Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0656
         (544 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    29   0.040
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    25   0.66 
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    24   1.2  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    24   1.2  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    24   1.2  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    24   1.2  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     23   2.7  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   8.1  

>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 28.7 bits (61), Expect = 0.040
 Identities = 16/61 (26%), Positives = 22/61 (36%)
 Frame = +1

Query: 238 WTRIGNNRNQEIINVLLAVKGNPNVDEIKEKLIEHVIDKRDRNGQFMFPRLRHLLVSCWG 417
           W      RN  + N          V    E+  + V +  DRNG   F  L  L + CW 
Sbjct: 275 WVNTSVIRNYTLFNENSEAAARSFVPFSIERSSQSVAEVMDRNGVLFFGLLSDLAIGCWN 334

Query: 418 N 420
           +
Sbjct: 335 S 335


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 24.6 bits (51), Expect = 0.66
 Identities = 13/50 (26%), Positives = 23/50 (46%)
 Frame = +1

Query: 169 GLDCCPVDIQISNSSKLTQSEHCWTRIGNNRNQEIINVLLAVKGNPNVDE 318
           GLD  P    ++  + L  ++  +T + NNRN   +   + +   P  DE
Sbjct: 462 GLDFTPRGAVLARFTHLNHADFSYTIVINNRNNTSMKGTVRIFIGPKEDE 511


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +1

Query: 316 EIKEKLIE-HVIDKRDRNGQFMFPRLRHLLVSCWG 417
           + K+ LI  H   +  RNG   +   RHL++SC G
Sbjct: 154 DFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +1

Query: 316 EIKEKLIE-HVIDKRDRNGQFMFPRLRHLLVSCWG 417
           + K+ LI  H   +  RNG   +   RHL++SC G
Sbjct: 154 DFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +1

Query: 316 EIKEKLIE-HVIDKRDRNGQFMFPRLRHLLVSCWG 417
           + K+ LI  H   +  RNG   +   RHL++SC G
Sbjct: 205 DFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 239


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +1

Query: 316 EIKEKLIE-HVIDKRDRNGQFMFPRLRHLLVSCWG 417
           + K+ LI  H   +  RNG   +   RHL++SC G
Sbjct: 154 DFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 17/49 (34%), Positives = 26/49 (53%)
 Frame = +1

Query: 169 GLDCCPVDIQISNSSKLTQSEHCWTRIGNNRNQEIINVLLAVKGNPNVD 315
           G++  P +I+ SN+  +T S   +TRI NN  QE+  +    K    VD
Sbjct: 559 GINAEPSNIEESNN--MTDS---FTRIANNTIQELYTLNNMYKPTREVD 602


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 410 AGATTLGMSTCVFGLKTTSS*LMLFT 487
           AGAT LG S     L+   + LM+F+
Sbjct: 577 AGATCLGSSIKAMWLRRALASLMVFS 602


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,721
Number of Sequences: 438
Number of extensions: 2907
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15459066
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)