Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0652
         (607 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40942-9|AAC47074.6|  703|Caenorhabditis elegans Synaptogenesis ...    29   2.6  
Z70752-5|CAA94758.1|  901|Caenorhabditis elegans Hypothetical pr...    28   4.5  
Z70750-16|CAA94750.1|  901|Caenorhabditis elegans Hypothetical p...    28   4.5  
AF024499-3|AAB70357.1|  374|Caenorhabditis elegans Hypothetical ...    28   4.5  

>U40942-9|AAC47074.6|  703|Caenorhabditis elegans Synaptogenesis
           abnormal protein 1 protein.
          Length = 703

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -1

Query: 265 GTTRGILKMNLGFGCS*IESKGNMPAN-GEGSLIACIT 155
           GTTRG +K+N+ FG   + +  +   N G+ +   C T
Sbjct: 343 GTTRGSIKLNVAFGARIMSTSQDKEVNEGDNAFFHCAT 380


>Z70752-5|CAA94758.1|  901|Caenorhabditis elegans Hypothetical
           protein F25B3.1 protein.
          Length = 901

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 17/52 (32%), Positives = 28/52 (53%)
 Frame = -2

Query: 156 PTAPIALLARNQTSLSARASLTQRYAMTQIIRIDVRTTTRPPASVPRAEFLQ 1
           P AP A +A N+ S S+RAS  ++ + T   R+D  +   P  ++    +LQ
Sbjct: 258 PAAP-APIATNRHSRSSRASTEEKASTTIEFRVDSNSRHVPVTAIATPYYLQ 308


>Z70750-16|CAA94750.1|  901|Caenorhabditis elegans Hypothetical
           protein F25B3.1 protein.
          Length = 901

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 17/52 (32%), Positives = 28/52 (53%)
 Frame = -2

Query: 156 PTAPIALLARNQTSLSARASLTQRYAMTQIIRIDVRTTTRPPASVPRAEFLQ 1
           P AP A +A N+ S S+RAS  ++ + T   R+D  +   P  ++    +LQ
Sbjct: 258 PAAP-APIATNRHSRSSRASTEEKASTTIEFRVDSNSRHVPVTAIATPYYLQ 308


>AF024499-3|AAB70357.1|  374|Caenorhabditis elegans Hypothetical
           protein F42G2.5 protein.
          Length = 374

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 14/38 (36%), Positives = 24/38 (63%)
 Frame = -2

Query: 129 RNQTSLSARASLTQRYAMTQIIRIDVRTTTRPPASVPR 16
           RN+T++S+ ASL + +A+ Q   ID +T   PP  + +
Sbjct: 179 RNETNVSSVASLPKNFALLQ--AIDQKTLRVPPLEIAK 214


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,862,953
Number of Sequences: 27780
Number of extensions: 291351
Number of successful extensions: 846
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 846
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)