Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0654
         (513 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   6.4  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   6.4  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    21   6.4  

>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 5/29 (17%), Positives = 17/29 (58%)
 Frame = -3

Query: 88  RCYLDYFPRTSKATFCLILLISFILVPNS 2
           +C++++ P+     +  ++ +S  ++P S
Sbjct: 171 QCWIEFHPQWKWQVYMTLVSLSLFIIPAS 199


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 6/21 (28%), Positives = 13/21 (61%)
 Frame = -3

Query: 73  YFPRTSKATFCLILLISFILV 11
           Y+P  +K   CL++++  + V
Sbjct: 39  YYPSLAKCYACLLMVVKILWV 59


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 10/34 (29%), Positives = 15/34 (44%)
 Frame = +2

Query: 26  NQ*NKTKCRLTSARKVIQVTSKYCVIKSSRGSQW 127
           N+ N+T C+    RK + V       +  R S W
Sbjct: 51  NKKNRTACKACRLRKCLLVGMSKSGSRYGRRSNW 84


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,249
Number of Sequences: 336
Number of extensions: 1874
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12258909
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)