Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0648
(570 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB17E12.14c |||6-phosphofructo-2-kinase |Schizosaccharomyces ... 85 5e-18
SPAC144.17c |||6-phosphofructo-2-kinase|Schizosaccharomyces pomb... 84 2e-17
SPAC222.13c |||6-phosphofructo-2-kinase |Schizosaccharomyces pom... 83 2e-17
SPAC732.02c |||fructose-2,6-bisphosphate 2-phosphatase activity ... 51 1e-07
SPBC3B9.03 |||signal recognition particle receptor alpha subunit... 31 0.12
SPCC74.02c |||mRNA cleavage and polyadenylation specificity fact... 31 0.16
SPAC23E2.01 |fep1|gaf2|iron-sensing transcription factor Fep1|Sc... 29 0.36
SPAC19B12.02c |||1,3-beta-glucanosyltransferase|Schizosaccharomy... 28 1.1
SPBC16H5.07c |ppa2||serine/threonine protein phosphatase Ppa2|Sc... 27 2.6
SPBC17F3.01c |rga5|SPBC557.01|GTPase activating protein Rga5|Sch... 26 3.4
SPAC26H5.11 |||spore wall assembly protein |Schizosaccharomyces ... 26 3.4
SPBC2F12.03c |||EST1 family protein|Schizosaccharomyces pombe|ch... 26 4.5
SPAC1A6.10 ||SPAC30D11.15c|Moeb/ThiF domain|Schizosaccharomyces ... 26 4.5
SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces p... 25 5.9
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 25 5.9
>SPAPB17E12.14c |||6-phosphofructo-2-kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 474
Score = 85.4 bits (202), Expect = 5e-18
Identities = 44/130 (33%), Positives = 73/130 (56%), Gaps = 4/130 (3%)
Frame = +2
Query: 188 LVGLPARGKSQLAHRLARHLNWNGESTKVFDCSEYRRRHMALYGSHD---IFRADNQQGS 358
+VGLPARGKS + ++L R+ NW + K F+ +RR+H + SHD F N++ S
Sbjct: 1 MVGLPARGKSYIVNKLVRYYNWLQYNCKAFNVGNFRRKHAS--HSHDDASFFDPSNEEAS 58
Query: 359 AIRRQSAHEAVQDAVIWLKDGNS-VAIFDVTNITREQRRELSDYCLSDMGFRILFIECVC 535
+R A + + + W ++ + V IFD TN T ++R+ + D+ LFIE +C
Sbjct: 59 KLRESFAMDTLDALLQWFEEEDGVVGIFDATNSTSKRRKAIVDHLSKVPYVTTLFIESIC 118
Query: 536 EDQELLERNI 565
D++L+ N+
Sbjct: 119 NDEQLIAANM 128
>SPAC144.17c |||6-phosphofructo-2-kinase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 83.8 bits (198), Expect = 2e-17
Identities = 54/170 (31%), Positives = 85/170 (50%), Gaps = 3/170 (1%)
Frame = +2
Query: 65 NSNGARDLARATAMMEDKEKL--LAPATIRSRRISQFAPLLIALVGLPARGKSQLAHRLA 238
N N R R++ + D EK + P + S + L+I + GLPARGKS +A +
Sbjct: 14 NPNMLRAANRSSEALLDNEKFGGVQPYSTESGMLFHAGKLVIIMSGLPARGKSNIAVSID 73
Query: 239 RHLNWNGESTKVFDCSEYRRRHMALYGSHDIFRADNQQGSAIRRQSAHEAVQDAVIW-LK 415
R+L W G + + + ++Y S + A ++ R + + D I+ LK
Sbjct: 74 RYLRWLGFNCRFYSLAKYIDERTREMTSSPVKSAASENHVFSRNDTIERCLADLEIFLLK 133
Query: 416 DGNSVAIFDVTNITREQRRELSDYCLSDMGFRILFIECVCEDQELLERNI 565
+ VAI+D TN TR RR L D + GF+ILFIE +C ++++ NI
Sbjct: 134 EKGQVAIYDATNGTRRTRRILYDR-FKNCGFKILFIESLCNKEDVINANI 182
>SPAC222.13c |||6-phosphofructo-2-kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 592
Score = 83.4 bits (197), Expect = 2e-17
Identities = 48/133 (36%), Positives = 69/133 (51%), Gaps = 3/133 (2%)
Frame = +2
Query: 176 LLIALVGLPARGKSQLAHRLARHLNWNGESTKVFDCSEYRRRHMA-LYG-SHDIFRADNQ 349
L+I LVG+PA GKS + +L+R+ NW + + F + RR A Y S D F N+
Sbjct: 144 LIIILVGIPATGKSYIGSKLSRYYNWLKYNCRFFSVGDKRREEGASTYSMSADFFDIKNE 203
Query: 350 QGSAIRRQSAHEAVQDAVIWLKDGNSV-AIFDVTNITREQRRELSDYCLSDMGFRILFIE 526
+ R A E ++D + W+ N V I D TN T E+R+ L D + I+F+E
Sbjct: 204 ETFKFRENVALETLEDLLHWMIHENGVIGILDATNSTHERRKHLYDRISKEADIGIMFLE 263
Query: 527 CVCEDQELLERNI 565
+C D L E NI
Sbjct: 264 SLCTDDILFEENI 276
>SPAC732.02c |||fructose-2,6-bisphosphate 2-phosphatase activity
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 408
Score = 51.2 bits (117), Expect = 1e-07
Identities = 33/130 (25%), Positives = 59/130 (45%)
Frame = +2
Query: 176 LLIALVGLPARGKSQLAHRLARHLNWNGESTKVFDCSEYRRRHMALYGSHDIFRADNQQG 355
L + VGLPA GK+ A +L+R+L W ST ++D E + + N
Sbjct: 10 LCVCFVGLPASGKTSSAMKLSRYLTWMSVSTHLYDTKEI---------DNSLSENSNSDS 60
Query: 356 SAIRRQSAHEAVQDAVIWLKDGNSVAIFDVTNITREQRRELSDYCLSDMGFRILFIECVC 535
+ + + + K G VAI D T + R+ + + + ++F+E VC
Sbjct: 61 ENLAK-TLSPIFDNLESVFKKGTDVAILDFNQCTLKFRKSIVELAKA-RNMLLMFVEVVC 118
Query: 536 EDQELLERNI 565
+Q++++ NI
Sbjct: 119 TNQKIIDENI 128
>SPBC3B9.03 |||signal recognition particle receptor alpha subunit
Srp101|Schizosaccharomyces pombe|chr 2|||Manual
Length = 547
Score = 31.1 bits (67), Expect = 0.12
Identities = 25/91 (27%), Positives = 41/91 (45%)
Frame = +2
Query: 92 RATAMMEDKEKLLAPATIRSRRISQFAPLLIALVGLPARGKSQLAHRLARHLNWNGESTK 271
R T ++ L +IRS R ++ P I+L+G+ GKS ++A L N
Sbjct: 315 RLTQILTPSTSLDLLHSIRSVRKNENRPYTISLIGVNGVGKSTTLAKIAYWLLSNNFRIL 374
Query: 272 VFDCSEYRRRHMALYGSHDIFRADNQQGSAI 364
V C +R + G H + + +GS+I
Sbjct: 375 VAACDTFRSGAIEQLGVH-VKNLQSLKGSSI 404
>SPCC74.02c |||mRNA cleavage and polyadenylation specificity factor
complex associated protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 710
Score = 30.7 bits (66), Expect = 0.16
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +1
Query: 115 QRETSSTRNDPLASYQSICAAPHSPGWSASSWQESAGTPTCQTSQLEWRK 264
+ E SST+ND S ++ AP P + S+ + + + T ++S + +K
Sbjct: 338 ENEKSSTKNDSTVSSSAVVMAPAGPAMAPSASNKPSASSTTKSSNSKSKK 387
>SPAC23E2.01 |fep1|gaf2|iron-sensing transcription factor
Fep1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 564
Score = 29.5 bits (63), Expect = 0.36
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +1
Query: 115 QRETSSTRNDPLASYQSICAAPHSPGWSASSWQESAGTPTCQTSQLEWRKH 267
Q E SS ++P ++ CA ++P W ++ +G P C L ++ H
Sbjct: 157 QHEDSSPPHEPSVTFCQNCATTNTPLWR----RDESGNPICNACGLYYKIH 203
>SPAC19B12.02c |||1,3-beta-glucanosyltransferase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 542
Score = 27.9 bits (59), Expect = 1.1
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = -1
Query: 447 VTSNIATLFPSLS-QMTASCTASCAL*RRIADPCWLSARKMSWLPYKAICRRRYSLQS 277
++S A++ PS S + T S T + + + + W++A + P +A+C S +S
Sbjct: 318 LSSRYASVIPSASYESTMSATLTATMSCQATNSAWMAATSLPPTPSEAVCECMDSTRS 375
>SPBC16H5.07c |ppa2||serine/threonine protein phosphatase
Ppa2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 26.6 bits (56), Expect = 2.6
Identities = 13/42 (30%), Positives = 16/42 (38%)
Frame = +2
Query: 326 DIFRADNQQGSAIRRQSAHEAVQDAVIWLKDGNSVAIFDVTN 451
DI N AH+ V + W DG+ V IF N
Sbjct: 236 DISETFNHANGLSLTARAHQLVMEGFNWAHDGDVVTIFSAPN 277
>SPBC17F3.01c |rga5|SPBC557.01|GTPase activating protein
Rga5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 361
Score = 26.2 bits (55), Expect = 3.4
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 145 PLASYQSICAAPHSPGWSAS-SWQESAGTPTCQTS 246
PL+S + AAP SP S++ Q +A TP TS
Sbjct: 249 PLSSLPPLVAAPTSPNTSSTLITQSAAPTPIASTS 283
>SPAC26H5.11 |||spore wall assembly protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 965
Score = 26.2 bits (55), Expect = 3.4
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +2
Query: 461 EQRRELSDYCLSDMGFRILFIECVCEDQELLERNI 565
E++REL ++D + +E VC +++ ERNI
Sbjct: 670 ERKRELDMLTIADSFLDLSRVESVCPVEDVEERNI 704
>SPBC2F12.03c |||EST1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 891
Score = 25.8 bits (54), Expect = 4.5
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = -1
Query: 369 RRIADPCWLSARKMSWLPYKAICRRRYSLQSNTLVL 262
+R + WL AR+ W +C++ SL T+++
Sbjct: 88 KRNKEALWLRARQKKWKEIFELCQKITSLLGGTILI 123
>SPAC1A6.10 ||SPAC30D11.15c|Moeb/ThiF domain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 485
Score = 25.8 bits (54), Expect = 4.5
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Frame = +1
Query: 148 LASYQSICAAPHSPGWSA--SSW--QESAGTPTCQT-SQLEWRKHQSV-RLQRVSSPAYG 309
L + SI A P W S W S+ T C LE+RKH+S+ RLQ + P G
Sbjct: 11 LFDFTSIMAGFKVPSWITYKSFWIAVSSSVTTACVILGTLEFRKHRSIRRLQSMIVPEAG 70
>SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 704
Score = 25.4 bits (53), Expect = 5.9
Identities = 27/81 (33%), Positives = 38/81 (46%)
Frame = +2
Query: 278 DCSEYRRRHMALYGSHDIFRADNQQGSAIRRQSAHEAVQDAVIWLKDGNSVAIFDVTNIT 457
DC +RRR+ L GS + QQ S +RR A I L + + I D + +
Sbjct: 594 DCPYWRRRYFQLIGSKLV---AFQQFSKVRR---------ATIDLSE--ATHIVDDNHYS 639
Query: 458 REQRRELSDYCLSDMGFRILF 520
E+ EL Y + GFRI+F
Sbjct: 640 DEE--ELEGYLYFESGFRIIF 658
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 25.4 bits (53), Expect = 5.9
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = -3
Query: 208 TSWQTNQGYEERRKLTDTTRADRCGC*KFLFVLHHC 101
T N ++ RKL D + D+ G K + ++HC
Sbjct: 789 THCSVNHLVQQIRKLKDENKKDQSGTDKLMKKIYHC 824
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,276,944
Number of Sequences: 5004
Number of extensions: 43709
Number of successful extensions: 160
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 156
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 242064240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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