Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0649
(540 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p pro... 287 9e-78
AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal pr... 287 9e-78
AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA... 287 9e-78
AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE... 281 4e-76
AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB... 281 4e-76
AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD... 215 4e-56
AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC... 202 3e-52
BT024960-1|ABE01190.1| 458|Drosophila melanogaster IP15509p pro... 29 4.1
AE014298-1519|AAF47971.2| 458|Drosophila melanogaster CG1637-PB... 29 4.1
>BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p
protein.
Length = 465
Score = 287 bits (703), Expect = 9e-78
Identities = 126/176 (71%), Positives = 145/176 (82%)
Frame = +2
Query: 11 FSTPVMGLWELYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 190
FS P G YPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGS
Sbjct: 17 FSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGS 76
Query: 191 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 370
KINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY
Sbjct: 77 KINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKS 136
Query: 371 XXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIM 538
W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH+M
Sbjct: 137 KKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVM 192
>AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal
protein L3 protein.
Length = 416
Score = 287 bits (703), Expect = 9e-78
Identities = 126/176 (71%), Positives = 145/176 (82%)
Frame = +2
Query: 11 FSTPVMGLWELYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 190
FS P G YPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGS
Sbjct: 6 FSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGS 65
Query: 191 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 370
KINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY
Sbjct: 66 KINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKS 125
Query: 371 XXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIM 538
W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH+M
Sbjct: 126 KKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVM 181
>AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA,
isoform A protein.
Length = 416
Score = 287 bits (703), Expect = 9e-78
Identities = 126/176 (71%), Positives = 145/176 (82%)
Frame = +2
Query: 11 FSTPVMGLWELYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 190
FS P G YPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGS
Sbjct: 6 FSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGS 65
Query: 191 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 370
KINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY
Sbjct: 66 KINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKS 125
Query: 371 XXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIM 538
W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH+M
Sbjct: 126 KKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVM 181
>AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE,
isoform E protein.
Length = 403
Score = 281 bits (689), Expect = 4e-76
Identities = 122/165 (73%), Positives = 141/165 (85%)
Frame = +2
Query: 44 YPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIVEAV 223
YPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+VEAV
Sbjct: 4 YPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVVEAV 63
Query: 224 TIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXXXXX 403
T++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY
Sbjct: 64 TVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKASKK 123
Query: 404 WQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIM 538
W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH+M
Sbjct: 124 WTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVM 168
>AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB,
isoform B protein.
Length = 403
Score = 281 bits (689), Expect = 4e-76
Identities = 122/165 (73%), Positives = 141/165 (85%)
Frame = +2
Query: 44 YPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIVEAV 223
YPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+VEAV
Sbjct: 4 YPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVVEAV 63
Query: 224 TIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXXXXX 403
T++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY
Sbjct: 64 TVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKASKK 123
Query: 404 WQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIM 538
W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH+M
Sbjct: 124 WTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVM 168
>AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD,
isoform D protein.
Length = 161
Score = 215 bits (524), Expect = 4e-56
Identities = 94/118 (79%), Positives = 103/118 (87%)
Frame = +2
Query: 11 FSTPVMGLWELYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 190
FS P G YPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGS
Sbjct: 6 FSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGS 65
Query: 191 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWY 364
KINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY
Sbjct: 66 KINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWY 123
>AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC,
isoform C protein.
Length = 125
Score = 202 bits (492), Expect = 3e-52
Identities = 88/105 (83%), Positives = 97/105 (92%)
Frame = +2
Query: 44 YPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIVEAV 223
YPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+VEAV
Sbjct: 4 YPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVVEAV 63
Query: 224 TIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKN 358
T++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKN
Sbjct: 64 TVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKN 108
>BT024960-1|ABE01190.1| 458|Drosophila melanogaster IP15509p
protein.
Length = 458
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 32 LWELYPKKRSRRHRGKVKAFPKDDPSKPVHL-TAFIGYKAG 151
LW +Y K G +K P +DPS PVH+ T G K G
Sbjct: 360 LWPIYDYKV---RNGTLKDSPYNDPSAPVHIVTGSAGCKEG 397
>AE014298-1519|AAF47971.2| 458|Drosophila melanogaster CG1637-PB,
isoform B protein.
Length = 458
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 32 LWELYPKKRSRRHRGKVKAFPKDDPSKPVHL-TAFIGYKAG 151
LW +Y K G +K P +DPS PVH+ T G K G
Sbjct: 360 LWPIYDYKV---RNGTLKDSPYNDPSAPVHIVTGSAGCKEG 397
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,255,972
Number of Sequences: 53049
Number of extensions: 540474
Number of successful extensions: 1324
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1324
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2053700352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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