Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0657
(509 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L46722-1|AAF01500.1| 262|Homo sapiens BTG1 binding factor 1 pro... 94 3e-19
BT006685-1|AAP35331.1| 246|Homo sapiens CCR4-NOT transcription ... 94 3e-19
BC070187-1|AAH70187.1| 285|Homo sapiens CCR4-NOT transcription ... 94 3e-19
BC060852-1|AAH60852.1| 285|Homo sapiens CCR4-NOT transcription ... 94 3e-19
BC007315-1|AAH07315.1| 246|Homo sapiens CNOT7 protein protein. 94 3e-19
AF086915-1|AAP97145.1| 285|Homo sapiens CAF1 protein. 94 3e-19
BT006857-1|AAP35503.1| 292|Homo sapiens CCR4-NOT transcription ... 90 4e-18
BC017366-1|AAH17366.1| 292|Homo sapiens CNOT8 protein protein. 90 4e-18
AK025358-1|BAB15119.1| 292|Homo sapiens protein ( Homo sapiens ... 90 4e-18
AF180476-1|AAF29830.1| 292|Homo sapiens CALIFp protein. 90 4e-18
AF087844-1|AAP97157.1| 292|Homo sapiens CAF2 protein. 90 4e-18
AF053318-1|AAD02685.1| 292|Homo sapiens CCR4-associated factor ... 85 2e-16
>L46722-1|AAF01500.1| 262|Homo sapiens BTG1 binding factor 1
protein.
Length = 262
Score = 93.9 bits (223), Expect = 3e-19
Identities = 42/54 (77%), Positives = 48/54 (88%)
Frame = -2
Query: 508 LLKLLTDQNLPHEENDFFERLRLYFPTVYDVKYLMKLCKNLKGGLQEVADQLEL 347
L+K+LT+ NLP EE DFFE LRL+FP +YDVKYLMK CKNLKGGLQEVA+QLEL
Sbjct: 142 LIKILTNSNLPEEELDFFEILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLEL 195
>BT006685-1|AAP35331.1| 246|Homo sapiens CCR4-NOT transcription
complex, subunit 7 protein.
Length = 246
Score = 93.9 bits (223), Expect = 3e-19
Identities = 42/54 (77%), Positives = 48/54 (88%)
Frame = -2
Query: 508 LLKLLTDQNLPHEENDFFERLRLYFPTVYDVKYLMKLCKNLKGGLQEVADQLEL 347
L+K+LT+ NLP EE DFFE LRL+FP +YDVKYLMK CKNLKGGLQEVA+QLEL
Sbjct: 165 LIKILTNSNLPEEELDFFEILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLEL 218
>BC070187-1|AAH70187.1| 285|Homo sapiens CCR4-NOT transcription
complex, subunit 7 protein.
Length = 285
Score = 93.9 bits (223), Expect = 3e-19
Identities = 42/54 (77%), Positives = 48/54 (88%)
Frame = -2
Query: 508 LLKLLTDQNLPHEENDFFERLRLYFPTVYDVKYLMKLCKNLKGGLQEVADQLEL 347
L+K+LT+ NLP EE DFFE LRL+FP +YDVKYLMK CKNLKGGLQEVA+QLEL
Sbjct: 165 LIKILTNSNLPEEELDFFEILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLEL 218
>BC060852-1|AAH60852.1| 285|Homo sapiens CCR4-NOT transcription
complex, subunit 7 protein.
Length = 285
Score = 93.9 bits (223), Expect = 3e-19
Identities = 42/54 (77%), Positives = 48/54 (88%)
Frame = -2
Query: 508 LLKLLTDQNLPHEENDFFERLRLYFPTVYDVKYLMKLCKNLKGGLQEVADQLEL 347
L+K+LT+ NLP EE DFFE LRL+FP +YDVKYLMK CKNLKGGLQEVA+QLEL
Sbjct: 165 LIKILTNSNLPEEELDFFEILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLEL 218
>BC007315-1|AAH07315.1| 246|Homo sapiens CNOT7 protein protein.
Length = 246
Score = 93.9 bits (223), Expect = 3e-19
Identities = 42/54 (77%), Positives = 48/54 (88%)
Frame = -2
Query: 508 LLKLLTDQNLPHEENDFFERLRLYFPTVYDVKYLMKLCKNLKGGLQEVADQLEL 347
L+K+LT+ NLP EE DFFE LRL+FP +YDVKYLMK CKNLKGGLQEVA+QLEL
Sbjct: 165 LIKILTNSNLPEEELDFFEILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLEL 218
>AF086915-1|AAP97145.1| 285|Homo sapiens CAF1 protein.
Length = 285
Score = 93.9 bits (223), Expect = 3e-19
Identities = 42/54 (77%), Positives = 48/54 (88%)
Frame = -2
Query: 508 LLKLLTDQNLPHEENDFFERLRLYFPTVYDVKYLMKLCKNLKGGLQEVADQLEL 347
L+K+LT+ NLP EE DFFE LRL+FP +YDVKYLMK CKNLKGGLQEVA+QLEL
Sbjct: 165 LIKILTNSNLPEEELDFFEILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLEL 218
>BT006857-1|AAP35503.1| 292|Homo sapiens CCR4-NOT transcription
complex, subunit 8 protein.
Length = 292
Score = 90.2 bits (214), Expect = 4e-18
Identities = 39/55 (70%), Positives = 48/55 (87%)
Frame = -2
Query: 508 LLKLLTDQNLPHEENDFFERLRLYFPTVYDVKYLMKLCKNLKGGLQEVADQLELR 344
++KLLTD LP EE++FF L L+FP++YDVKYLMK CKNLKGGLQEVADQL+L+
Sbjct: 165 MVKLLTDSRLPEEEHEFFHILNLFFPSIYDVKYLMKSCKNLKGGLQEVADQLDLQ 219
>BC017366-1|AAH17366.1| 292|Homo sapiens CNOT8 protein protein.
Length = 292
Score = 90.2 bits (214), Expect = 4e-18
Identities = 39/55 (70%), Positives = 48/55 (87%)
Frame = -2
Query: 508 LLKLLTDQNLPHEENDFFERLRLYFPTVYDVKYLMKLCKNLKGGLQEVADQLELR 344
++KLLTD LP EE++FF L L+FP++YDVKYLMK CKNLKGGLQEVADQL+L+
Sbjct: 165 MVKLLTDSRLPEEEHEFFHILNLFFPSIYDVKYLMKSCKNLKGGLQEVADQLDLQ 219
>AK025358-1|BAB15119.1| 292|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21705 fis, clone COL09940. ).
Length = 292
Score = 90.2 bits (214), Expect = 4e-18
Identities = 39/55 (70%), Positives = 48/55 (87%)
Frame = -2
Query: 508 LLKLLTDQNLPHEENDFFERLRLYFPTVYDVKYLMKLCKNLKGGLQEVADQLELR 344
++KLLTD LP EE++FF L L+FP++YDVKYLMK CKNLKGGLQEVADQL+L+
Sbjct: 165 MVKLLTDSRLPEEEHEFFHILNLFFPSIYDVKYLMKSCKNLKGGLQEVADQLDLQ 219
>AF180476-1|AAF29830.1| 292|Homo sapiens CALIFp protein.
Length = 292
Score = 90.2 bits (214), Expect = 4e-18
Identities = 39/55 (70%), Positives = 48/55 (87%)
Frame = -2
Query: 508 LLKLLTDQNLPHEENDFFERLRLYFPTVYDVKYLMKLCKNLKGGLQEVADQLELR 344
++KLLTD LP EE++FF L L+FP++YDVKYLMK CKNLKGGLQEVADQL+L+
Sbjct: 165 MVKLLTDSRLPEEEHEFFHILNLFFPSIYDVKYLMKSCKNLKGGLQEVADQLDLQ 219
>AF087844-1|AAP97157.1| 292|Homo sapiens CAF2 protein.
Length = 292
Score = 90.2 bits (214), Expect = 4e-18
Identities = 39/55 (70%), Positives = 48/55 (87%)
Frame = -2
Query: 508 LLKLLTDQNLPHEENDFFERLRLYFPTVYDVKYLMKLCKNLKGGLQEVADQLELR 344
++KLLTD LP EE++FF L L+FP++YDVKYLMK CKNLKGGLQEVADQL+L+
Sbjct: 165 MVKLLTDSRLPEEEHEFFHILNLFFPSIYDVKYLMKSCKNLKGGLQEVADQLDLQ 219
>AF053318-1|AAD02685.1| 292|Homo sapiens CCR4-associated factor 1
protein.
Length = 292
Score = 84.6 bits (200), Expect = 2e-16
Identities = 37/55 (67%), Positives = 46/55 (83%)
Frame = -2
Query: 508 LLKLLTDQNLPHEENDFFERLRLYFPTVYDVKYLMKLCKNLKGGLQEVADQLELR 344
++KLLTD LP EE++F L L+ P++YDVKYLMK CKNLKGGLQEVADQL+L+
Sbjct: 165 MVKLLTDSRLPEEEHEFLHILNLFSPSIYDVKYLMKSCKNLKGGLQEVADQLDLQ 219
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,740,047
Number of Sequences: 237096
Number of extensions: 1208720
Number of successful extensions: 2230
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2230
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4763295768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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