Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0657
(509 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1070 + 33872845-33873726 66 1e-11
08_02_0807 + 21411799-21412665 66 2e-11
09_04_0126 + 14874739-14875581 65 4e-11
10_08_0036 + 14325793-14326457,14326610-14328035 36 0.014
10_08_0041 - 14374684-14377339,14377371-14378233 33 0.13
06_01_0276 + 2035763-2036770 33 0.18
02_04_0201 - 20869057-20869361,20869506-20869922,20870184-20870544 31 0.54
10_08_0032 - 14288522-14290465 30 0.94
11_01_0487 - 3763233-3763733,3763827-3764279,3765270-3765392,376... 29 1.6
05_07_0029 - 27163121-27163818,27163992-27164067,27164184-271658... 29 1.6
09_02_0090 - 4147108-4147191,4147629-4147697,4148089-4148343,414... 29 2.2
04_04_1510 - 34088431-34088718,34089158-34089295,34089413-340894... 29 2.9
09_04_0162 + 15245354-15245458,15245558-15245629,15245793-152466... 27 6.6
04_04_0178 - 23337801-23337896,23337999-23338067,23338171-233382... 27 8.8
>02_05_1070 + 33872845-33873726
Length = 293
Score = 66.5 bits (155), Expect = 1e-11
Identities = 27/54 (50%), Positives = 42/54 (77%)
Frame = -2
Query: 508 LLKLLTDQNLPHEENDFFERLRLYFPTVYDVKYLMKLCKNLKGGLQEVADQLEL 347
LLK+LT +LP + FF+ +++YFPTVYD+K+LMK C +L GGL ++A+ L++
Sbjct: 189 LLKILTCSSLPDTQAGFFKLMKIYFPTVYDIKHLMKFCNSLHGGLNKLAELLDV 242
>08_02_0807 + 21411799-21412665
Length = 288
Score = 65.7 bits (153), Expect = 2e-11
Identities = 26/55 (47%), Positives = 40/55 (72%)
Frame = -2
Query: 508 LLKLLTDQNLPHEENDFFERLRLYFPTVYDVKYLMKLCKNLKGGLQEVADQLELR 344
LL+LLT +NLP FF+ +R+YFP +YD+K+LM+ C NL GGL + + L+++
Sbjct: 177 LLRLLTGRNLPDNMPAFFDLIRIYFPVLYDIKHLMRFCSNLHGGLSRLGELLDVK 231
>09_04_0126 + 14874739-14875581
Length = 280
Score = 64.9 bits (151), Expect = 4e-11
Identities = 35/79 (44%), Positives = 47/79 (59%)
Frame = -2
Query: 508 LLKLLTDQNLPHEENDFFERLRLYFPTVYDVKYLMKLCKNLKGGLQEVADQLELRYFLME 329
LLKLLT LP FF+ +R+YFP VYD+K+LM+ C +L GGL ++A+ L++
Sbjct: 173 LLKLLTGTYLPDTITGFFDLIRIYFPVVYDIKHLMRFCNSLHGGLNKLAELLDVE----- 227
Query: 328 TLKVRVDICTDLELHSLLT 272
RV IC SLLT
Sbjct: 228 ----RVGICHQAGSDSLLT 242
>10_08_0036 + 14325793-14326457,14326610-14328035
Length = 696
Score = 36.3 bits (80), Expect = 0.014
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = -2
Query: 484 NLPHEENDFFERLRLYFPTVYDVKYLMKLCKN-LKGGLQEVADQLELRYF 338
+LP E F +LRL FP +YD++ L +L ++ +G L +AD L + F
Sbjct: 336 HLPLELPTFLHQLRLNFPRLYDIRVLGQLVQHGFRGSLTAIADLLGVNRF 385
Score = 32.7 bits (71), Expect = 0.18
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 8/67 (11%)
Frame = -2
Query: 487 QNLPHEENDFFERLRLYFPTVYDVKYLMKLCKNL--------KGGLQEVADQLELRYFLM 332
Q+LP + + E+ R YFP +YDV ++ ++ KGGL +VA L+L +
Sbjct: 587 QDLPSDWPSYVEQRRAYFPGMYDVALIVHRYPDIGILPTTGCKGGLFDVARALDLNFIKD 646
Query: 331 ETLKVRV 311
+ RV
Sbjct: 647 DNPVTRV 653
>10_08_0041 - 14374684-14377339,14377371-14378233
Length = 1172
Score = 33.1 bits (72), Expect = 0.13
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = -2
Query: 481 LPHEENDFFERLRLYFPTVYDVKYLMKLCKN-LKGGLQEVADQL 353
LP + F +++R FP VYDV+ L KL K+ G L +A+ L
Sbjct: 821 LPPKLATFLQKVREKFPVVYDVRVLGKLVKDGFNGSLTALAEYL 864
Score = 32.3 bits (70), Expect = 0.23
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Frame = -2
Query: 496 LTDQNLPHEENDFFERLRLYFPTVYDVKYLMKLCKNL--------KGGLQEVADQLELR 344
L+ Q+LP + + R +FP +YDV L++ ++ KGGL +VA L L+
Sbjct: 1064 LSPQDLPSQWCSYIGHRRAFFPAIYDVALLVRRSFDIITIPWIECKGGLLDVAQALNLK 1122
>06_01_0276 + 2035763-2036770
Length = 335
Score = 32.7 bits (71), Expect = 0.18
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Frame = -2
Query: 508 LLKLLTD-QNLPHEENDFFERL-RLYFPTVYDVKYLMKLC---KNLKGGLQEVADQL 353
L+K+LT + LP F ++ +++ P V DVK+L K C ++GGL+ VA L
Sbjct: 223 LVKVLTGGRPLPSTLEGFMAKVSKIFGPAVLDVKHLAKFCGGGGGIRGGLEHVAAAL 279
>02_04_0201 - 20869057-20869361,20869506-20869922,20870184-20870544
Length = 360
Score = 31.1 bits (67), Expect = 0.54
Identities = 12/51 (23%), Positives = 29/51 (56%)
Frame = -2
Query: 259 RITWIVETHLDLNCLAKEFNSVVTSVSYQGIEINNNLYLINFEEISLV*TV 107
R W + + C A++ V+T +S +G+ + +L ++NF ++++ +V
Sbjct: 56 RKAWPCHSWRGIGCGARQGKFVITKISLRGMRLRGSLEVLNFSALTMLTSV 106
>10_08_0032 - 14288522-14290465
Length = 647
Score = 30.3 bits (65), Expect = 0.94
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = -2
Query: 484 NLPHEENDFFERLRLYFPTVYDVKYLMKLCKN--LKGGLQEVADQLELR 344
+LP + F RLR FP YDV+ + ++ ++ G L +A+ L +R
Sbjct: 336 DLPRQLAAFLRRLRENFPAFYDVRVIRQMLEDHGFSGKLTGLAEHLGIR 384
>11_01_0487 -
3763233-3763733,3763827-3764279,3765270-3765392,
3765822-3766122,3766283-3766644,3767117-3767713,
3768323-3769447
Length = 1153
Score = 29.5 bits (63), Expect = 1.6
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Frame = -2
Query: 418 VKYLMKLCK--NLKGGLQEVADQLELRYFLMETLKVRVDICTDLELHSLLTPT-TSRITW 248
+K L++LC + +GG++ + L ET + + +L + TP +SR+ W
Sbjct: 527 LKLLVRLCHIYDTRGGVKTIKAGASQDQILNETRLRNLQLQLIRDLREVHTPRISSRLIW 586
Query: 247 IVETHLDLNCL 215
+ H DL L
Sbjct: 587 AISEHFDLEGL 597
>05_07_0029 -
27163121-27163818,27163992-27164067,27164184-27165896,
27166285-27166364,27166516-27166684
Length = 911
Score = 29.5 bits (63), Expect = 1.6
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +3
Query: 144 RYKLLFISIPWYETEVTTELNSLARQFRSR*VSTIHVILEVVGVSSEWSSKSVQMSTRTF 323
+ + L + P+Y EVTT L + +S + T V+ ++G+S+ + S Q + +T
Sbjct: 78 KMRTLLLDAPYYPNEVTTRLPPPGQDNKSSEMCTPGVVARLMGLSA-MPATSHQKAVKTM 136
Query: 324 NVS 332
+ S
Sbjct: 137 DAS 139
>09_02_0090 -
4147108-4147191,4147629-4147697,4148089-4148343,
4148701-4148865,4149000-4149044,4149193-4149267,
4149397-4149573,4149680-4149904,4150058-4150183
Length = 406
Score = 29.1 bits (62), Expect = 2.2
Identities = 13/26 (50%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = -2
Query: 421 DVKYLMKLCKNL-KGGLQEVADQLEL 347
D+KY++++CKNL L EV D+ EL
Sbjct: 253 DIKYMLRICKNLGMTALIEVHDEREL 278
>04_04_1510 -
34088431-34088718,34089158-34089295,34089413-34089498,
34090339-34090466,34091656-34091900
Length = 294
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 214 QGSSDQDEFPLSTLSWKLLALVVNGAPSPYRCPLVLSMF 330
+G QD+ P+ L W +L+V +P P+V S F
Sbjct: 159 EGKIAQDDQPIRRLKWGTASLIVRAPVTPIVLPIVHSGF 197
>09_04_0162 +
15245354-15245458,15245558-15245629,15245793-15246617,
15247787-15248474,15248805-15248821
Length = 568
Score = 27.5 bits (58), Expect = 6.6
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +3
Query: 306 MSTRTFNVSIKKYLNSN*SATSCKPPLRFLQSFIRY 413
+ T T N +K + T+CK +R LQS+ +Y
Sbjct: 308 LQTNTTNPLVKNRKQNKVVYTNCKAEMRILQSYTKY 343
>04_04_0178 -
23337801-23337896,23337999-23338067,23338171-23338253,
23338694-23338772,23338956-23339120,23339230-23339274,
23339370-23339444,23340135-23340311,23340398-23340721,
23340829-23340897
Length = 393
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = -2
Query: 421 DVKYLMKLCKNL-KGGLQEVADQLEL 347
D+KY++K+CK L L EV D+ E+
Sbjct: 267 DIKYMLKICKILGMAALVEVHDEREM 292
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,232,339
Number of Sequences: 37544
Number of extensions: 202606
Number of successful extensions: 487
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 487
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1095026320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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