKALI 127
Query: 483 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
V + K +++P ++G G+ V L PA GTG+
Sbjct: 128 RV-------PLNKINSIPHPMSGSSGAANVFLKPASGGTGV 161
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 56.0 bits (129), Expect = 7e-07
Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Frame = +3
Query: 303 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV- 479
+++++I K T+ G+ F+ +G+ NG +GLG+ ++EV AIR AI AK ++
Sbjct: 17 EKIIEIRRTSKVTKGGKNLSFRVVAIVGNKNGKVGLGIGKAREVPEAIRKAISAAKRNIV 76
Query: 480 -LPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
+PV G T+P +V G+ + V L PA GTGI
Sbjct: 77 EVPVING----------TIPHEVIGRQDASKVLLKPAAPGTGI 109
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 55.2 bits (127), Expect = 1e-06
Identities = 31/101 (30%), Positives = 54/101 (53%)
Frame = +3
Query: 303 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 482
+ V+++ V K + G++ F+A V +GD G +G+GV +KEV A++ + A+ +++
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKEVIAAVQKSATNARRNII 245
Query: 483 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
V + K T P + G G+ V L PA GTG+
Sbjct: 246 TV-------PMTKYLTFPHRADGDYGAAKVMLRPASPGTGV 279
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 55.2 bits (127), Expect = 1e-06
Identities = 34/103 (33%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Frame = +3
Query: 303 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 482
+++L + K + G+R RF A V +GD NG +G+G+ +KEV AI A +A+ +++
Sbjct: 19 EKMLFVNRTSKTYQGGRRFRFAALVILGDRNGRVGMGIGKAKEVPVAIEKAKAVARKNMI 78
Query: 483 --PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
PV G T+P ++ G+ + V L PA GTG+
Sbjct: 79 TVPVENG----------TIPHEIVGENSTSRVLLKPAGPGTGV 111
>UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
pneumoniae
Length = 219
Score = 54.8 bits (126), Expect = 2e-06
Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Frame = +3
Query: 303 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA--KLS 476
+ ++K+ + K T+ G+ RF V +G+ G IG G+ + EV AI+ AI A L
Sbjct: 68 ERIVKLKRISKTTKGGRNMRFSVLVVVGNRKGKIGYGIAKALEVPNAIKKAIKAAHNSLH 127
Query: 477 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
+ + +G ++ +V G+ G+ V L PAP+GTGI
Sbjct: 128 TIEIHKG----------SIYHEVIGRSGASRVLLKPAPQGTGI 160
>UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n=1;
Mus musculus|Rep: UPI000056598D UniRef100 entry - Mus
musculus
Length = 239
Score = 54.4 bits (125), Expect = 2e-06
Identities = 48/143 (33%), Positives = 65/143 (45%), Gaps = 3/143 (2%)
Frame = +3
Query: 171 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAG 350
W+ +T L L + KI E + LF P K I F G SL D+++ + + +
Sbjct: 34 WLQITTLYGLFKNMKIKSQEEVCLFCCPSKSLFTITDFPGESLKDDLMMASGLGSRLLSS 93
Query: 351 QRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL-SVLPVRRGYWGNKIGK-- 521
QRT+ GH GL CS EVATAI+ I + L S P+ R GN GK
Sbjct: 94 QRTK-----------GHSGLSSMCSGEVATAIQVLGITSYLGSPWPLCRE--GNMTGKSL 140
Query: 522 PHTVPCKVTGKCGSVTVRLIPAP 590
P P ++ S+ LI AP
Sbjct: 141 PSVCPMQIRDYHSSMLACLITAP 163
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 54.4 bits (125), Expect = 2e-06
Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Frame = +3
Query: 297 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 476
L + ++ + T+ G+R F V +GD GH+G G +KEV AI I AK +
Sbjct: 28 LEERLIYANRTARVTKGGRRFSFSTLVVVGDRKGHVGFGHGKAKEVTLAIAKGIEKAKKN 87
Query: 477 VL--PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
V+ P+ G TVP V G G+ + ++PA RGTG+
Sbjct: 88 VIRVPIVDG----------TVPHDVIGTFGATKIIVLPARRGTGV 122
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 52.8 bits (121), Expect = 6e-06
Identities = 30/101 (29%), Positives = 55/101 (54%)
Frame = +3
Query: 303 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 482
+ ++KI V K T+ G++ F+A V IGD NG +G+GV +++V A + A + +++
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDVVNAFKKAKTDGRKNLI 87
Query: 483 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
V I K ++P V G G+ + + P+ G+G+
Sbjct: 88 DV-------PITKSLSIPHAVIGDLGACKIIMRPSIEGSGV 121
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 50.0 bits (114), Expect = 4e-05
Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 2/108 (1%)
Frame = +3
Query: 288 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 467
G L ++++ I V K + G+R F A V +GD G +G G ++EV AI A A
Sbjct: 56 GEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREVPEAISKATAAA 115
Query: 468 KLSVL--PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
K +++ P+R G + G+ G+ G+ V L AP GTGI
Sbjct: 116 KKTMIRVPLREGRTLHHDGR---------GRFGAGLVYLRSAPSGTGI 154
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 49.6 bits (113), Expect = 6e-05
Identities = 37/106 (34%), Positives = 49/106 (46%)
Frame = +3
Query: 288 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 467
G L D V+ I V K + G+ F A V +GD NG +G+G S+EV AI + A
Sbjct: 42 GDELLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREVPAAIAKGQLDA 101
Query: 468 KLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
K + V R T+ V G + TV L PA GTG+
Sbjct: 102 KKHMFSVPR--------VRGTITHPVQGHDAAGTVLLRPAAPGTGV 139
>UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YGL123C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 76
Score = 48.4 bits (110), Expect = 1e-04
Identities = 29/51 (56%), Positives = 33/51 (64%)
Frame = -1
Query: 310 TSSFRDGPRKKSMISNSLIGKENK*MLSSLSIFPSRTRRPSLVTGTHSFWS 158
TSS + G K SMI NSL GKE K + S + I P+ T PSLVTGTH F S
Sbjct: 4 TSSCKPG-NKVSMIWNSLTGKECKKISSMVVILPALTNLPSLVTGTHPFSS 53
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 48.4 bits (110), Expect = 1e-04
Identities = 36/101 (35%), Positives = 49/101 (48%)
Frame = +3
Query: 303 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 482
+ V+ I V K + G+R F A V +GD NG +G+G +KEV AI + A+ S
Sbjct: 44 ERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVPAAIAKGVEEARKSFF 103
Query: 483 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
V IG T P V G+ + V L PA GTG+
Sbjct: 104 RV------PLIGGTITHP--VQGEAAAGVVLLRPASPGTGV 136
>UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3;
Bacteria|Rep: 30S ribosomal protein S5 - Rhodopirellula
baltica
Length = 177
Score = 47.6 bits (108), Expect = 2e-04
Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
Frame = +3
Query: 285 LGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 464
L L D V+KI + G+R F A V +G+ +G +G G + EV +++ A
Sbjct: 17 LEAGLLDRVVKIKRCAAVVKGGRRFSFAAMVVVGNGSGQVGWGYGKANEVPPSVQKAQKQ 76
Query: 465 AKLSVL--PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
A S++ P+ G ++P +V G+ G+ V LIPA GTGI
Sbjct: 77 ASRSMIHVPLVEG----------SIPHQVWGRYGAARVVLIPAGAGTGI 115
>UniRef50_Q7MTN0 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 172
Score = 47.6 bits (108), Expect = 2e-04
Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Frame = +3
Query: 297 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 476
L D ++ I V K T+ G+ F A V +G+ +G IG G+ + EV AI + AK +
Sbjct: 16 LKDRLVAINRVTKVTKGGRTFTFAAIVVVGNEDGVIGWGLGKAGEVPAAIAKGVEAAKKN 75
Query: 477 VL--PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
++ PV G T+P + G +V L PA GTG+
Sbjct: 76 LIRVPVHNG----------TIPHEQAASYGGASVFLKPATTGTGV 110
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 47.6 bits (108), Expect = 2e-04
Identities = 33/103 (32%), Positives = 51/103 (49%)
Frame = +3
Query: 297 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 476
L ++++ I V K + G+R F A V +GD NG +G G+ + +V AIR + A+
Sbjct: 16 LIEKIVFINRVAKVVKGGRRFSFSAIVVVGDGNGKVGYGLGKANQVPEAIRKGVERARKD 75
Query: 477 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
+ V + PH +V G G+ V L PA GTG+
Sbjct: 76 MALVSL----TDVSIPH----QVIGHYGAGRVFLRPASAGTGL 110
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 47.2 bits (107), Expect = 3e-04
Identities = 37/103 (35%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Frame = +3
Query: 303 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LS 476
D+++ I V K + G+R F A V +GD G +G G ++EV AIR A AK L
Sbjct: 24 DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKATEAAKRDLI 83
Query: 477 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
+P+R G T+ V G+ G+ V L A GTGI
Sbjct: 84 FVPLRGG---------RTLHHDVHGRHGAGKVLLRSAKPGTGI 117
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 46.4 bits (105), Expect = 5e-04
Identities = 27/101 (26%), Positives = 50/101 (49%)
Frame = +3
Query: 303 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 482
+ V++I V K + G++ F+A V +G+ G +G+GV + +V A+R + K ++
Sbjct: 19 ERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGVGKAGDVIGAVRKGVADGKKQLI 78
Query: 483 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
V + K +++ G G V + PA GTG+
Sbjct: 79 EV-------PLTKSNSITHITNGVSGGAKVVVRPAAPGTGV 112
>UniRef50_A0CLK5 Cluster: Chromosome undetermined scaffold_20, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_20,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 337
Score = 44.8 bits (101), Expect = 0.002
Identities = 24/78 (30%), Positives = 39/78 (50%)
Frame = +3
Query: 363 FKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCK 542
F+ + IG+ NG IG G K+ TA+R A + A+ +++P+ W HT P
Sbjct: 187 FRQLIFIGNGNGVIGYGKGKGKDFETALRRAKVDAQRNLVPISLDLW-------HTCPIP 239
Query: 543 VTGKCGSVTVRLIPAPRG 596
+TG+ + + P P G
Sbjct: 240 LTGRFNDAEIEINPRPLG 257
>UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9;
Firmicutes|Rep: 30S ribosomal protein S5 - Mycoplasma
mobile
Length = 243
Score = 44.8 bits (101), Expect = 0.002
Identities = 32/101 (31%), Positives = 50/101 (49%)
Frame = +3
Query: 303 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 482
++++ I V + G+R F A V +GD G +G G + EV AI+ A+ A+ +++
Sbjct: 91 EKIVNIARVTNVVKGGRRFSFAAVVVVGDKKGRVGYGHGKALEVPDAIKKAVKDAQNNLI 150
Query: 483 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
V I TVP + K + V L PAP+G GI
Sbjct: 151 RV-------PIINKSTVPHEQWAKFLASKVMLKPAPKGKGI 184
>UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11;
Bacteria|Rep: 30S ribosomal protein S5 - Nitrosomonas
europaea
Length = 177
Score = 44.4 bits (100), Expect = 0.002
Identities = 31/103 (30%), Positives = 52/103 (50%)
Frame = +3
Query: 297 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 476
L ++++ + V K + G+ F A +GD G +G+G S+EV A++ A+ A+
Sbjct: 21 LKEKMVSVNRVTKVVKGGRILGFAALTVVGDGKGSVGMGKGKSREVPLAVQKAMDEARQR 80
Query: 477 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
++ V N I T+ V G+ G+ V + PA GTGI
Sbjct: 81 MVRV------NLIN--GTLHHSVIGRHGAARVYMQPASEGTGI 115
>UniRef50_A4S3U8 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 148
Score = 44.0 bits (99), Expect = 0.003
Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Frame = +3
Query: 309 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 488
V+ + K T+ G T F A V +G+ +G IG +V AI A A S+ V
Sbjct: 4 VIDVNRTTKVTKGGDLTNFTAMVVVGNGDGVIGFATGKGADVGMAIDKAYRKAARSLTYV 63
Query: 489 RRGYWGNKIGKPHTVPCKVTGK-CGSVTVRLIPAPRGTGI 605
+R + HT+ +V GK C ++ V ++PAP G GI
Sbjct: 64 QRF-------EDHTIYHEVRGKYCKTICV-MLPAPSGDGI 95
>UniRef50_Q4FLN5 Cluster: 30S ribosomal protein S5; n=4;
Rickettsiales|Rep: 30S ribosomal protein S5 -
Pelagibacter ubique
Length = 170
Score = 44.0 bits (99), Expect = 0.003
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Frame = +3
Query: 303 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LS 476
++++ I + K + G+R F A V +G+ G IG+ +K+V AI+ A A+ L
Sbjct: 13 EKLVHINRITKVVKGGRRFGFSALVVVGNQAGKIGVAHAKAKQVPDAIKKANETARRVLI 72
Query: 477 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
+P+R G T+ V GK G+ + L AP+GTGI
Sbjct: 73 HVPLREG---------RTIHHDVYGKDGAGKIILRSAPKGTGI 106
>UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG00649.1 - Gibberella zeae PH-1
Length = 504
Score = 43.6 bits (98), Expect = 0.004
Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Frame = +3
Query: 327 VQKQTRAGQRTRFKAFVAI-GDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYW 503
V QTR G + R + VAI G+ NG +GLG+ S E A A +LA ++ PVRR +
Sbjct: 350 VSNQTRLG-KVRSTSVVAIAGNGNGRLGLGMAKSTEPGVAEETAQMLAIRNMKPVRR--Y 406
Query: 504 GNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
N+ T+ VT K V L+ P G G+
Sbjct: 407 ENR-----TIYGNVTSKISGTVVELMARPPGFGL 435
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 43.6 bits (98), Expect = 0.004
Identities = 32/103 (31%), Positives = 48/103 (46%)
Frame = +3
Query: 297 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 476
L ++V+ I K + G+R F A +GD NG +G+G + EV AI+ A+
Sbjct: 71 LVEKVVFINRCAKVVKGGRRFSFSALAVVGDKNGKVGIGYGKANEVPDAIKKGTENARKR 130
Query: 477 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
++ V K T+P +V G V L PA GTG+
Sbjct: 131 MVSVTL--------KGDTIPHEVFGTHDGGKVLLRPAVTGTGL 165
>UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep:
Ribosomal protein S5 - Victivallis vadensis ATCC BAA-548
Length = 181
Score = 43.6 bits (98), Expect = 0.004
Identities = 31/102 (30%), Positives = 47/102 (46%)
Frame = +3
Query: 300 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 479
++ V+ I K + G+ F A V +GD G +G G + EV+ AIR A+ ++
Sbjct: 16 DESVISINRSAKVVKGGKNFSFGALVVVGDRKGRVGYGYGKANEVSDAIRKGGEAARRNL 75
Query: 480 LPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
+ V T+P +V K G V L PA GTG+
Sbjct: 76 VTVPM--------HGQTLPHEVEVKFGGARVLLRPASAGTGL 109
>UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondrial
ribosome structure: Pubmed 11279123. precursor; n=9;
Eurotiomycetidae|Rep: Remark: literature about the
mitochondrial ribosome structure: Pubmed 11279123.
precursor - Aspergillus niger
Length = 444
Score = 42.3 bits (95), Expect = 0.009
Identities = 33/104 (31%), Positives = 50/104 (48%)
Frame = +3
Query: 294 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 473
SL + L I V QTR G+ G+ NG +G+G+ S E+ A + A A
Sbjct: 254 SLYIKDLVIRRVSNQTRLGKVPSMSVVTVAGNQNGLMGIGIAKSDEIIDACQQARARAVK 313
Query: 474 SVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
++ PV R Y + T+ V GK G+V ++L+ P G G+
Sbjct: 314 NMQPVPR-Y------EKRTIFGDVEGKVGAVQLKLMHRPPGFGL 350
>UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1;
Neurospora crassa|Rep: Related to ribosomal protein S5 -
Neurospora crassa
Length = 477
Score = 41.1 bits (92), Expect = 0.020
Identities = 30/93 (32%), Positives = 46/93 (49%)
Frame = +3
Query: 327 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWG 506
V QTR G+ V G+ +G +GLG+ S E + A+ A +LA ++ P+ R +
Sbjct: 323 VVNQTRLGKIASDSVMVIAGNGDGWLGLGMAKSVEASIAVEKATLLAIQNMQPIPR--YE 380
Query: 507 NKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
N+ T+ +VT K VRL P G G+
Sbjct: 381 NR-----TIYGEVTTKVSGTIVRLNSRPPGFGL 408
>UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7;
Chlamydiaceae|Rep: 30S ribosomal protein S5 -
Chlamydophila abortus
Length = 165
Score = 41.1 bits (92), Expect = 0.020
Identities = 30/103 (29%), Positives = 48/103 (46%)
Frame = +3
Query: 297 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 476
L ++VL + K + G++ F A + +GD G +G G + E+ AIR A+ +
Sbjct: 13 LEEKVLVVNRCSKVVKGGRKFSFSALILVGDGKGRLGYGFAKANELTDAIRKGGEAARKN 72
Query: 477 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
++ + G+ I PH V G + L PA GTGI
Sbjct: 73 LITI-ESLEGDSI--PHEVLVDQDG----AQLLLKPAKPGTGI 108
>UniRef50_Q7R438 Cluster: GLP_254_52826_53383; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_254_52826_53383 - Giardia lamblia
ATCC 50803
Length = 185
Score = 40.3 bits (90), Expect = 0.035
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = -3
Query: 398 TVVVANGNKCLETCALSGTCLFLYRHDLKNLIIQ-GRAEEEINDLEFFDW*RKQVNALEF 222
+V V + + E L G L L RHD+ +L+ + +E +NDL D R N ++
Sbjct: 44 SVTVPDYHMSTEPRTLPGCGLLLDRHDIAHLLRKLALRKEVVNDLCLLDGERILENVIKG 103
Query: 221 VDFSFANKTAEFGDRNPLFLVFL 153
+ S ++ AEF R PLFL+ L
Sbjct: 104 LYLSCLHQAAEFRGRMPLFLLHL 126
>UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: 30S ribosomal
protein S5 - Neorickettsia sennetsu (strain Miyayama)
Length = 172
Score = 40.3 bits (90), Expect = 0.035
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Frame = +3
Query: 297 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 476
L + V+ I V K T+ G++ F+ +GD G +G EV A A+ AK +
Sbjct: 11 LFESVVDIARVSKVTKGGRQFSFRVAALVGDKKGCVGYATAKHDEVLDARSKAVRKAKGA 70
Query: 477 VL--PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
++ P+R G T+ K G+ + + PAP GTGI
Sbjct: 71 MIRFPLREG---------RTIHHDCFSKLGASKLFIKPAPEGTGI 106
>UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 414
Score = 39.9 bits (89), Expect = 0.046
Identities = 30/103 (29%), Positives = 48/103 (46%)
Frame = +3
Query: 297 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 476
L ++L V QTR G+ + +G+ NG IGLG S + A+ A ++A +
Sbjct: 250 LRHKILVQRFVTNQTRLGKVQSWHIMTIVGNGNGRIGLGEAKSVDGQIAMHKARLMAIKN 309
Query: 477 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
++P+RR Y + T+ KV K V + P G G+
Sbjct: 310 MVPIRR-Y------EDRTIYGKVKVKIAGTVVEMAARPPGFGL 345
>UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;
n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 208
Score = 39.1 bits (87), Expect = 0.080
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = -1
Query: 604 IPVPRGAGISRTVTEPHLPVTLQGTVCGFPILLP 503
+PVP GAG+ T TEP P+TL G +CG LLP
Sbjct: 44 MPVPMGAGMKSTRTEPQWPITLCG-LCGACCLLP 76
>UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 407
Score = 39.1 bits (87), Expect = 0.080
Identities = 30/104 (28%), Positives = 49/104 (47%)
Frame = +3
Query: 294 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 473
+L+ + L V QTR G+ + +G+ NG +G+G S E + A A +LA
Sbjct: 242 NLHSKQLVQRRVANQTRLGKVQKASIMYVVGNGNGWLGIGEAKSTEPSIAGLKARLLAIR 301
Query: 474 SVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
++ P+RR Y + T+ VT K V++ P G G+
Sbjct: 302 NMRPIRR-Y------EDRTIYGSVTAKVSGTVVKMNARPPGFGL 338
>UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis
group|Rep: 30S ribosomal protein S5 - Ehrlichia
ruminantium (strain Gardel)
Length = 174
Score = 37.5 bits (83), Expect = 0.24
Identities = 28/99 (28%), Positives = 45/99 (45%)
Frame = +3
Query: 309 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 488
++ + V K + G+R F V IGD G +G G+ EV+ A A+ A+ +++ V
Sbjct: 20 IVSVRRVAKVVKGGRRFSFSVLVVIGDEKGKVGCGIGKHLEVSEAKVKAVNAARKNMIRV 79
Query: 489 RRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
+ + T+ + K S V L A GTGI
Sbjct: 80 H-------LRESRTLHHDIQAKFCSSKVMLRSAKVGTGI 111
>UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1;
Listeria monocytogenes str. 4b H7858|Rep: Putative
uncharacterized protein - Listeria monocytogenes str. 4b
H7858
Length = 77
Score = 37.1 bits (82), Expect = 0.32
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -3
Query: 458 NSASNGSGDFLAALHTQTNMTVVVANGNKCLET 360
NS ++ +FL T+TNMT+ V+N NKC ET
Sbjct: 25 NSFTDSIWNFLRFTSTETNMTIFVSNNNKCCET 57
>UniRef50_Q8CJM4 Cluster: Putative uncharacterized protein SCO6580;
n=2; Actinomycetales|Rep: Putative uncharacterized
protein SCO6580 - Streptomyces coelicolor
Length = 404
Score = 35.1 bits (77), Expect = 1.3
Identities = 23/62 (37%), Positives = 26/62 (41%), Gaps = 5/62 (8%)
Frame = -2
Query: 174 PTLSGLPCRAHDHGRDHDRVHEDRHGLYLHRVIRIRRENR-----TVHRLEQRPPLLNDG 10
P P AHD RDHD H HG H I + + R TV R PL +D
Sbjct: 51 PVFGASPALAHDRDRDHDHGHGHGHG---HGQILVPADKRGIILYTVRDATARDPLASDL 107
Query: 9 PS 4
PS
Sbjct: 108 PS 109
>UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium
falciparum|Rep: Rps5 protein - Plasmodium falciparum
Length = 239
Score = 34.7 bits (76), Expect = 1.7
Identities = 21/66 (31%), Positives = 37/66 (56%)
Frame = +3
Query: 285 LGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 464
L ++ +++++I + + G+ R+K + +G+ G IGLGV SK + I AII
Sbjct: 94 LNNNIIEKIIEIKKISYTIKKGRIRRYKIVLVLGNKQGWIGLGV--SKNI--NINKAIIS 149
Query: 465 AKLSVL 482
AK+ L
Sbjct: 150 AKIKAL 155
>UniRef50_A6S1U3 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 411
Score = 34.7 bits (76), Expect = 1.7
Identities = 29/103 (28%), Positives = 45/103 (43%)
Frame = +3
Query: 297 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 476
L+ ++L V QTR G+ G+ G +G+G +E A I A +
Sbjct: 248 LDTKILVSHRVVNQTRLGKIDSMYVLAIAGNGRGRLGIGEAKGQEPEDTNNNAKIAAIKN 307
Query: 477 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 605
+ PV R Y + T+ V GK +V V+L+ P G G+
Sbjct: 308 MQPVPR-Y------EERTIYGDVEGKVSAVEVKLMARPPGFGL 343
>UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein S5, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 307
Score = 34.7 bits (76), Expect = 1.7
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +3
Query: 282 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV-KCSKEVATAI 446
++ L + L + V QT G+ F A V +GD NG +GLG K +E++ AI
Sbjct: 139 YITRKLTMKPLVMKRVSNQTGKGKIASFYALVVVGDKNGMVGLGEGKSREEMSKAI 194
>UniRef50_UPI0000F2DE4B Cluster: PREDICTED: similar to thioredoxin
domain containing 3 (spermatozoa),; n=1; Monodelphis
domestica|Rep: PREDICTED: similar to thioredoxin domain
containing 3 (spermatozoa), - Monodelphis domestica
Length = 559
Score = 33.5 bits (73), Expect = 4.0
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +3
Query: 219 DKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQ--RTRFKAFVAIGDN 392
DK E ++LFSL K ++ P LN +VL+++ +++ AG+ R + + I
Sbjct: 81 DKCEPVFLFSLNGKIVSMVKGANAPLLNSKVLQLIEDERKVLAGEIPRRSDEYNILIIKP 140
Query: 393 NGHIGLGVKCSKEVATAIRGAIILAKLSVL 482
NG V K++ T GA I+A++ +L
Sbjct: 141 NGVEEEKVDTIKQLITGF-GAEIVAEMQLL 169
>UniRef50_Q1III4 Cluster: Molybdenum cofactor synthesis-like; n=1;
Acidobacteria bacterium Ellin345|Rep: Molybdenum
cofactor synthesis-like - Acidobacteria bacterium
(strain Ellin345)
Length = 338
Score = 33.5 bits (73), Expect = 4.0
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Frame = -3
Query: 344 TCLFLYR-HDLKNLIIQGRAEEEIND-LEFFDW*RKQVNALEFVDFSFANKT 195
TCLF R HDL +LI++G ++EEI D + + ++Q + + DF A++T
Sbjct: 281 TCLFSVREHDLASLILEGASDEEIADRIRYAVENKEQRHHIGEADFMPASRT 332
>UniRef50_Q9RS86 Cluster: Ribosomal protein S2-related protein; n=5;
Bacteria|Rep: Ribosomal protein S2-related protein -
Deinococcus radiodurans
Length = 472
Score = 33.1 bits (72), Expect = 5.2
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +3
Query: 366 KAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIG 518
++ V IG + H G + +++VA A+RG + L V GYW + G
Sbjct: 2 RSLVLIGHGSHHHGESARATQQVAEALRGRGLAGHLPYDEVLEGYWQQEPG 52
>UniRef50_Q01BF6 Cluster: COG0457: FOG: TPR repeat; n=2;
Ostreococcus|Rep: COG0457: FOG: TPR repeat - Ostreococcus
tauri
Length = 1474
Score = 33.1 bits (72), Expect = 5.2
Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 4/37 (10%)
Frame = -3
Query: 368 LETCALSGTCLFLYRHDLKNLI----IQGRAEEEIND 270
LE+CAL TC+ +Y HD+ ++ + +A+E+++D
Sbjct: 965 LESCALDDTCVIVYEHDMNRVMLCRTLVSKAKEKLSD 1001
>UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 270
Score = 33.1 bits (72), Expect = 5.2
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 309 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 455
V+++ V T G++ +A V +G+ NG G GV + +AIR A
Sbjct: 156 VVELRRVSNVTSGGKKRSLRALVVVGNRNGAAGFGVGKGRTPISAIRKA 204
>UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila
pseudoobscura|Rep: GA16916-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 391
Score = 32.7 bits (71), Expect = 6.9
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Frame = -2
Query: 180 QEPTLSGLPCRAHDHGRDHDRVHE-DRHGLYLHRVIRIR--RENRTV---HRLEQRPPL 22
+EPT S CR+ GR H R G HR+ R R +R++ HRL + PP+
Sbjct: 146 REPTRSPSRCRSRQSGRSHQHPQRRSRSGTRQHRLSREPPIRHSRSISRQHRLSREPPV 204
>UniRef50_Q12FM3 Cluster: Phage integrase; n=2; Proteobacteria|Rep:
Phage integrase - Polaromonas sp. (strain JS666 / ATCC
BAA-500)
Length = 311
Score = 32.3 bits (70), Expect = 9.2
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -2
Query: 150 RAHDHGRDHDRVHEDRHGLYLHRVIRIRRENRTVHRL 40
R HD GR R+H+ RH + R++R RE V RL
Sbjct: 230 RRHDGGRYQPRLHDLRHTAAVTRLVRWYREGVDVQRL 266
>UniRef50_Q01TB9 Cluster: Putative uncharacterized protein
precursor; n=1; Solibacter usitatus Ellin6076|Rep:
Putative uncharacterized protein precursor - Solibacter
usitatus (strain Ellin6076)
Length = 1319
Score = 32.3 bits (70), Expect = 9.2
Identities = 29/82 (35%), Positives = 39/82 (47%)
Frame = -3
Query: 587 GRNQPDCYGTTLAGDLARDGVWLSYLVTPVTSSDW*N*QLSKDNSASNGSGDFLAALHTQ 408
G N P TTLA + + G LSY VTP T+S N L + S S SG +++
Sbjct: 558 GTNNPGA--TTLAVN-SSTGATLSYTVTPATASCGGN-WLLVNGSTSAASGTTASSV-AL 612
Query: 407 TNMTVVVANGNKCLETCALSGT 342
+ T +A G C T +S T
Sbjct: 613 SAATTGIAAGTTCTGTVTISAT 634
>UniRef50_Q9MTD9 Cluster: Ribosomal protein S5; n=1; Toxoplasma
gondii|Rep: Ribosomal protein S5 - Toxoplasma gondii
Length = 268
Score = 32.3 bits (70), Expect = 9.2
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +3
Query: 306 EVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 467
++++I + K + G+ RFK + IG N IG+GV + AI A A
Sbjct: 134 KIIEIKKISKTKQKGRIRRFKVLLLIGAKNAWIGIGVSKDFYLQEAINKARFFA 187
>UniRef50_Q4WLB1 Cluster: CDF zinc transporter (Msc2), putaitve;
n=7; Eurotiomycetidae|Rep: CDF zinc transporter (Msc2),
putaitve - Aspergillus fumigatus (Sartorya fumigata)
Length = 877
Score = 32.3 bits (70), Expect = 9.2
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2
Query: 144 HDHGRDHDRVHEDRHGLYLH 85
HDHG H +E+ HG++LH
Sbjct: 649 HDHGHSHSHGNENMHGIFLH 668
>UniRef50_Q9NQ11 Cluster: Probable cation-transporting ATPase 13A2;
n=23; Euteleostomi|Rep: Probable cation-transporting
ATPase 13A2 - Homo sapiens (Human)
Length = 1180
Score = 32.3 bits (70), Expect = 9.2
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = -2
Query: 228 RVCRFFLREQDGRVW*QEPTLSGLPCRAHDHGRDHDRVHEDRHGLYL 88
RV R++L + +W E + DHGR D VH RHGL L
Sbjct: 161 RVLRYYLFQGQRYIW-IETQQAFYQVSLLDHGRSCDDVHRSRHGLSL 206
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 622,245,200
Number of Sequences: 1657284
Number of extensions: 12744349
Number of successful extensions: 38322
Number of sequences better than 10.0: 99
Number of HSP's better than 10.0 without gapping: 35731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38066
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43147568152
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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