Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0656
         (544 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0383 - 17004520-17005150,17005205-17005327,17005641-17007142     31   0.59 
09_04_0609 - 18929600-18929646,18929753-18929924,18930304-189304...    29   1.8  
01_06_1320 + 36272716-36273339,36274222-36275762,36276349-362764...    29   2.4  
04_01_0041 - 464695-464850,467485-469029                               29   3.2  
03_05_1065 + 30061588-30061883,30061995-30062056,30062196-300622...    28   4.2  
08_01_0639 + 5544411-5544413,5545000-5545343,5546420-5546849           27   9.7  
01_06_0124 - 26692731-26697046,26698749-26698827,26698899-266989...    27   9.7  

>11_04_0383 - 17004520-17005150,17005205-17005327,17005641-17007142
          Length = 751

 Score = 31.1 bits (67), Expect = 0.59
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = -1

Query: 271 SPDSDYFRCVSSNVLTVSVLMNSKSGYL--LDSSLSHKCLLTRTTV 140
           SP  D+ RC+S  +    V   S SG++  L SS+ +   +T  TV
Sbjct: 35  SPIDDFLRCLSGKIPAEQVFTQSSSGFMAELTSSVQNPRFVTNATV 80


>09_04_0609 -
           18929600-18929646,18929753-18929924,18930304-18930498,
           18930691-18930801,18930885-18931097,18931643-18931720,
           18931894-18932001,18932175-18932316,18932413-18933761,
           18934492-18935121
          Length = 1014

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = -3

Query: 242 VQQCSDCVSFDEFEIWISTGQQSKP*MSAHTYNCK 138
           +Q+C +C+  +     +S+ Q     +S HTY C+
Sbjct: 803 IQKCIECIPLEHIGFLVSSFQCQVAKLSMHTYGCR 837


>01_06_1320 +
           36272716-36273339,36274222-36275762,36276349-36276490,
           36276622-36276729,36276814-36277026,36277113-36277223,
           36278056-36278250,36278874-36279048,36279189-36279226
          Length = 1048

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -3

Query: 242 VQQCSDCVSFDEFEIWISTGQQSKP*MSAHTYNCK 138
           +Q+C +CV  D  +  IST       +S H Y C+
Sbjct: 839 IQKCIECVPEDSIQFIISTFYGQVVPLSTHPYGCR 873


>04_01_0041 - 464695-464850,467485-469029
          Length = 566

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = -2

Query: 366 IPISLVNNVLYEFFFDFIDVRITFHGQ*YVNDLLIPIISDACPAMF 229
           +  + VN  L   F  F DV +T     Y+    +PI+S  C A +
Sbjct: 31  VEFTKVNTKLISVFRPFTDVSLTLCRSNYIGVTNLPIVSSECEAYY 76


>03_05_1065 + 30061588-30061883,30061995-30062056,30062196-30062276,
            30062391-30062464,30062547-30062629,30063044-30063147,
            30063526-30063665,30063736-30063783,30063939-30063991,
            30064178-30064262,30064346-30064412,30064496-30064606,
            30065262-30065283,30066244-30071110,30071186-30071374,
            30071463-30071577,30072329-30073388,30074247-30074694,
            30074966-30075019,30075105-30076898,30076989-30077949,
            30078271-30078384,30078459-30078613,30078934-30079026,
            30079341-30079613,30093423-30093975,30094465-30094540,
            30094619-30094718
          Length = 4025

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
 Frame = -1

Query: 271  SPDSDYFRCVSSNVLT----VSVLMNSKSGYLLDSSLSHKCLLTRT 146
            SP +   + +S N+L+    +SVL+N   G LLD   S   L+TR+
Sbjct: 3402 SPHAQKSKVLSQNILSDDKFISVLLNISRGNLLDKIQSSVSLVTRS 3447


>08_01_0639 + 5544411-5544413,5545000-5545343,5546420-5546849
          Length = 258

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = -2

Query: 378 HE-LSIPISLVNNVLYEFFFDFIDVRI-TFHGQ*YVNDLLIPIISDACPAMF*LC 220
           HE LS+   +V + +     D  D R+  F GQ +VND L+  I D  P +  LC
Sbjct: 70  HEALSLKEPIVMSEMARAAVDRSDGRLEAFEGQWFVNDGLLNYIRDRSPKLKRLC 124


>01_06_0124 -
           26692731-26697046,26698749-26698827,26698899-26698955,
           26699321-26699416
          Length = 1515

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = +1

Query: 202 SNSSKLTQSEHCWTRIGNNRNQEIINVLLAVKGNPNVDEIKEKL 333
           S SS+L Q E  +  +GN+  QE+  + +  K N +++ +   L
Sbjct: 471 SLSSELQQLEASFENLGNDLEQELERISIMHKNNEDLELVNSNL 514


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,088,441
Number of Sequences: 37544
Number of extensions: 234205
Number of successful extensions: 519
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 519
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1210221432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)