Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0657
         (509 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   1.8  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      23   1.8  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   9.8  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 11/54 (20%), Positives = 26/54 (48%)
 Frame = -2

Query: 295 LELHSLLTPTTSRITWIVETHLDLNCLAKEFNSVVTSVSYQGIEINNNLYLINF 134
           L  +++ TP  S   + V    +L   AK+F +   + ++  + +N+ ++   F
Sbjct: 91  LSRNAIFTPLNSEQKYEVRMLFELLYNAKDFQTFYKTAAWARLRMNSGMFTTAF 144


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 11/54 (20%), Positives = 26/54 (48%)
 Frame = -2

Query: 295 LELHSLLTPTTSRITWIVETHLDLNCLAKEFNSVVTSVSYQGIEINNNLYLINF 134
           L  +++ TP  S   + V    +L   AK+F +   + ++  + +N+ ++   F
Sbjct: 91  LSRNAIFTPLNSEQKYEVRMLFELLYNAKDFQTFYKTAAWARLRMNSGMFTTAF 144


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 481  LPHEENDFFERLRLYFPTVYDV 416
            L   E  F+ERLR   P+  D+
Sbjct: 1189 LTWNEKRFWERLRYAIPSAGDI 1210


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,308
Number of Sequences: 438
Number of extensions: 2322
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14109465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)