Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0648
         (570 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    23   1.4  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    22   3.2  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    22   3.2  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   5.6  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   7.4  

>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +2

Query: 188 LVGLPARGKSQLAHRLARHLNWNGESTKVFDCSE 289
           +VGLPA   S + H L    + N +  K  +CS+
Sbjct: 247 VVGLPAPTSSIMMHHLVNPQSLNHQEVKA-ECSD 279


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = -1

Query: 339 ARKMSWLPYKAICRRRYSLQSNTLVLSPFQLRCLA 235
           A  +SW    A+CR     +   L LS F L C++
Sbjct: 114 ASTVSWYAGDAMCRIMMFFRMFGLYLSSFILVCIS 148


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = -1

Query: 339 ARKMSWLPYKAICRRRYSLQSNTLVLSPFQLRCLA 235
           A  +SW    A+CR     +   L LS F L C++
Sbjct: 114 ASTVSWYAGDAMCRIMMFFRMFGLYLSSFILVCIS 148


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = -3

Query: 127 KFLFVLHHCRGPC*IPGAITILLYEGLLAKATTCFV 20
           K+  +L+ CR    +  AI  +LY  + +K  T F+
Sbjct: 328 KYYNILYFCRIMVYLNSAINPILYNLMSSKFRTGFI 363


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 8/25 (32%), Positives = 10/25 (40%)
 Frame = +3

Query: 237 PDISTGMEKAPKCSIAASIVAGIWP 311
           PD        P C +  S  A +WP
Sbjct: 41  PDTEATGLSLPACRLFCSEAAALWP 65


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,152
Number of Sequences: 336
Number of extensions: 2763
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14099535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)