Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0652
         (607 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT006862-1|AAP35508.1|  182|Homo sapiens core-binding factor, be...   152   8e-37
BC018509-1|AAH18509.1|  182|Homo sapiens core-binding factor, be...   152   8e-37
AF294326-1|AAG01553.1|  187|Homo sapiens core binding factor bet...   152   8e-37
L20298-1|AAA02868.1|  175|Homo sapiens transcription factor prot...   137   3e-32
AL445197-4|CAI15942.1|  166|Homo sapiens discoidin domain recept...    31   2.4  

>BT006862-1|AAP35508.1|  182|Homo sapiens core-binding factor, beta
           subunit protein.
          Length = 182

 Score =  152 bits (369), Expect = 8e-37
 Identities = 68/126 (53%), Positives = 92/126 (73%), Gaps = 8/126 (6%)
 Frame = +3

Query: 249 MPRVVPDQKAKFESDDLFKRLSRESEVRYTGYRDRPPEERQMRFMSGCREGHTEIAFTGT 428
           MPRVVPDQ++KFE+++ F++LSRE E++YTG+RDRP EERQ RF + CR+G +EIAF  T
Sbjct: 1   MPRVVPDQRSKFENEEFFRKLSRECEIKYTGFRDRPHEERQARFQNACRDGRSEIAFVAT 60

Query: 429 GTNLQLVFDHSPY--------NNRGCDFQKENGKAHIVSRFIMNGVCVRWRGWIDLERLD 584
           GTNL L F  + +        +    D ++E GK ++ +  I+NGVCV W+GWIDL+RLD
Sbjct: 61  GTNLSLQFFPASWQGEQRQTPSREYVDLEREAGKVYLKAPMILNGVCVIWKGWIDLQRLD 120

Query: 585 GAGCLE 602
           G GCLE
Sbjct: 121 GMGCLE 126


>BC018509-1|AAH18509.1|  182|Homo sapiens core-binding factor, beta
           subunit protein.
          Length = 182

 Score =  152 bits (369), Expect = 8e-37
 Identities = 68/126 (53%), Positives = 92/126 (73%), Gaps = 8/126 (6%)
 Frame = +3

Query: 249 MPRVVPDQKAKFESDDLFKRLSRESEVRYTGYRDRPPEERQMRFMSGCREGHTEIAFTGT 428
           MPRVVPDQ++KFE+++ F++LSRE E++YTG+RDRP EERQ RF + CR+G +EIAF  T
Sbjct: 1   MPRVVPDQRSKFENEEFFRKLSRECEIKYTGFRDRPHEERQARFQNACRDGRSEIAFVAT 60

Query: 429 GTNLQLVFDHSPY--------NNRGCDFQKENGKAHIVSRFIMNGVCVRWRGWIDLERLD 584
           GTNL L F  + +        +    D ++E GK ++ +  I+NGVCV W+GWIDL+RLD
Sbjct: 61  GTNLSLQFFPASWQGEQRQTPSREYVDLEREAGKVYLKAPMILNGVCVIWKGWIDLQRLD 120

Query: 585 GAGCLE 602
           G GCLE
Sbjct: 121 GMGCLE 126


>AF294326-1|AAG01553.1|  187|Homo sapiens core binding factor beta
           isoform PEBP2B protein.
          Length = 187

 Score =  152 bits (369), Expect = 8e-37
 Identities = 68/126 (53%), Positives = 92/126 (73%), Gaps = 8/126 (6%)
 Frame = +3

Query: 249 MPRVVPDQKAKFESDDLFKRLSRESEVRYTGYRDRPPEERQMRFMSGCREGHTEIAFTGT 428
           MPRVVPDQ++KFE+++ F++LSRE E++YTG+RDRP EERQ RF + CR+G +EIAF  T
Sbjct: 1   MPRVVPDQRSKFENEEFFRKLSRECEIKYTGFRDRPHEERQARFQNACRDGRSEIAFVAT 60

Query: 429 GTNLQLVFDHSPY--------NNRGCDFQKENGKAHIVSRFIMNGVCVRWRGWIDLERLD 584
           GTNL L F  + +        +    D ++E GK ++ +  I+NGVCV W+GWIDL+RLD
Sbjct: 61  GTNLSLQFFPASWQGEQRQTPSREYVDLEREAGKVYLKAPMILNGVCVIWKGWIDLQRLD 120

Query: 585 GAGCLE 602
           G GCLE
Sbjct: 121 GMGCLE 126


>L20298-1|AAA02868.1|  175|Homo sapiens transcription factor
           protein.
          Length = 175

 Score =  137 bits (331), Expect = 3e-32
 Identities = 61/119 (51%), Positives = 85/119 (71%), Gaps = 8/119 (6%)
 Frame = +3

Query: 270 QKAKFESDDLFKRLSRESEVRYTGYRDRPPEERQMRFMSGCREGHTEIAFTGTGTNLQLV 449
           Q++KFE+++ F++LSRE E++YTG+RDRP EERQ RF + CR+G +EIAF  TGTNL L 
Sbjct: 1   QRSKFENEEFFRKLSRECEIKYTGFRDRPHEERQARFQNACRDGRSEIAFVATGTNLSLQ 60

Query: 450 FDHSPY--------NNRGCDFQKENGKAHIVSRFIMNGVCVRWRGWIDLERLDGAGCLE 602
           F  + +        +    D ++E GK ++ +  I+NGVCV W+GWIDL+RLDG GCLE
Sbjct: 61  FFPASWQGEQRQTPSREYVDLEREAGKVYLKAPMILNGVCVIWKGWIDLQRLDGMGCLE 119


>AL445197-4|CAI15942.1|  166|Homo sapiens discoidin domain receptor
           family, member 2 protein.
          Length = 166

 Score = 31.5 bits (68), Expect = 2.4
 Identities = 18/54 (33%), Positives = 28/54 (51%)
 Frame = +3

Query: 195 MLPFDSIYEQPKPRFIFKMPRVVPDQKAKFESDDLFKRLSRESEVRYTGYRDRP 356
           + P    Y++P  R I K+P   P ++   E DD+  R+SRE   + +G  D P
Sbjct: 84  IFPLRPDYQEPS-RLIRKLPEFAPGEEESGE-DDVVGRVSREKPQQASGRYDTP 135


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,490,769
Number of Sequences: 237096
Number of extensions: 1816623
Number of successful extensions: 8743
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8738
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6410414940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)