Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0650
         (539 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   2.3  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   4.0  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   4.0  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   5.2  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   6.9  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       21   9.2  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   9.2  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   9.2  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   9.2  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 292 YWNVQKTGYYFDTEGG 245
           +W+V  TG + D  GG
Sbjct: 189 WWDVHSTGSWLDMSGG 204


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 10/27 (37%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
 Frame = -1

Query: 380 YYSTHNLSLRNAEWEAKT--LCNMHWN 306
           YY   N+  +NAE+  K     N H+N
Sbjct: 418 YYQNENMLQKNAEYSGKVGYYENNHYN 444


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 10/27 (37%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
 Frame = -1

Query: 380 YYSTHNLSLRNAEWEAKT--LCNMHWN 306
           YY   N+  +NAE+  K     N H+N
Sbjct: 366 YYQNENMLQKNAEYSGKVGYYENNHYN 392


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 511 IPRWHIDDTVHVYVT 467
           +PRW+I  T+ V +T
Sbjct: 37  VPRWYICYTIGVIIT 51


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -1

Query: 254 RRRNKTVVASVTKNILKRYYLPTSVW 177
           R   K  ++S+ K  LK+Y     +W
Sbjct: 35  REATKITLSSLAKGSLKQYTCELKLW 60


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +1

Query: 133 QKIKKKTNIFKHPYHH 180
           QKI+++T+   H +HH
Sbjct: 94  QKIEQQTHSSIHQHHH 109


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 178 GDTDV*RYLFFFLFSD 131
           GD+ +  Y+FFF  SD
Sbjct: 268 GDSYIVMYVFFFHLSD 283


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +1

Query: 133 QKIKKKTNIFKHPYHH 180
           QKI+++T+   H +HH
Sbjct: 245 QKIEQQTHSSIHQHHH 260


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +1

Query: 133 QKIKKKTNIFKHPYHH 180
           QKI+++T+   H +HH
Sbjct: 304 QKIEQQTHSSIHQHHH 319


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,813
Number of Sequences: 336
Number of extensions: 2399
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13201902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)